LOC122343101


Basic Information

Item Value
gene id LOC122343101
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22685702 ~ 22689679 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237428.1
GCCGAAAAAAggtgtgtgcttttattaatttaaaagcgTTTAAATCAATGTGACACGTGCAGAAAATTAGACATAACCCGTGCGGCTCGATAGCTTAAAGCAACACTTGAATGTTTTATCTGGTGACTTTAAGGACGAGGAATCATCTGAGATCCATGTGACACAACGTTATAACGATGGTGTTTATTAAAAAGGAGACTGAAGACGTGAAGATTGAAGAAACCTTTGGAGTCGAACACGGAGATGctgaggaacaaagaaagatGGTGTTCATTAAAGTGGAGAGTGAAGAGATGAAGATTGAAGTCAAACATGAAGATACCgaggaacaaacagACCTGATGAGTGGAGAACTCATTGAAAAGGAAGATAAAGATCGGCACGAGAAACCTAATTTCACGTTTAGTTGCTCACAGACCGAAAAGACGTCCTCGCAAGAAAGAGCTCAAAAGGCTAGAAGTGCGGGTCActtcacctgccaacagtgtggaaaacaTTTCAACAGGAGAGGAAACCTCAATTaccacatgagaattcacaccggagaaaaGCCTCACACGTGCCCTCAGTGCGGGACGAGTTTCACTCAAAAAGTGATCCTCGATAGGCACATTAGAGGCCACACCGGAGAGAGGCCCTACAGCTGCAAGCTGTGCGGAAAGAATTTAATGCGGAAAGCAAACCTCAAAAACCACATGAGAATTCATACCGGAGAGCAGCCCTACACCTGCCCGCAGTGCACGAGGACTTTCCTACATCAGCAAACTCTCAAGTACCACATGAGGACTCACAACGGAGAGAAACCCTTCGCCTGCCCTCACTGTGGAAAGAGCTTCGCCGGAAGAGGAAACCTCGTGGTCCACACAAGGATTCACACGGGAGAAAACCCGTTCACCTGCCCACAGTGTGGGAAAGGTTTCTCTCAGAAAGGAAACCTCAAAAGACACATGAATGCACACTGAAAAGAAGCTGTGAGAGGTTGCTCCACAGACACTTCATTGCAGTTCATTGATCTGCAGCGGGACAATGTTATGTTTACAGTGATTGTCCATAATGTCTATCTTAGATAGAGGGTATCCCTTAGATATGCACATTTGGTTTCTTCTTGCATTTGcgtgtagattttttttttctttctcacgacaaaaaaagcattcaagCCACCGTTTATTCTCAGTGAAACTGTCCGACTCTTCACAACTATATCGTGTGAGGCCTCACGTGCAAAATTATCTATtcgatttttaaaatctgtcatatattctgtaaaaatCTGACATGGAATGTTAATAATATCTGCTAAGTTGGCTAATGGCTTGTCACTGTAATGAAATGGAGTCACGATCATGATAGTTGCTACAATTGTTGAGAAATATAATGTAGCAATTCGGTATCTGCgctatttttcataatattagtCCCGAGTCATTTCTGTGTGGAATATGATCTAAGGAATCAACTTACATATGCATATGTCATAAGGTGCTGTTTGAAAGGCCATGATTTTGTGTATTGGCTGTAACAGAATATGTCGACATGCTTTAAcattcaaaaaacataatttttcaaGTACTGTACATTAAAGTAGCTCCTCTGCCCCGCCTCTCTCAAACGCGTCATTTTCTACAAAGCCCCTCTTTCCGATATGCACAGTCTGCTATGATTGGCCAGTTCacacagtgcattgtgatttGGACAAACACCAGCTCTGCTAACCCCAAGCCTACTTTCACAGATGTTTCAGGAGTTTAGGCTAATTTGATAACTGGTTTGGATTCAATTCAAATTTCTATTTGGGTTTATGCatgtattctttaaaatgttaactgtTTGTTGTCATAGCTAtgcaaagatttaatttaaaaaaaaaaaaaaaacagtatcatagCTATTAAAGTACATCTCATGATTACAAATCTATTCAATCACAAAGTAAAAAGAGCTGCTAAAGTGGTAGATGgggtttaaaatgtaattatcagcaactgtaattagttacatttagtcatttaattatGCAACGTCATTACATGTAACTAGTGCAGATGAACTAGTTCATGAATGCATAACCTTAACACTGGTCTACTGTAATGCATGTACTTCACTAGAAAAGCTACAGTTAGTCCAAAATTCAGCAAAGCattcacataaaatatatatcataacCTTATACTCCAGTTTTTAAGAAACAgtaagccaggttaaagagattcatttttaatctccatttaaaatgacaaagtgTGTCTGCCCCCCTGAACAGTGTTAGGTAGATTGTTTTAGAGTTTGGATGCTAAATAAGTCAaggagttttgagaacgcatcAGACATGAAGGCATATAATGTGATAAAAGCTTGCCCAAGTactagctgctgcattttgggcAGGTTAGACTTTA
>XM_043237429.1
GTCACCAGGCCGCGCCGCTCTCCCGCGTCTGTGATTCTGCCGAAAAAAgGAATCATCTGAGATCCATGTGACACAACGTTATAACGATGGTGTTTATTAAAAAGGAGACTGAAGACGTGAAGATTGAAGAAACCTTTGGAGTCGAACACGGAGATGctgaggaacaaagaaagatGGTGTTCATTAAAGTGGAGAGTGAAGAGATGAAGATTGAAGTCAAACATGAAGATACCgaggaacaaacagACCTGATGAGTGGAGAACTCATTGAAAAGGAAGATAAAGATCGGCACGAGAAACCTAATTTCACGTTTAGTTGCTCACAGACCGAAAAGACGTCCTCGCAAGAAAGAGCTCAAAAGGCTAGAAGTGCGGGTCActtcacctgccaacagtgtggaaaacaTTTCAACAGGAGAGGAAACCTCAATTaccacatgagaattcacaccggagaaaaGCCTCACACGTGCCCTCAGTGCGGGACGAGTTTCACTCAAAAAGTGATCCTCGATAGGCACATTAGAGGCCACACCGGAGAGAGGCCCTACAGCTGCAAGCTGTGCGGAAAGAATTTAATGCGGAAAGCAAACCTCAAAAACCACATGAGAATTCATACCGGAGAGCAGCCCTACACCTGCCCGCAGTGCACGAGGACTTTCCTACATCAGCAAACTCTCAAGTACCACATGAGGACTCACAACGGAGAGAAACCCTTCGCCTGCCCTCACTGTGGAAAGAGCTTCGCCGGAAGAGGAAACCTCGTGGTCCACACAAGGATTCACACGGGAGAAAACCCGTTCACCTGCCCACAGTGTGGGAAAGGTTTCTCTCAGAAAGGAAACCTCAAAAGACACATGAATGCACACTGAAAAGAAGCTGTGAGAGGTTGCTCCACAGACACTTCATTGCAGTTCATTGATCTGCAGCGGGACAATGTTATGTTTACAGTGATTGTCCATAATGTCTATCTTAGATAGAGGGTATCCCTTAGATATGCACATTTGGTTTCTTCTTGCATTTGcgtgtagattttttttttctttctcacgacaaaaaaagcattcaagCCACCGTTTATTCTCAGTGAAACTGTCCGACTCTTCACAACTATATCGTGTGAGGCCTCACGTGCAAAATTATCTATtcgatttttaaaatctgtcatatattctgtaaaaatCTGACATGGAATGTTAATAATATCTGCTAAGTTGGCTAATGGCTTGTCACTGTAATGAAATGGAGTCACGATCATGATAGTTGCTACAATTGTTGAGAAATATAATGTAGCAATTCGGTATCTGCgctatttttcataatattagtCCCGAGTCATTTCTGTGTGGAATATGATCTAAGGAATCAACTTACATATGCATATGTCATAAGGTGCTGTTTGAAAGGCCATGATTTTGTGTATTGGCTGTAACAGAATATGTCGACATGCTTTAAcattcaaaaaacataatttttcaaGTACTGTACATTAAAGTAGCTCCTCTGCCCCGCCTCTCTCAAACGCGTCATTTTCTACAAAGCCCCTCTTTCCGATATGCACAGTCTGCTATGATTGGCCAGTTCacacagtgcattgtgatttGGACAAACACCAGCTCTGCTAACCCCAAGCCTACTTTCACAGATGTTTCAGGAGTTTAGGCTAATTTGATAACTGGTTTGGATTCAATTCAAATTTCTATTTGGGTTTATGCatgtattctttaaaatgttaactgtTTGTTGTCATAGCTAtgcaaagatttaatttaaaaaaaaaaaaaaaacagtatcatagCTATTAAAGTACATCTCATGATTACAAATCTATTCAATCACAAAGTAAAAAGAGCTGCTAAAGTGGTAGATGgggtttaaaatgtaattatcagcaactgtaattagttacatttagtcatttaattatGCAACGTCATTACATGTAACTAGTGCAGATGAACTAGTTCATGAATGCATAACCTTAACACTGGTCTACTGTAATGCATGTACTTCACTAGAAAAGCTACAGTTAGTCCAAAATTCAGCAAAGCattcacataaaatatatatcataacCTTATACTCCAGTTTTTAAGAAACAgtaagccaggttaaagagattcatttttaatctccatttaaaatgacaaagtgTGTCTGCCCCCCTGAACAGTGTTAGGTAGATTGTTTTAGAGTTTGGATGCTAAATAAGTCAaggagttttgagaacgcatcAGACATGAAGGCATATAATGTGATAAAAGCTTGCCCAAGTactagctgctgcattttgggcAGGTTAGACTTTA

Function

GO: NA

KEGG:

id description
ko00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237428.1 True 2399 mRNA 0.40 3 22685740 22689679
XM_043237429.1 False 2309 mRNA 0.40 3 22685702 22689679

Neighbor

gene id symbol gene type direction distance location
LOC122342965 NA coding upstream 63816 22613115 ~ 22621886 (+)
LOC122343138 si:ch211-133h13.1,LOC107574515,LOC107574820 coding upstream 123939 22548617 ~ 22561763 (+)
LOC122343018 LOC107705900 coding upstream 239424 22434054 ~ 22446278 (+)
LOC122342312 NA coding upstream 279880 22404053 ~ 22405822 (+)
LOC122343041 zbtb24,LOC107736039 coding upstream 578245 22105236 ~ 22107457 (+)
LOC122342996 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding downstream 6121 22695800 ~ 22706494 (+)
LOC122342997 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding downstream 50281 22739960 ~ 22748620 (+)
LOC122343008 LOC107575457 coding downstream 478476 23168155 ~ 23183546 (+)
LOC122343131 NA coding downstream 536532 23226211 ~ 23229732 (+)
LOC122343152 NA coding downstream 662248 23351927 ~ 23375871 (+)
LOC122343204 NA non-coding upstream 134352 22550101 ~ 22551350 (+)
LOC122343169 NA non-coding upstream 141871 22542511 ~ 22543831 (+)
LOC122343193 NA non-coding upstream 144217 22540384 ~ 22541485 (+)
G30528 LOC107574372,LOC107655767,LOC107710146,LOC107574376,LOC107571418,LOC107574588 non-coding upstream 152670 22532415 ~ 22533032 (+)
G30526 NA non-coding upstream 179510 22505255 ~ 22506192 (+)
G30598 NA non-coding downstream 114359 22804038 ~ 23246017 (+)
G30599 LOC107561645 non-coding downstream 118309 22807988 ~ 23249868 (+)
G30607 NA non-coding downstream 163802 22853481 ~ 22869703 (+)
G30609 NA non-coding downstream 168611 22858290 ~ 22861570 (+)
G30624 NA non-coding downstream 317295 23006974 ~ 23126523 (+)
LOC122343019 LOC107705900 other upstream 2990 22661826 ~ 22682712 (+)
LOC122342310 LOC107685875,LOC107671223,LOC107749047,LOC107728228,LOC107576424 other upstream 380554 22296897 ~ 22305148 (+)
G30218 LOC106676322,LOC106676931,LOC106676323,LOC107752219,LOC106675762,LOC106674878,LOC106676183 other upstream 453778 22231470 ~ 22231924 (+)
LOC122342301 LOC107563870,LOC107718524,LOC107683800,LOC107564010,LOC107563545 other upstream 924521 21368643 ~ 21761181 (+)
LOC122342317 NA other downstream 88304 22777983 ~ 22780139 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other downstream 439427 23129106 ~ 23130189 (+)
G30632 NA other downstream 467880 23157559 ~ 23159756 (+)
LOC122342321 LOC107741609,LOC107575420,LOC107710255 other downstream 474016 23163695 ~ 23168007 (+)
LOC122342976 usp15,LOC107685889 other downstream 1427610 24117289 ~ 24131487 (+)

Expression


Co-expression Network