rab14l (Rab14,rab14,LOC105889591,LOC107566859,LOC101069277,LOC103390174,LOC103045876,LOC107670386,LOC107674917,LOC107729136)


Basic Information

Item Value
gene id rab14l
gene name Rab14,rab14,LOC105889591,LOC107566859,LOC101069277,LOC103390174,LOC103045876,LOC107670386,LOC107674917,LOC107729136
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 17963589 ~ 17969568 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237477.1
GACTCCTTTAATAGATCCTGAGTCTCTGGCGCCGCGCGTCGGCGCGCCGCGGAACCGCGTCAGTCTTTGTGCCGCCGCCATCTTGACCAGGATCCGGATAACCAGCATCTGAACACACCGATTCCCAGCACACACGCGCGACTACAGagcgGCGATGGCCACTGCACCCTACAACTACTCCTACATCTTCAAGTACATCATCATCGGAGACATGGGCGTGGGGAAGTCCTGTTTACTTCACCAGTTCACCGAGAAGAAGTTCATGGCCGACTGTCCGCACACCATCGGCGTGGAGTTCGGCACCAGGATCATCGAGGTGAGCGGTCAGAAGATCAAGCTGCAGATCTGGGACACGGCGGGTCAGGAGCGCTTCAGAGCCGTCACGCGCAGCTACTACAGAGGAGCCGCCGGAGCGCTGATGGTGTACGACATCACCAGGAGAAGCACCTATAACCACCTCAGCAGCTGGCTGACCGACGCCAGGAACCTCACCAACCCCAACACTGTCATCATTCTCATAGGAAACAAAGCGGATCTGGAAGCGCAGAGAGACGTCACGTATGAAGAAGCCAAGCAGTTCGCCGAAGAGAACGGTCTGCTGTTCCTGGAGGCCAGCGCTAAAACAGGAGAGAACGTGGAAGACGCGTTTCTGGAAGCAGCTAAGAAGATCTATCAGAACATCCAAGATGGCAGTCTGGACCTGAACGCGGCCGAGTCGGGCGTACAGCACAAACCCTCGGCGCCGCAGGGCGGGCGGCTCACCAGCGAACCACAGCCGCAGAGAGAAGGGTGTGGCTGTTAATGaccttcatcctcctcctcctcctcctcatcacaCACTCGGCCGTCCCAGAGAGGGGAGGATCACAGCTACATGCGCTCATTCCCTTCTCTCTCGTCATCTGTCCGTCCTCACTCTCTCTGGTCGGTGTGTTCTTACGTTCCCTTCATCCTCTGACCGCACTAACCATTTCCCATCACGTCACACTTCAGTTCAGCTTCTTTTTATTGACGCATTTTACAGCTCGACAGACCCTGGTTGCATCAGGATTATATTGAATGCGTTTCTGCTGCCGTTTTTTCCACCCGTTTGAGAACCAAAGTTCAAGTTTGTGAAGCGTTCAAGGCAGGAGGACCGCTCTGTTCCGGTCAGACGCCTCCTGCTGCTGAGGGGCGCGAGGTGGAGGTGCTCGGAATAATGCATTGCATTCATGCATCTGTAAACGTACAGCGGTTGCACTGATCCCAGATTTAAAACCGAATGAAAGTCTCTTGTTGCGAGCTCGCAATCACGTGCATGTCGACATGCGAGGGTCCGCTTGGTTCAGACAGCTTTATGAATCAAAGACACTTTATGGAAAGACTGATTCTTGCCCCTTCGTCATATCAGTATCCATTCATCTGTCCTCTCCACCGCTTTTTTGTGTTGCCTTATTGTTACTCATTCATCTTAATATTATTACCATCACTCTTTAATCTCGACTAGCTCAACATGCAGTTCGAACTTGAGTTCAACAAACGGTTTTACAACACCGCTACTGTTTTGATCTGTGAAACGGCTCCAGACGTGTAGGCTGTACAGTAATCATCAGAGCATCGGCTTGTATATTAACAGCATCACGCACAGCTTCTTCTGAAGCAGCATCTGTGTCTTAACTCAGTGTACGTACCATATGAAATGGGATCCGATTCAGCTGCTGTACATAAGGCTGTATCTGTTGGTGATGAAACACAGCCCTGACGCCTCGCTCATAAACTCTCCGCCCGAAGAGACGCCAGGCAGATTCTACAGAAAGTCTTAAAGATGGAGCTCAGATCTCGACTGATCTAGTCCTTCTGAACTGTTTGAACGACCTCTTCTCGCGAGTAAAAAGCAGTACATATGTATAAACTTTGAAGGAGCTGTGCTAACGTTTGAAAAATCTGTTTATGCGtgtatgtgattttaaaatgttgacattttgattttaatgatgacaataaaaatgCTCTATCACAGGAAA

Function

symbol description
rab14 Predicted to enable GTPase activity. Predicted to be involved in Golgi to endosome transport; intracellular protein transport; and phagolysosome assembly involved in apoptotic cell clearance. Predicted to act upstream of or within defense response to bacterium; endocytic recycling; and phagosome maturation. Predicted to be located in Golgi apparatus and endosome. Predicted to be active in early endosome and phagocytic vesicle. Is expressed in several structures, including axis; nervous system; neural tube; notochord; and trigeminal placode. Orthologous to human RAB14 (RAB14, member RAS oncogene family).

NR:

description
ras-related protein Rab-14

GO:

id name namespace
GO:0006895 Golgi to endosome transport biological_process
GO:0032880 regulation of protein localization biological_process
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0045176 apical protein localization biological_process
GO:0007589 body fluid secretion biological_process
GO:0008543 fibroblast growth factor receptor signaling pathway biological_process
GO:0015031 protein transport biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0032456 endocytic recycling biological_process
GO:0009790 embryo development biological_process
GO:0030670 phagocytic vesicle membrane cellular_component
GO:0048471 perinuclear region of cytoplasm cellular_component
GO:0005765 lysosomal membrane cellular_component
GO:0005770 late endosome cellular_component
GO:0030140 trans-Golgi network transport vesicle cellular_component
GO:0005791 rough endoplasmic reticulum cellular_component
GO:0005795 Golgi stack cellular_component
GO:0005829 cytosol cellular_component
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network cellular_component
GO:0055037 recycling endosome cellular_component
GO:0000139 Golgi membrane cellular_component
GO:0031901 early endosome membrane cellular_component
GO:0097208 alveolar lamellar body cellular_component
GO:0016324 apical plasma membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0019003 GDP binding molecular_function

KEGG:

id description
K07881 RAB14; Ras-related protein Rab-14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237477.1 True 2003 mRNA 0.51 8 17963589 17969568

Neighbor

gene id symbol gene type direction distance location
spra LOC107597947 coding downstream 31170 17927787 ~ 17932419 (-)
smyd1a smyd1,LOC107745315,LOC107597934 coding downstream 36892 17915571 ~ 17926697 (-)
thnsl2 thnsl2,LOC107597948,LOC107578849,LOC107735618 coding downstream 51157 17903576 ~ 17912432 (-)
dqx1 dqx1,LOC107597950 coding downstream 64722 17884719 ~ 17898867 (-)
LOC122342984 LOC100150651,LOC107755845,LOC107668749,LOC107599606 coding downstream 82793 17854701 ~ 17880796 (-)
tbx5a tbx5,LOC107670381,LOC107729059,LOC107745406,LOC107688016 coding upstream 58930 18028498 ~ 18041948 (-)
tbx3a LOC107742157,LOC107597930,LOC107687999,LOC107728866,LOC107566860,LOC107670392 coding upstream 89757 18059325 ~ 18067165 (-)
LOC122343062 NA coding upstream 223741 18193309 ~ 18196521 (-)
mtfp1 mtfp1,LOC107565646,LOC107566856 coding upstream 229482 18199050 ~ 18202131 (-)
wbp1 LOC107670394,LOC107728527,LOC106563291 coding upstream 243979 18213547 ~ 18218528 (-)
G29457 NA non-coding downstream 22800 17873152 ~ 17940789 (-)
LOC122343170 NA non-coding downstream 133646 17828586 ~ 17829943 (-)
G29445 NA non-coding downstream 139325 17823219 ~ 17824264 (-)
G29442 LOC107599601 non-coding downstream 141119 17819360 ~ 17822470 (-)
G29440 NA non-coding downstream 145656 17817562 ~ 17817933 (-)
G29487 NA non-coding upstream 15445 17985013 ~ 17985818 (-)
G29656 NA non-coding upstream 411422 18380990 ~ 18409895 (-)
G29662 NA non-coding upstream 466077 18435645 ~ 18465837 (-)
G29663 NA non-coding upstream 466999 18436567 ~ 18461313 (-)
G29680 LOC107747644,LOC107709964,LOC107690747,LOC107687572,LOC107562152 non-coding upstream 586932 18556500 ~ 18559281 (-)
LOC122342228 scgn,LOC107693759,LOC107757885,LOC107669120,LOC107714763,LOC107747999,LOC107663245 other downstream 219046 17734606 ~ 17744543 (-)
G29417 NA other downstream 227315 17735350 ~ 17736274 (-)
srd5a3 srd5a3,LOC107755245,LOC107683999,LOC107665336,LOC107601910 other downstream 324847 17637023 ~ 17638742 (-)
xrcc3 xrcc3,LOC107755221,LOC107683971,LOC107560377 other downstream 841460 17118343 ~ 17122129 (-)
G29135 NA other downstream 945766 17006927 ~ 17017823 (-)
G29473 NA other upstream 1037 17970605 ~ 17979922 (-)
G29653 LOC107663329,LOC107575399,LOC107749046,LOC107758217,LOC107576964,LOC107665206,LOC107571858,LOC107671223,LOC107576424 other upstream 438992 18408560 ~ 18428343 (-)
LOC122343054 NA other upstream 685676 18655244 ~ 18661653 (-)
LOC122342944 LOC107581743 other upstream 723434 18693002 ~ 18735640 (-)
LOC122343082 NA other upstream 929239 18898807 ~ 18902552 (-)

Expression


Co-expression Network