LOC122343109


Basic Information

Item Value
gene id LOC122343109
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20147935 ~ 20150658 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237445.1
GGAGCCGCACTTGCCACACGAATACAGAGGAGGAACTCAACTCAGTCCACTACAGGAGAGTAACCGGGGTTAGTGTCTTGGCACTAAAGCTGTCCAAAAGCGTAtacctatatttatttataggcaAAACAGTGATGACGTCTACAAACATGTGGATGTCGTAAGAGGTGCGGTCAGAAGAAAATCGCTGATTGAGAATCCAGTCGTCTAAACTCACAGGTACtaacattaatcaaaaatatatttcagtatataattcaaatgtaaattcTTTAGTTGGGGACATACCTACAAAGTTAAATCAGAATAGTCGAATCTTGACAATATTCAACTGATAGTGGAATCTTGTTTGGGAGAAGTTCAGACTCAGACTCAGCATCACCGAAGCATCAAATCGACTTCACGGGGTGACCTTTAATGTTTGAGTTATAGGTTTTTTAAACGCTTTCAAATCGtgtgtcataaataaataactgtagaTGTTTTCCCAGCACTAAAAATGTCCAGAATTGTTGATGATAGGATTAATGAAGTTACGATAATGGACACCGAAGACCGAATAGAAAGTATTGTTGATATCTACGACAGTGCAGAGACTGTAAGAGACACCGGGGACTTCAAAACAACAGTCCCTCAACACACAGGAAGTGATGGTGTGAAGATCAGGAGCTCCAGAGCAGCTGTGGTGTGTTTGGTGATGCTGTGTGTTCTTCTGCTGACCGCGGTCTTTGCGCTGGGGGTGTACATCCATAAAACGGGCGCAAACTACGCAGAAGAGAGACGGCAGCTTCTAACCAGCTCAAGTCAATTTAATGAACTGTCAAAGTTTATTCAAGATGGATGGATTTATCAGTTCACTGTTTACTACGTTTCCAATGAGACGAAGAACTGGACTGAGAGCAGAAGATACTGtacagagagaggagcagatcTAGTGATCATAgagaacagacaaaaacaaGATTTCGTGAAGAAGATATCCAATGGAAATGACGTCTGGATTGATCTGACCGACAGTGAAGAAGAGGGAACATGGAAATGGGTTGATAACAGCACCCTGCCCTCTGACTCTGGGTTCTGGAAACAAGGAGAACCTAATGGAGGTACAGATGAGAACTGCGCTTTCAGTGGTTCAGCAGGACTGTTTGATTATACATGTTCTAACCTTTTAAAATGGATCTGCGagaggaaaaatataaaatgactgTATTATATACATGTTCATTTACAGCCTATATATTCCGAACAACTTAAACACCAAAATCTAATGAGTCATTCCGTTATTCTCTTACTACCATTTGCCTTCGatgtaaatgatttgttttttgtccatttctttTGATACTTCATTTATTACACGTTCCTGTCGCGTGTGACCCTTGCTGACCACTAAACTGAATGCAGCTTATAAAGGGGAGATGATGACAATATATAAGACACTCCTGAACATAAACTATgtcacacagagcacaaaaaacacaacaaaagtcCATAATTTTGACACATTGTCTATGTTCAGTAATGTTCTCTATGAATTTGTCTATTAAGtgaaaaatgctttgtttttgacactgttgtttattgtttaatgtcGCTTTTGTAGAAAgttgcagaaatattaaaatgtgtatggAATAAAAA
>XM_043237446.1
GGAGCCGCACTTGCCACACGAATACAGAGGAGGAACTCAACTCAGTCCACTACAGGAGAGTAACCGGGGTTAGTGTCTTGGCACTAAAGCTGTCCAAAAGCGTAtacctatatttatttataggcaAAACAGTGATGACGTCTACAAACATGTGGATGTCGTAAGAGGTGCGGTCAGAAGAAAATCGCTGATTGAGAATCCAGTCGTCTAAACTCACAGGATTAATGAAGTTACGATAATGGACACCGAAGACCGAATAGAAAGTATTGTTGATATCTACGACAGTGCAGAGACTGTAAGAGACACCGGGGACTTCAAAACAACAGTCCCTCAACACACAGGAAGTGATGGTGTGAAGATCAGGAGCTCCAGAGCAGCTGTGGTGTGTTTGGTGATGCTGTGTGTTCTTCTGCTGACCGCGGTCTTTGCGCTGGGGGTGTACATCCATAAAACGGGCGCAAACTACGCAGAAGAGAGACGGCAGCTTCTAACCAGCTCAAGTCAATTTAATGAACTGTCAAAGTTTATTCAAGATGGATGGATTTATCAGTTCACTGTTTACTACGTTTCCAATGAGACGAAGAACTGGACTGAGAGCAGAAGATACTGtacagagagaggagcagatcTAGTGATCATAgagaacagacaaaaacaaGATTTCGTGAAGAAGATATCCAATGGAAATGACGTCTGGATTGATCTGACCGACAGTGAAGAAGAGGGAACATGGAAATGGGTTGATAACAGCACCCTGCCCTCTGACTCTGGGTTCTGGAAACAAGGAGAACCTAATGGAGGTACAGATGAGAACTGCGCTTTCAGTGGTTCAGCAGGACTGTTTGATTATACATGTTCTAACCTTTTAAAATGGATCTGCGagaggaaaaatataaaatgactgTATTATATACATGTTCATTTACAGCCTATATATTCCGAACAACTTAAACACCAAAATCTAATGAGTCATTCCGTTATTCTCTTACTACCATTTGCCTTCGatgtaaatgatttgttttttgtccatttctttTGATACTTCATTTATTACACGTTCCTGTCGCGTGTGACCCTTGCTGACCACTAAACTGAATGCAGCTTATAAAGGGGAGATGATGACAATATATAAGACACTCCTGAACATAAACTATgtcacacagagcacaaaaaacacaacaaaagtcCATAATTTTGACACATTGTCTATGTTCAGTAATGTTCTCTATGAATTTGTCTATTAAGtgaaaaatgctttgtttttgacactgttgtttattgtttaatgtcGCTTTTGTAGAAAgttgcagaaatattaaaatgtgtatggAATAAAAA

Function

GO:

id name namespace
GO:0042440 pigment metabolic process biological_process
GO:0042168 heme metabolic process biological_process
GO:0046148 pigment biosynthetic process biological_process
GO:0033013 tetrapyrrole metabolic process biological_process
GO:0033014 tetrapyrrole biosynthetic process biological_process
GO:0006778 porphyrin-containing compound metabolic process biological_process
GO:0006779 porphyrin-containing compound biosynthetic process biological_process
GO:0006783 heme biosynthetic process biological_process
GO:0004418 hydroxymethylbilane synthase activity molecular_function

KEGG:

id description
ko00860 Porphyrin and chlorophyll metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237445.1 True 1641 mRNA 0.39 5 20147935 20150658
XM_043237446.1 False 1338 mRNA 0.40 6 20147935 20150658

Neighbor

gene id symbol gene type direction distance location
LOC122342264 LOC107572684 coding downstream 2290 20145055 ~ 20145645 (-)
trnal-cag_24 NA coding downstream 40196 20107657 ~ 20107739 (-)
trnal-aag_24 NA coding downstream 40976 20106877 ~ 20106959 (-)
trnal-aag_23 NA coding downstream 41748 20106105 ~ 20106187 (-)
trnal-cag_23 NA coding downstream 42876 20104977 ~ 20105059 (-)
LOC122343134 NA coding upstream 6497 20157155 ~ 20160273 (-)
LOC122343114 NA coding upstream 14051 20164709 ~ 20166414 (-)
LOC122342268 NA coding upstream 90957 20241615 ~ 20251885 (-)
LOC122343064 LOC107723244,LOC107659594 coding upstream 113002 20263660 ~ 20266849 (-)
LOC122343007 LOC107723241,LOC107659605,LOC107550566 coding upstream 116303 20266961 ~ 20269906 (-)
G29889 NA non-coding downstream 636 20145707 ~ 20147299 (-)
LOC122343174 NA non-coding downstream 3447 20142703 ~ 20144488 (-)
G29853 NA non-coding downstream 167212 19980489 ~ 19980723 (-)
G29851 NA non-coding downstream 167576 19979957 ~ 19980359 (-)
G29847 NA non-coding downstream 171794 19975231 ~ 19976141 (-)
G29900 NA non-coding upstream 2236 20152894 ~ 20153445 (-)
trnal-aag_25 NA non-coding upstream 59898 20210556 ~ 20210638 (-)
trnal-aag_26 NA non-coding upstream 61804 20212462 ~ 20212543 (-)
trnal-cag_25 NA non-coding upstream 62583 20213241 ~ 20213322 (-)
trnal-aag_27 NA non-coding upstream 63591 20214249 ~ 20214332 (-)
LOC122343146 NA other downstream 138223 20000988 ~ 20009712 (-)
LOC122342243 NA other downstream 810443 19333729 ~ 19337492 (-)
G29787 NA other downstream 1216060 18931536 ~ 18931875 (-)
LOC122343130 NA other downstream 1230402 18916326 ~ 18917533 (-)
LOC122343082 NA other downstream 1245383 18898807 ~ 18902552 (-)
G29902 NA other upstream 86479 20237137 ~ 20238554 (-)
G29906 NA other upstream 130448 20281106 ~ 20282400 (-)
LOC122343123 NA other upstream 707765 20858423 ~ 20864406 (-)
LOC122343098 NA other upstream 898199 21048857 ~ 21053725 (-)
LOC122343113 LOC107749046 other upstream 1125564 21276222 ~ 21279043 (-)

Expression


Co-expression Network