LOC122343104


Basic Information

Item Value
gene id LOC122343104
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24667706 ~ 24672151 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237436.1
caatcacagtcgAGTAGGGTCGggatggaccaatcacagtcCGGATAGTGTTCTCGAGCGTCTACACTCGAgagaaaaaactgttttgatttAGTCTCCTGAAAAAACGAAGCACAACTTTTTGAAGCACAGCTTCTGTCTTATCGGTCCGTAGGAGGATGTCTCAGACGGTCATACCCGTGACGTCTTCAACCCTCGTCATCCAGCTGCAGCCGACGACGCACACCACCGCTGTCCCGCCGCTCCCCGCCGCTCCTGCTGCTCCTCTTCAGGGCCTTCAGGCGTTTCTGAAAGGACAACCCAAAGCCCTCGGGACGGTCCAGGTAATGATCGGCGTGATGACTCTTCTGTTTGGCATCGTGTCTTCAGTTCACGCAGAACCCATCTTTATCTACAGTGGTCTTTCGTACTGGGGATCTCTCATCTACATCAGCGCGGGTTCACTCTGCATCGCCGccgaaaacaaaatgaattccCGCTCTGGTTTGTGTTTGGTGAGGGCTTCCCTTGGAATGAACATCTTCAGCGCTATAACCGCCGGCATTGccatcattttacttttaatagatTTGGTTATAGCAGCGTTGAATTACTGCGGTGATTTTGACTGTTATTTGAACATCAAGTATGAGACTCTCTTAAAGGGAATCAGAGGTGTGTTGCTGATATTCTCCGTGCTTGAGTTCATcatctccatctgtctgtcagcGTTCGCCTGTAAAGCCGACGCCTGCTGCTGTCCTCCTCAGGTGCAGTTTGCTCAGGTTTTACCTCCACAGTCGTCTGATGTGGTTCGTTTCCAGGATCTGAACAGATCAGAGaTACCCGTGACCAGCAGCTCTTTCATTCATCAACATCCTGCAGACGTTCCTCCTCAATACACTGAAAGCAAatatgaataagtgttccctcaAAAAAAATAAGGGAACGTACAGGACAtgttcaaaaaatacatttccttaCATGAGAAACTATACTGAAGTATATTCATGGACCAagtatgaatataatttgaGAAATTTAAAAGTACATGTCAAACCTGCAGTACATTTTTACAAGAAacagctaaaaatgtaaaaactaaatttctccttgttttatatagctgaaaacattcataaacatttctatcactttgtaatatatcactataatatacatatatatttttctaggctgtgtttgtgtgtatacactTCAAACTATCATACTGTATCAAAtctacatattataaatacattaagtaaatatatatttgctcgTCCTGCTCTGATatacattaaagggatagttcacccaaaaa
>XM_043237437.1
acagtcCGGATAGTGTTCTCGAGCGTCTACACTCGAgagaaaaaactgttttgatttAGTCTCCTGAAAAAACGAAGCACAACTTTTTGAAGCACAGCTTCTGTCTTATCGCGACCCGAACGTTGAGGCCGCTACCACATGAACCCGGGCTTCAGTATCTCCTCGGCGGTGACCGCCTCCATGTTTTTGGTTCTGTTCAGGTCCGTAGGAGGATGTCTCAGACGGTCATACCCGTGACGTCTTCAACCCTCGTCATCCAGCTGCAGCCGACGACGCACACCACCGCTGTCCCGCCGCTCCCCGCCGCTCCTGCTGCTCCTCTTCAGGGCCTTCAGGCGTTTCTGAAAGGACAACCCAAAGCCCTCGGGACGGTCCAGGTAATGATCGGCGTGATGACTCTTCTGTTTGGCATCGTGTCTTCAGTTCACGCAGAACCCATCTTTATCTACAGTGGTCTTTCGTACTGGGGATCTCTCATCTACATCAGCGCGGGTTCACTCTGCATCGCCGccgaaaacaaaatgaattccCGCTCTGGTTTGTGTTTGGTGAGGGCTTCCCTTGGAATGAACATCTTCAGCGCTATAACCGCCGGCATTGccatcattttacttttaatagatTTGGTTATAGCAGCGTTGAATTACTGCGGTGATTTTGACTGTTATTTGAACATCAAGTATGAGACTCTCTTAAAGGGAATCAGAGGTGTGTTGCTGATATTCTCCGTGCTTGAGTTCATcatctccatctgtctgtcagcGTTCGCCTGTAAAGCCGACGCCTGCTGCTGTCCTCCTCAGGTGCAGTTTGCTCAGGTTTTACCTCCACAGTCGTCTGATGTGGTTCGTTTCCAGGATCTGAACAGATCAGAGaTACCCGTGACCAGCAGCTCTTTCATTCATCAACATCCTGCAGACGTTCCTCCTCAATACACTGAAAGCAAatatgaataagtgttccctcaAAAAAAATAAGGGAACGTACAGGACAtgttcaaaaaatacatttccttaCATGAGAAACTATACTGAAGTATATTCATGGACCAagtatgaatataatttgaGAAATTTAAAAGTACATGTCAAACCTGCAGTACATTTTTACAAGAAacagctaaaaatgtaaaaactaaatttctccttgttttatatagctgaaaacattcataaacatttctatcactttgtaatatatcactataatatacatatatatttttctaggctgtgtttgtgtgtatacactTCAAACTATCATACTGTATCAAAtctacatattataaatacattaagtaaatatatatttgctcgTCCTGCTCTGATatacattaaagggatagttcacccaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237436.1 False 1303 mRNA 0.43 8 24667706 24672151
XM_043237437.1 True 1357 mRNA 0.43 8 24667741 24672151

Neighbor

gene id symbol gene type direction distance location
LOC122343093 NA coding upstream 2130 24661829 ~ 24665576 (+)
LOC122343105 NA coding upstream 14491 24648967 ~ 24653215 (+)
LOC122342946 NA coding upstream 48315 24607037 ~ 24619391 (+)
LOC122342982 NA coding upstream 61889 24595853 ~ 24605817 (+)
LOC122343010 NA coding upstream 85912 24577163 ~ 24581794 (+)
LOC122342991 LOC107685875,LOC107570416,LOC107671223,LOC107749047,LOC107728228,LOC107569032 coding downstream 7771 24679922 ~ 24687980 (+)
LOC122342420 LOC107667978,LOC107563545 coding downstream 98481 24770632 ~ 24782341 (+)
zmp:0000000926 LOC107754864,LOC107661991,LOC107568831,LOC104958731 coding downstream 845245 25517396 ~ 25553833 (+)
l1camb LOC107661992,LOC107746188,LOC107598812,LOC107568828 coding downstream 900926 25573077 ~ 25609845 (+)
lsm14b lsm14b,LOC107748998,LOC107569639 coding downstream 959210 25631361 ~ 25634808 (+)
G30812 NA non-coding upstream 180819 24456022 ~ 24486887 (+)
LOC122343172 NA non-coding upstream 248138 24417843 ~ 24419568 (+)
G30819 NA non-coding upstream 353418 24310339 ~ 24314288 (+)
G30754 NA non-coding upstream 657815 24003642 ~ 24009891 (+)
G30751 LOC107671223,LOC107569100,LOC107575457,LOC107747635,LOC107679413,LOC107566978,LOC107670352 non-coding upstream 666142 23978432 ~ 24001564 (+)
G30877 NA non-coding downstream 42546 24714697 ~ 24714998 (+)
G31223 NA non-coding downstream 316716 24988867 ~ 24989274 (+)
G31226 NA non-coding downstream 642072 25314223 ~ 25314596 (+)
G31228 NA non-coding downstream 643028 25315179 ~ 25315553 (+)
G31380 NA non-coding downstream 1115229 25787380 ~ 25787901 (+)
LOC122343125 NA other upstream 21105 24639089 ~ 24646601 (+)
LOC122343159 NA other upstream 29052 24636352 ~ 24638654 (+)
LOC122343023 LOC107568558,LOC107685877,LOC107725785,LOC107728057 other upstream 196256 24465454 ~ 24471450 (+)
LOC122343028 pacsin2,LOC107725788,LOC107569113 other upstream 201306 24454270 ~ 24466400 (+)
LOC122342990 NA other upstream 526260 24133050 ~ 24141446 (+)
LOC122343086 NA other downstream 740 24672891 ~ 24674412 (+)
G30882 NA other downstream 49273 24721424 ~ 24728447 (+)
LOC122342408 NA other downstream 71697 24743848 ~ 24767552 (+)
LOC122342771 ss18l1,LOC102784650 other downstream 962891 25635042 ~ 25688230 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other downstream 1021651 25693802 ~ 25695381 (+)

Expression


Co-expression Network