LOC122343105


Basic Information

Item Value
gene id LOC122343105
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24648967 ~ 24653215 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237438.1
TACAAAAATGAAGGTGACTAAAGGAGGAGTGAGAATGAGCCAATCGCAGCCATCTGGTGTCTGAACAGTCAGGAAACTGACAGGTAAACCGAAACTAAGCCAAAAACTGATCGGTCAGCTGGAGATTGAAGCAGAATGTCTCAAACTGTCATTCCCATGAACTCTTCGACGCTCATCATACAGTTTCAACCGGCAACACAAACCGCTCTTGTTACGACACTCAATGGTTTAAATGTACAAGAGCCGGCAAGAGCTTCGCTTCGTCAAAGATTCCAGAAATTTCTAAGACGACAACCAAAAGCCCTTGGGACGGTCCAGATAATGATCGGTTTGATGACTCTCCTGTTTGGCATCGTATCTTCGGTTTATGCAGACACTATCTTTGTCTACAGCGGTTGTGCTTACTGGGGATCTCTCATCTACATCATCACAGGTTCACTCTGCATTGctgcagaaaataaaatcaattcacCCTCCAGTTCATGTTTGGTGAATGCATCATTTGCAAtgaacattttcagcattttaaccACACTCGTTGCCATGACTTTAATTTCAATGGATTTGCTTATAGGGTCAATGAATGCCTTCTGCCGTGGATTTAACTGTCGTTATTCAGATAGAAGATACGAGTCTTCCTTCATGGGGTTTAGAGGTGTATTGTTGTTATTCACCGCACTTGAGTTTATcatctccatctgtctgtcaaCATTCACCAGTAATTGCAACAACTGCTGTTCAACTCGGGTTTTGCCACCACAGCCATCTGATTTCATGCCGGTTCATTTAGATGATTTTCAAAGCTCTGAGATCCCTGTTTCCATCAGCTATACCATCCCTGAACTGCCTACAGACCCTCCTCCACAAtacactgaataaaacatgagaaaaaaaaaagttcccttAAGAAACAAGGCGATATATTGGAAGATATGTGATGCAATATGTAGtttatttatcataaatgtagaagtattattatataaacataatattggTTTATAATTAAAAGAATGATGACATGTACATATGTATTATACACACGTTATTACTTAAATATGGTTACATTCAGTATGAAAAGCATTATTCCTTATTGCATTACTCTATATTGAATAATGGATATTATTCAGTGTACTATCAATATACATTAAAcaagttaatatattaatgattaatataCAAGATGatatgttttcatgtttaaGGGTATTGTTTCTGCAGTTGTGTGACATTTGTTTCCCCACTCTCCATTATCTTCACGTTGTGCTTATAAAATAGGAAACATTTCCTGGTCTTGAATAGTTTATACACatgatataaaaagaaaaagaaaaaataatttttaagttgTTCAAGTTGTTCAAACCTTAAAA

Function

GO: NA

KEGG:

id description
K22190 MS4A3S; membrane-spanning 4-domains subfamily A member 3/4/8/12/15/18

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237438.1 True 1373 mRNA 0.37 8 24648967 24653215

Neighbor

gene id symbol gene type direction distance location
LOC122342946 NA coding upstream 29576 24607037 ~ 24619391 (+)
LOC122342982 NA coding upstream 43150 24595853 ~ 24605817 (+)
LOC122343010 NA coding upstream 67173 24577163 ~ 24581794 (+)
LOC122343032 NA coding upstream 74535 24568994 ~ 24574432 (+)
LOC122343045 nots,LOC107677818,LOC107569115,LOC107725781 coding upstream 146837 24498607 ~ 24502130 (+)
LOC122343093 NA coding downstream 8614 24661829 ~ 24665576 (+)
LOC122343104 NA coding downstream 14491 24667706 ~ 24672151 (+)
LOC122342991 LOC107685875,LOC107570416,LOC107671223,LOC107749047,LOC107728228,LOC107569032 coding downstream 26707 24679922 ~ 24687980 (+)
LOC122342420 LOC107667978,LOC107563545 coding downstream 117417 24770632 ~ 24782341 (+)
zmp:0000000926 LOC107754864,LOC107661991,LOC107568831,LOC104958731 coding downstream 864181 25517396 ~ 25553833 (+)
G30812 NA non-coding upstream 162080 24456022 ~ 24486887 (+)
LOC122343172 NA non-coding upstream 229399 24417843 ~ 24419568 (+)
G30819 NA non-coding upstream 334679 24310339 ~ 24314288 (+)
G30754 NA non-coding upstream 639076 24003642 ~ 24009891 (+)
G30751 LOC107671223,LOC107569100,LOC107575457,LOC107747635,LOC107679413,LOC107566978,LOC107670352 non-coding upstream 647403 23978432 ~ 24001564 (+)
G30877 NA non-coding downstream 61482 24714697 ~ 24714998 (+)
G31223 NA non-coding downstream 335652 24988867 ~ 24989274 (+)
G31226 NA non-coding downstream 661008 25314223 ~ 25314596 (+)
G31228 NA non-coding downstream 661964 25315179 ~ 25315553 (+)
G31380 NA non-coding downstream 1134165 25787380 ~ 25787901 (+)
LOC122343125 NA other upstream 2366 24639089 ~ 24646601 (+)
LOC122343159 NA other upstream 10313 24636352 ~ 24638654 (+)
LOC122343023 LOC107568558,LOC107685877,LOC107725785,LOC107728057 other upstream 177517 24465454 ~ 24471450 (+)
LOC122343028 pacsin2,LOC107725788,LOC107569113 other upstream 182567 24454270 ~ 24466400 (+)
LOC122342990 NA other upstream 507521 24133050 ~ 24141446 (+)
LOC122343086 NA other downstream 19676 24672891 ~ 24674412 (+)
G30882 NA other downstream 68209 24721424 ~ 24728447 (+)
LOC122342408 NA other downstream 90633 24743848 ~ 24767552 (+)
LOC122342771 ss18l1,LOC102784650 other downstream 981827 25635042 ~ 25688230 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other downstream 1040587 25693802 ~ 25695381 (+)

Expression


Co-expression Network