wbp1 (LOC107670394,LOC107728527,LOC106563291)


Basic Information

Item Value
gene id wbp1
gene name LOC107670394,LOC107728527,LOC106563291
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 18213547 ~ 18218528 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237480.1
GtgattattattgatattattgttattattgctgttgCTGGATGTGATGCTGCTGCCCTCTGTGTGCGGATCCCATGAAATCACGTTCATCAGCACAGACATGGCGTCTGGACGGGCGTCGCATCTGTTCAACTGAAGCTTTATGATTCTGGTCGAGTTTAGGAAGAAAACGCAGCAAGATGCCGCAGAAGATGCTGGGCTCCGTGGTGGGACTCCTCTGCACAGGGGCGTGTTTGGTTGAGGCGAAGGAGTTTTGTTTCGGAGTGAACAATGAACAGTACCGCTGTGAGATGGGCTACTGCTGCGGAGAGACCGAGTGCTGCACTTACTATTACGAGCTCTGGTGGTTCTGGCTGGTCTGGACTCTCATCATCATGCTGAGCTGCTGCTGCGCCTACAGACACCGGCGAGTGAAGATGCGTCTGCAGCaggagcagagacagagagagatcagTCTGATGGCGTATCAGGGTGCCTCCAGCGCCTTCatcactcctcctcctcctctcaaCCTGCGCTTCTGGACGGACTGTAAGCTGCCCGACTACGAGGAGGTGATGGCTCACCCACCCACACCTCCTCCACCCTACTCCCCTCCGGAGCCTCAGGGGCCGCTGGAGCCTCAGGAGACGCCGCAGGAGCCCGAGGAGCCCAGCGGCCGGCGCAGACACGTGACCGGAGACTCGGGCatcgaggtgtgtgtgtgccagctGGACGAGGGCTCAGGGCCCGAGGAGGAGGCCCCGTGTCAGGGGCCCGCCGGCTGTGATCAGGAGTGAGGAGCCCGGGAGAGACTGTGTCTCCTGAGCAGCGTAACGCCTCAAGTGTGTCTCTGACTGCACCGTGTGTTTCCGTTTCCCAGAATCCCTCTCGCTTCCCTCTCACACACTTAACCAATCACACACACCACGGTTTGATTCTCACAGCTGCCCTGAGACCTCAGCccagagccacacacacacacacacagacagagcgtctctctcacacacacacacactctcacagggCGGTGTGTGTAGTTTGTGATTATTGTGCTGATAAACACACAGTCAGCTGATCGTCTCATCGTGGCCTTACCTGTTTCACACGGCTGCTGTAAAGAAGCGTGCcgtcccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaacagtcACATGACTCTCCTCTATGATTAGTGTTCATTAGTGAAGCACAGATGTGGTCAGATGcgatgtgtgtgtctgcattAAGGGCTAAAATCAAGATCAGAATGTTTGCGGTTGGTTTTCTGGTGTCCGTGGTGTTTTTCACACGTCTCTGTTGCACTGATGGACGGCGTCGTCCACAAAATTCTTTGACTCCAGCTCAATTCCCACAACGTTTACAGACTCTGTGCCTTTCCCGGTGGAAATCCagactaactaactaactaactaactaggCTATGCAAAACCCCAGGACTCTCTGTTATGAGCTGCAGTAACGAGCAATACTCGACTCCTTCCCTGTGTGATCAGCGCGCAAGCGTTCACTTTATTTCCTCACCATCTGTCCACGAGTGAAAGTCATGACGTGTTTCTCTACTAACTCTCGTATAACTTGTTTTGGATTCTTCAGCGTTCTCCGGCGTCACCGGTCCCGTTACGCTGGTGCTCTGAAATATGAAGCCTTTGACATCGAGCAGCTCCGAGTCTGTTGTCAAATGTGTGATTAATACAAAGACGTTTAATATCGAGCCAAATCACAGCGCAAACCAGTTCTTCTATAAGCACGTTGAACTGTTTTACTTCATACTCGTTTATAACAGTAGTTCTCTGCTGAAGTGTGTACCGTATTTACTTGACTCTACTGACGGTCGGTGAGCGTTTCTGATAGCAGCTAgtagtgatgatgatgatgatgatgatgatgatgatttctgCCAAACAGCAGCTGATGTGGAGATGTTCACAGACATACAGACTCGTTTGTGGTTCCAGCACTGAGCTCTGTGTGGCGTTTCTACTGTCGGTTCTTTAGCAAGACGTCTGCTGTGTCTCTATagtcatttgtattttatttttgtaataaaataataaaccagcTTTGGCACTGA

Function

NR:

description
WW domain-binding protein 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237480.1 True 2076 mRNA 0.51 4 18213547 18218528

Neighbor

gene id symbol gene type direction distance location
mtfp1 mtfp1,LOC107565646,LOC107566856 coding downstream 11416 18199050 ~ 18202131 (-)
LOC122343062 NA coding downstream 17026 18193309 ~ 18196521 (-)
tbx3a LOC107742157,LOC107597930,LOC107687999,LOC107728866,LOC107566860,LOC107670392 coding downstream 146382 18059325 ~ 18067165 (-)
tbx5a tbx5,LOC107670381,LOC107729059,LOC107745406,LOC107688016 coding downstream 171599 18028498 ~ 18041948 (-)
rab14l Rab14,rab14,LOC105889591,LOC107566859,LOC101069277,LOC103390174,LOC103045876,LOC107670386,LOC107674917,LOC107729136 coding downstream 243979 17963589 ~ 17969568 (-)
LOC122343150 LOC107570416,LOC107749047 coding upstream 156799 18375327 ~ 18431434 (-)
LOC122342232 LOC107685875,LOC107749047,LOC107728228,LOC107671223 coding upstream 226924 18445452 ~ 18476759 (-)
ptprr ptprr,LOC107684538,LOC107709966,LOC107690749,LOC107747646 coding upstream 307478 18526006 ~ 18544653 (-)
LOC122343050 LOC107685395,LOC107754219,LOC107554754 coding upstream 349635 18568163 ~ 18571675 (-)
LOC122342233 LOC107685397,LOC107554760 coding upstream 353177 18571705 ~ 18579003 (-)
G29487 NA non-coding downstream 227729 17985013 ~ 17985818 (-)
G29457 NA non-coding downstream 272758 17873152 ~ 17940789 (-)
LOC122343170 NA non-coding downstream 383604 17828586 ~ 17829943 (-)
G29445 NA non-coding downstream 389283 17823219 ~ 17824264 (-)
G29442 LOC107599601 non-coding downstream 391077 17819360 ~ 17822470 (-)
G29656 NA non-coding upstream 162462 18380990 ~ 18409895 (-)
G29662 NA non-coding upstream 217117 18435645 ~ 18465837 (-)
G29663 NA non-coding upstream 218039 18436567 ~ 18461313 (-)
G29680 LOC107747644,LOC107709964,LOC107690747,LOC107687572,LOC107562152 non-coding upstream 337972 18556500 ~ 18559281 (-)
G29682 trim24,LOC107562152,LOC107690747,LOC107747644 non-coding upstream 344626 18563154 ~ 18564445 (-)
G29473 NA other downstream 233625 17970605 ~ 17979922 (-)
LOC122342228 scgn,LOC107693759,LOC107757885,LOC107669120,LOC107714763,LOC107747999,LOC107663245 other downstream 469004 17734606 ~ 17744543 (-)
G29417 NA other downstream 477273 17735350 ~ 17736274 (-)
srd5a3 srd5a3,LOC107755245,LOC107683999,LOC107665336,LOC107601910 other downstream 574805 17637023 ~ 17638742 (-)
xrcc3 xrcc3,LOC107755221,LOC107683971,LOC107560377 other downstream 1091418 17118343 ~ 17122129 (-)
G29653 LOC107663329,LOC107575399,LOC107749046,LOC107758217,LOC107576964,LOC107665206,LOC107571858,LOC107671223,LOC107576424 other upstream 190032 18408560 ~ 18428343 (-)
LOC122343054 NA other upstream 436716 18655244 ~ 18661653 (-)
LOC122342944 LOC107581743 other upstream 474474 18693002 ~ 18735640 (-)
LOC122343082 NA other upstream 680279 18898807 ~ 18902552 (-)
LOC122343130 NA other upstream 697798 18916326 ~ 18917533 (-)

Expression


Co-expression Network