LOC122343106


Basic Information

Item Value
gene id LOC122343106
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21870415 ~ 21878792 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237439.1
CCATTATTCAGACAGACACTCTTCACTGACTATTGtcagATCTTCTGTGAGGTTCAATCCAGCAGTCCAGaTAACTAAACAGTTGTAAAGGGCTTCATTGTCTAAAGTCAATTAGAAACATGGGTGATGTCAAGaatctACAGAAAAGAAGCTATCAGAATCTCCCTGATGACAGTGACTCTTCAGATGAGACAGTTGAATCTCCTTTACTGAAACGAGTTTTTGAAGAACATGGATACACCAAAATAGGACAACTGGGACGAGGGATTTCAGGAATAGTGTATCAGGTGACCAACAATTCTGGAGAGCATTATGTGATTAAACAGATGAACTCCAGAGAAAGGAAGGAGCAGAACGCTGTCCAAATGGAAGTCATGATCCTAAAGAAAATGATCCATGGATATATTGTTTCTTATGTGGAATCATTTGAAGATAAAGAAACTGGACTCTTTTATATTGTGATGGAGTATTGTGCGGGAGGAGATCTTTACAAGAGGATGAAAAAGCAGGCTGAGGAAGGCTTTTTTGAAGAACAACAGATCCTTGACTGGTTTGTTCAGATTTGTCTGGCCCTTCAGTATCTACACGAGGAGAGGAGGGATATTTGTCACAGAGACATAAAACCTCAGAATGTTTTTCTGACTGAAGATGACTACATCAATCTAGGAGACTTTGGATACTCAAAAGTGCACACAAGAGCTGATCCTTATGCAAGCTCTGTAGTAGGTGCAGAGCTCTATGTCAGCCCAGAAGGTCATCAGAAGAAATATAATTCCCCAAGtgaTATTTGGTCATTGGGATGGTTACTCTATGATCTCTGCATGCTGGATGTATGGGtgagtatgtttatttttccatcttaagaaacactaaataaataaatattaaataatgtaaattataacaGCTTGTGCTTAACATCTGGGGCCAGATTTATGAAAGAAGTTTAAAACAAGTGCTACCAAATAAGACAGGTTTGTTTCAGTTAGTCTGATTTATTGTCAGTTGATTTGGTTCAAATTATAACAGACTAACTAAAATAAGGCTTGCTTATTTGGTGTTTTGAGTaatcatttattgtaaaaaaaagttgctcTGAGAGGCAGCTGAATTTCCATAGCAGGCCACCCCTCTGCA
>XM_043237440.1
CTTCACTGACTATTGtcagATCTTCTGTGAGGTTCAATCCAGCAGTCCAGcagaTAACTAAACAGTTGTAAAGGGCTTCATTGTCTAAAGTCAATTAGAAACATGGGTGATGTCAAGaatctACAGAAAAGAAGCTATCAGAATCTCCCTGATGACAGTGACTCTTCAGATGAGACAGTTGAATCTCCTTTACTGAAACGAGTTTTTGAAGAACATGGATACACCAAAATAGGACAACTGGGACGAGGGATTTCAGGAATAGTGTATCAGGTGACCAACAATTCTGGAGAGCATTATGTGATTAAACAGATGAACTCCAGAGAAAGGAAGGAGCAGAACGCTGTCCAAATGGAAGTCATGATCCTAAAGAAAATGATCCATGGATATATTGTTTCTTATGTGGAATCATTTGAAGATAAAGAAACTGGACTCTTTTATATTGTGATGGAGTATTGTGCGGGAGGAGATCTTTACAAGAGGATGAAAAAGCAGGCTGAGGAAGGCTTTTTTGAAGAACAACAGATCCTTGACTGGTTTGTTCAGATTTGTCTGGCCCTTCAGTATCTACACGAGGAGAGGAGGGATATTTGTCACAGAGACATAAAACCTCAGAATGTTTTTCTGACTGAAGATGACTACATCAATCTAGGAGACTTTGGATACTCAAAAGTGCACACAAGAGCTGATCCTTATGCAAGCTCTGTAGTAGGTGCAGAGCTCTATGTCAGCCCAGAAGGTCATCAGAAGAAATATAATTCCCCAAGtgaTATTTGGTCATTGGGATGGTTACTCTATGATCTCTGCATGCTGGATGTATGGGtgagtatgtttatttttccatcttaagaaacactaaataaataaatattaaataatgtaaattataacaGCTTGTGCTTAACATCTGGGGCCAGATTTATGAAAGAAGTTTAAAACAAGTGCTACCAAATAAGACAGGTTTGTTTCAGTTAGTCTGATTTATTGTCAGTTGATTTGGTTCAAATTATAACAGACTAACTAAAATAAGGCTTGCTTATTTGGTGTTTTGAGTaatcatttattgtaaaaaaaagttgctcTGAGAGGCAGCTGAATTTCCATAGCAGGCCACCCCTCTGCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237439.1 True 1137 mRNA 0.38 11 21870416 21878792
XM_043237440.1 False 1121 mRNA 0.38 11 21870415 21878772

Neighbor

gene id symbol gene type direction distance location
LOC122342306 LOC107749047,LOC107728228 coding downstream 10131 21847120 ~ 21860284 (-)
LOC122342303 NA coding downstream 89796 21775098 ~ 21780619 (-)
LOC122342300 LOC107575420,LOC107563545,LOC107575457,LOC107741456 coding downstream 133874 21714679 ~ 21736541 (-)
LOC122343036 LOC107563870,LOC107718524 coding downstream 207582 21655902 ~ 21662833 (-)
LOC122343099 NA coding downstream 216418 21651364 ~ 21653997 (-)
LOC122343076 LOC107718513,LOC107692125 coding upstream 356965 22235757 ~ 22239007 (-)
LOC122343126 si:ch211-232d10.1,LOC107747635,LOC107569099,LOC107698614,LOC107574820 coding upstream 437116 22315908 ~ 22320097 (-)
LOC122342947 NA coding upstream 446718 22325510 ~ 22334793 (-)
LOC122342948 LOC107575457,LOC107741609 coding upstream 507071 22385863 ~ 22395600 (-)
LOC122343006 NA coding upstream 550282 22429074 ~ 22431623 (-)
G30423 LOC107575420,LOC107667978,LOC107563545 non-coding downstream 60797 21676876 ~ 21809618 (-)
G30425 NA non-coding downstream 194284 21673723 ~ 21676131 (-)
LOC122343179 LOC107667978,LOC107563545,LOC107741456 non-coding downstream 196991 21668810 ~ 21673424 (-)
G30408 NA non-coding downstream 370417 21499638 ~ 21499998 (-)
G30406 NA non-coding downstream 377508 21492264 ~ 21492907 (-)
G30465 NA non-coding upstream 401880 22280672 ~ 22281189 (-)
G30499 NA non-coding upstream 480425 22359217 ~ 22421953 (-)
LOC122343195 NA non-coding upstream 517726 22396518 ~ 22398023 (-)
G30506 NA non-coding upstream 546800 22425592 ~ 22428757 (-)
G30518 NA non-coding upstream 607983 22486775 ~ 22487119 (-)
LOC122343153 NA other downstream 86824 21387853 ~ 21783591 (-)
G30396 NA other downstream 93609 21629617 ~ 21776806 (-)
LOC122342302 NA other downstream 98016 21769124 ~ 21772399 (-)
G30372 NA other downstream 130085 21737091 ~ 21740330 (-)
G30395 NA other downstream 483978 21383469 ~ 21386437 (-)
G30450 NA other upstream 249662 22128454 ~ 22245160 (-)
G30457 NA other upstream 337243 22216035 ~ 22216470 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other upstream 1538099 23416891 ~ 23437015 (-)
G31017 NA other upstream 1599733 23478525 ~ 23546369 (-)
G31050 NA other upstream 1866694 23745486 ~ 23771768 (-)

Expression


Co-expression Network