LOC122343114


Basic Information

Item Value
gene id LOC122343114
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20164709 ~ 20166414 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237465.1
CACAGACGAAGAGCACAACACTTCACTGTTCTTGACACTGAAATTAAAAGTACAGAAAAGGATAAAACCGGCAAAATGCACTGGGGAAATAGAAAAAGGGCTGATAATGTCTATGAAAATTACGTTAAACCTGGTCGTTCTCGCAGAGAAATCACTAACCGCAACATCCAATCATCTGAACTCACAGGAAATGATTCTGTGAAGATCAGAGCAGCTTTGGTGTGTTtggtgctgctgtgtgttcttCTGCTGATCTCAGTCATAGTGCTGTGTGTCACCTTCAATCAAGAGAGACAACAACTACTAACTAACATTACCAACTTAATTCagctaaatgaaaatttatCAAAGTTTATTCAAGATGGATGGATTTACTATCAGTTCGGTCTTTACTACGTTTCCAATGAGACGAAGAACTGGACTGAGAGCAGAAGATACTGtacagagagaggagcagatcTAGTGATCATAgagaacagacaaaaacaaGATTTCATGAAGAAAATATCCAATGGAAATGACGTCTGGATTGGTCTGACCGACAGTGAAGAAGAGGGAACATGGAAATGGGTTGATAACAGCACACTGCCCTCTGACTCTGAGTTCTGGAAACAAGGAGAACCTAATGGAGGTACAGATGAGAACTGCGCTTTCAGTGGTTCAGCAGGACTGTTTGATTATACATGTTCTAGTATTATCAAATGGATCTGtgagaagaaaaatataatacacatttaccattttttttaaccgtCACTCTTTACTATTTTACTCTATTATTTTAGTTGATAGATTATGAACATTGATCATATTTGTTATCTTGCTCACAGCCCTATTTCACTGATTACAAAACTGTTTGTAaatttgtgattattaataaaacccAAAAAGTAAAACTCAATTTCAAGTAAAACATCCAAACATCCAATCTTGTATATTTAAAGACTAAGACAATTTGTCTTTAAATTTAGAATATACAAAAGCACAATAAGTGGTGTTAGATCATGCCGTTGTGAAGTAGTACTGACACGTTTATTAGCGAATTCACCGTTCTTTCTCGGAGATAAAACCAGCATGGAATTCCCCTCCCCCCAGCACTGGAAG

Function

GO: NA

KEGG:

id description
K06563 CLEC4M, DC-SIGN2, CD209, CD299; C-type lectin domain family 4 member M

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237465.1 True 1104 mRNA 0.37 5 20164709 20166414

Neighbor

gene id symbol gene type direction distance location
LOC122343134 NA coding downstream 4436 20157155 ~ 20160273 (-)
LOC122343109 NA coding downstream 14051 20147935 ~ 20150658 (-)
LOC122342264 LOC107572684 coding downstream 19064 20145055 ~ 20145645 (-)
trnal-cag_24 NA coding downstream 56970 20107657 ~ 20107739 (-)
trnal-aag_24 NA coding downstream 57750 20106877 ~ 20106959 (-)
LOC122342268 NA coding upstream 75201 20241615 ~ 20251885 (-)
LOC122343064 LOC107723244,LOC107659594 coding upstream 97246 20263660 ~ 20266849 (-)
LOC122343007 LOC107723241,LOC107659605,LOC107550566 coding upstream 100547 20266961 ~ 20269906 (-)
LOC122343112 NA coding upstream 164033 20330447 ~ 20333281 (-)
LOC122342952 LOC107575457,LOC107561645 coding upstream 401965 20568379 ~ 21492901 (-)
G29900 NA non-coding downstream 11264 20152894 ~ 20153445 (-)
G29889 NA non-coding downstream 17410 20145707 ~ 20147299 (-)
LOC122343174 NA non-coding downstream 20221 20142703 ~ 20144488 (-)
G29853 NA non-coding downstream 183986 19980489 ~ 19980723 (-)
G29851 NA non-coding downstream 184350 19979957 ~ 19980359 (-)
trnal-aag_25 NA non-coding upstream 44142 20210556 ~ 20210638 (-)
trnal-aag_26 NA non-coding upstream 46048 20212462 ~ 20212543 (-)
trnal-cag_25 NA non-coding upstream 46827 20213241 ~ 20213322 (-)
trnal-aag_27 NA non-coding upstream 47835 20214249 ~ 20214332 (-)
trnal-aag_28 NA non-coding upstream 49746 20216160 ~ 20216239 (-)
LOC122343146 NA other downstream 154997 20000988 ~ 20009712 (-)
LOC122342243 NA other downstream 827217 19333729 ~ 19337492 (-)
G29787 NA other downstream 1232834 18931536 ~ 18931875 (-)
LOC122343130 NA other downstream 1247176 18916326 ~ 18917533 (-)
LOC122343082 NA other downstream 1262157 18898807 ~ 18902552 (-)
G29902 NA other upstream 70723 20237137 ~ 20238554 (-)
G29906 NA other upstream 114692 20281106 ~ 20282400 (-)
LOC122343123 NA other upstream 692009 20858423 ~ 20864406 (-)
LOC122343098 NA other upstream 882443 21048857 ~ 21053725 (-)
LOC122343113 LOC107749046 other upstream 1109808 21276222 ~ 21279043 (-)

Expression


Co-expression Network