LOC122343122


Basic Information

Item Value
gene id LOC122343122
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20470670 ~ 20476708 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237472.1
CTTTGTTTTGCTCGGCAAACAAGACACACCTGTCAGGGCGGGATCAAGTAAATCCCATCAGAATGTGTTTGTCCGTCATTGCAGGCTTCTCCTTcttctaatgctgtttgtgCTCTATCACACAGTGTGCTCTTTTCACGCACAGTATCCtggcaaaaatatgttttaacatcGGCATCAGTCAGTGGTGCAGATCCATCATGAATGAAACGCAAACATCTGGAGATGAAGATTTTATTCCACAATGCAGTGCTGATCATGGAGGAGAGTCCAGTATTACAGCAGGAATGAAAAAATatGCCTGTTTTCtaacactggatccaaacacagcaaacaatgATCTCCGTCTGTCTGAGGACAACCGAGAGGTGACATGTGTGTCTGATTCTCAGCCATACcgtgatcatccagacagatttgatgatGTGTGTCAGGTTTTGTgtagagagagtctgtgtggacgctgttactgggagactgagtggagTGGAGAAGTGTTggtatcagtgtcatataagagcATCAGCAGGAAGGGACGGGGTGAAGAGTGTTGGTTTGGAGGTactgatcagtcctggagtttgatctGCTCTCCTTTCAGAtactcattcagacacaatGACACATGGACCGAACTCTCAGTGAAGCCCATCATCATCAGAAAAGGAACTGGAGACTATGATAATGTCTATAaagtaggagtgtatgtggatgagagcgaaggaactctgtccttcttcagcaTCTCCAGAAACacaatgagactcatccacacagtccagaccacattcactcagacactctATCCTGGGTTTATGGCTTGGTTTGGATCATCTGTGAAattgtgttgatgaatcagaagagactgatgagATTCTACCCATAATTctttgagctgcatgatgaaTCAGTAACAGTGAGATGTTATGAGTCTCTTCAAGACATTAATACTGCAGCTCAACTTCTATCACTCAAATAACAGAATAAACATTTGtatcattataattaaaatgacctttccattgaaaagtttcttttacaaacatgaa
>XM_043237475.1
CCGCTTCAATGACTTGAGGGAAATTAGCCGGGATGAATTAATCTGACACCTTGCCGTTTTTTCTTCCTTGGAGGACTAGGCACCCTGTctcatgtattttaatatttgttatttaatataaaaagaatatctCACCTTCATGAGCTTTATGCAATCTTAAGCCCATATCATTTTTAGACTGTGACACCTGTAAAattgttactgtttttaatttaagaatattttcctaagaaataaaaattgtgtaaaatgtaattattattttttgtacagtgcAGTATTATCATCAAATCTCTTCAGACTGAACAATAGACTGTTTAACTGTTGTGATTGTTTGCCCTTTCCTTCTACAGTCAGTGGTGCAGATCCATCATGAATGAAACGCAAACATCTGGAGATGAAGATTTTATTCCACAATGCAGTGCTGATCATGGAGGAGAGTCCAGTATTACAGCAGGAATGAAAAAATatGCCTGTTTTCtaacactggatccaaacacagcaaacaatgATCTCCGTCTGTCTGAGGACAACCGAGAGGTGACATGTGTGTCTGATTCTCAGCCATACcgtgatcatccagacagatttgatgatGTGTGTCAGGTTTTGTgtagagagagtctgtgtggacgctgttactgggagactgagtggagTGGAGAAGTGTTggtatcagtgtcatataagagcATCAGCAGGAAGGGACGGGGTGAAGAGTGTTGGTTTGGAGGTactgatcagtcctggagtttgatctGCTCTCCTTTCAGAtactcattcagacacaatGACACATGGACCGAACTCTCAGTGAAGCCCATCATCATCAGAAAAGGAACTGGAGACTATGATAATGTCTATAaagtaggagtgtatgtggatgagagcgaaggaactctgtccttcttcagcaTCTCCAGAAACacaatgagactcatccacacagtccagaccacattcactcagacactctATCCTGGGTTTATGGCTTGGTTTGGATCATCTGTGAAattgtgttgatgaatcagaagagactgatgagATTCTACCCATAATTctttgagctgcatgatgaaTCAGTAACAGTGAGATGTTATGAGTCTCTTCAAGACATTAATACTGCAGCTCAACTTCTATCACTCAAATAACAGAATAAACATTTGtatcattataattaaaatgacctttccattgaaaagtttcttttacaaacatgaa

Function

GO:

id name namespace
GO:0004198 calcium-dependent cysteine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237472.1 False 1049 mRNA 0.42 4 20470670 20476708
XM_043237475.1 True 1221 mRNA 0.39 3 20472836 20476708

Neighbor

gene id symbol gene type direction distance location
LOC122342275 NA coding upstream 1609 20468226 ~ 20469061 (+)
LOC122342274 NA coding upstream 24534 20443346 ~ 20446136 (+)
LOC122343110 NA coding upstream 78296 20391465 ~ 20392374 (+)
LOC122343026 NA coding upstream 92564 20376410 ~ 20378106 (+)
LOC122343930 NA coding upstream 222441 20248111 ~ 20248229 (+)
LOC122342276 NA coding downstream 28703 20505411 ~ 20515629 (+)
LOC122343005 NA coding downstream 66424 20543132 ~ 20559014 (+)
LOC122342277 LOC107741474 coding downstream 157176 20633884 ~ 20638611 (+)
LOC122343085 LOC107561645,LOC107566978,LOC107748257,LOC107741456 coding downstream 163434 20640142 ~ 20644792 (+)
LOC122342964 NA coding downstream 178507 20655215 ~ 20677909 (+)
LOC122343178 NA non-coding upstream 8328 20459370 ~ 20462342 (+)
LOC122343162 LOC107575631,LOC107741456,LOC107667978,LOC107575420,LOC107741609,LOC107727338,LOC107575457,LOC107566978 non-coding upstream 27445 20440548 ~ 20443225 (+)
G29918 NA non-coding upstream 28664 20323680 ~ 20442006 (+)
LOC122343173 NA non-coding upstream 32162 20437665 ~ 20438508 (+)
G29883 LOC107723241,LOC107659605,LOC107550566 non-coding upstream 200558 20266836 ~ 20270112 (+)
G29927 LOC107681551 non-coding downstream 20389 20497097 ~ 20497868 (+)
G29945 NA non-coding downstream 154112 20630820 ~ 20631329 (+)
G29947 LOC107709565,LOC107727338,LOC107575420,LOC107569100 non-coding downstream 168549 20645257 ~ 20645535 (+)
G30005 NA non-coding downstream 308601 20785309 ~ 20785530 (+)
G30003 NA non-coding downstream 403741 20880449 ~ 20882908 (+)
G29921 NA other upstream 101854 20367675 ~ 20368816 (+)
LOC122342270 NA other upstream 123946 20344346 ~ 20346724 (+)
LOC122343063 NA other upstream 427217 20037933 ~ 20043453 (+)
G29835 NA other upstream 684542 19731262 ~ 19786128 (+)
G29961 NA other downstream 219964 20696672 ~ 20706846 (+)
G30058 NA other downstream 641854 21118562 ~ 21142831 (+)
LOC122342286 LOC107578117 other downstream 692485 21169193 ~ 21174340 (+)
LOC122342301 LOC107563870,LOC107718524,LOC107683800,LOC107564010,LOC107563545 other downstream 891935 21368643 ~ 21761181 (+)
G30119 NA other downstream 911485 21388193 ~ 21630120 (+)

Expression


Co-expression Network