LOC122343126 (si:ch211-232d10.1,LOC107747635,LOC107569099,LOC107698614,LOC107574820)


Basic Information

Item Value
gene id LOC122343126
gene name si:ch211-232d10.1,LOC107747635,LOC107569099,LOC107698614,LOC107574820
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22315908 ~ 22320097 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237479.1
attcacaacacagtataattaaaacatacaaactgAAGGTCAAAGATTCATTATTGAGCACACTGATCCAATAACAGAGTGTAACGCCatgccagcagagggagccgtCGCCCAAGTACTGACTCGTCTCCACTTCCTCTGCGCTCACTTCTTGTTTGCCCAGCATAAAGCCAGAGCACATGTTACACTTATTGCGAATTATTGCCAGTTtcactgccttaccaagcgtttctCCCATGTTTATTCTGACTGCCAGCTGAGGCCCGTGAAGCTGAGGTCCACATTAATGTAAAGCCTTTCTGCGCCCTCCTTGATACCGGCAGCGCGGTGAGTTTGGTATGACCCAACATCGTCGCTCCCAGGGTAGAAACAAAATCCTACATCCCCATTTCCTGTGTGCATGGAGAAACATGACAAGTGCCCACCTGGAGGGGTGAACATGTCTGCGGTTTCTGGTTCCTGGCCGATTGAAGGTCGGGATATTAAAGGATCTGCCAGTGCTGCTCAGAAGGCATTAGCCAGGGTTTGACCGCCTCCTGTCCACACACAACCTGCCAGCCCCAAAGGGAGACACGACAATGGAGGCCAGCTCGACGACCACAACAATGCCCAACTCTACTGGTGAAGTGAAGCTtctttctgatggactgaagagtccaaactcaAAGCTGGAGATTTTAAGATTTTCCATATGTAATCTCACTACACAGTCTTGTGagagtttgtcttcagttttacaatcctcaaactctgtcctgagagAACTGGACCTGAGTagcaatgacctgcaggattcaggagtgaagctgctttctgaaggactgaagagtttAAACTCCAAGCTGGAGACAATGAGgttgtctggctgcatggtgacagaggaaggctgtaattatttgtcttcagctctgacttcaaacccctcacacctgagagagctggatctgagctacaatcatcctggagattcaggagtgaagctgctctctgaaaaactggaggatccaaactgctcACTGAATAAACTCAACGTTGATCATGGAGGAGAATCCAGGATTACAACAGGACTGAAGAAATatgagtgttttctcacactggatccaaacacagcacacactaaaCTCAGACTGTCTGAGGACAACAGAAGAGTAACATTTGTGTTTGAGTCTCAGCCATAtccctgatcatccagacagatttaaAATGTCTCAGGTGTTGtgtggagagagtgtgtgtggacgctgttactgggagactgagtggagTGGGTTTGTGGATATATCGGtgtcatataagaacatcagcagaAGGAGAggtgatgagtgtgtgtttggacgtaatgatcagtcctggagtttgatctGCTCTCGCTACAGTTACTCATTCATACACAATAACAGAGAGACTAATTtctctgtgaagcccatcaTCATCAGCAGAAGACCAGAAGTGTATGGTAATGATAATATCTATAGAACAGGAGTGTATTTGGATGAGAGCGCAGGGATTCTGTCGttctacagcgtctctgacacaatgagactcatccacacagtccagaccacattcactcagacactctgtcctgggttttatcttttttttggatcatcagtgaaactatgttgatgaatcagaagagactgagCAGAGATTCTACCCATAATGCTTTGAGCATGATTGATGAAGAACATGTAATcaatttctgttatttttgtatagaaataaaaatactaaaaaaaataaagataaatcgACTTGATATCAGATTTTAATCAATGTTTGTATCATGAATATAACTGATTTTTGACAAGA

Function

symbol description
si:ch211-232d10.1 Predicted to be involved in intracellular signal transduction.

NR:

description
PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237479.1 True 1815 mRNA 0.44 5 22315908 22320097

Neighbor

gene id symbol gene type direction distance location
LOC122343076 LOC107718513,LOC107692125 coding downstream 76901 22235757 ~ 22239007 (-)
LOC122343106 NA coding downstream 437116 21870415 ~ 21878792 (-)
LOC122342306 LOC107749047,LOC107728228 coding downstream 455624 21847120 ~ 21860284 (-)
LOC122342303 NA coding downstream 535289 21775098 ~ 21780619 (-)
LOC122342300 LOC107575420,LOC107563545,LOC107575457,LOC107741456 coding downstream 579367 21714679 ~ 21736541 (-)
LOC122342947 NA coding upstream 5413 22325510 ~ 22334793 (-)
LOC122342948 LOC107575457,LOC107741609 coding upstream 65766 22385863 ~ 22395600 (-)
LOC122343006 NA coding upstream 108977 22429074 ~ 22431623 (-)
LOC122343060 LOC107677814 coding upstream 175189 22495286 ~ 22499529 (-)
LOC122342313 LOC107703281,LOC107657504,LOC107693510,LOC107570418 coding upstream 248127 22568224 ~ 22577494 (-)
G30465 NA non-coding downstream 34719 22280672 ~ 22281189 (-)
G30423 LOC107575420,LOC107667978,LOC107563545 non-coding downstream 506290 21676876 ~ 21809618 (-)
G30425 NA non-coding downstream 639777 21673723 ~ 21676131 (-)
LOC122343179 LOC107667978,LOC107563545,LOC107741456 non-coding downstream 642484 21668810 ~ 21673424 (-)
G30408 NA non-coding downstream 815910 21499638 ~ 21499998 (-)
G30499 NA non-coding upstream 39120 22359217 ~ 22421953 (-)
LOC122343195 NA non-coding upstream 76421 22396518 ~ 22398023 (-)
G30506 NA non-coding upstream 105495 22425592 ~ 22428757 (-)
G30518 NA non-coding upstream 166678 22486775 ~ 22487119 (-)
G30520 NA non-coding upstream 167323 22487420 ~ 22488169 (-)
G30450 NA other downstream 70748 22128454 ~ 22245160 (-)
G30457 NA other downstream 99438 22216035 ~ 22216470 (-)
LOC122343153 NA other downstream 532317 21387853 ~ 21783591 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other upstream 1096794 23416891 ~ 23437015 (-)
G31017 NA other upstream 1158428 23478525 ~ 23546369 (-)
G31050 NA other upstream 1425389 23745486 ~ 23771768 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other upstream 1790127 24110224 ~ 24110673 (-)
G31134 NA other upstream 1983999 24304096 ~ 24497596 (-)

Expression


Co-expression Network