LOC122343131


Basic Information

Item Value
gene id LOC122343131
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 23226211 ~ 23229732 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237488.1
CGGCGCTGTGAGGTCATATGCGCGCGCCGCGCTCTCGCTCCCGTGATTGCGGCTGAAGAAAGGTGGAAAACAGAAGAAAGTGTCCAAACACAGAACCATTCCTGGTGGATCGGCTCTCATACTATCACAGAGATGGCGTCTATTAAAGAGGAGAGCGAAGAGATCAAGATTGAAGAAGTGTTCAGAGTCAAGCTTGAAGATACTGAGCAACAAACGGTCCCAATGGCGTTCAAAAAGGAAGATCAAGAACTGGATGAAGAGCAGGAGAAAGATCAGTGCAGTATGCAACAGGATTTCATGACCGGCGAAAAACCCAGACAGGCTGAAAAGATCTTGTCTCGAAAAGAGCTCAGAAGACCAAACCCAACCGGACAGCGAAACAAAACCGCCAGGTCCAGAAGAGCGCTCCCACTGGAGAGGCGGCGTTTGCGTGCGAccagtgtggaaagagcttctCAGACGCCAAGCGCCTTAAAAGACATGTACCGATTCACTCCACAGAGAAACCCTTCACGTGCCAGCAGTGTGGGAAAACGTTCAAGTTGAACAAATACCTCTTGACTCACAAGACGGTCCACACCAAAGAGAGGCCCTTCACCTGCACAcagtgcggaaagagcttcTCGCAAGAGGCACATCTGAACAATCACTTGAAGGTCCACGCCAGACAGAAGTCCATCGCGTGCCAGACgtgcggaaagagtttcacACACAAAGGAGATCTTAACACCCACATGAGCCTTCACACCGGAGTGAGGCTTTACAACTGCAAGGCGTGTGGGAAGAGCTTCTCGTGCAAAGGGAACCTCAACACCCACACAagaattcacaccggagagaagccctacATGTGCGaccagtgcgggaagagcttcaggTTCAAAGCGACTCTCACCTACCACATGAGCATCCACTCCAGAGAAACCCGTTTCCTCTGCCATCAGTGCGGAAGGACTTTCGCTGACGGCAGCCTTCTCAAGGTTCACGTAACGGCTCACGGCGGAGAGAAGCCGAACATGTGCCATCactgcgggaagagcttcacgaAGCGCTACACCCTTAAGAATCACATTCGggtccacaccggagagaagcccttcaCCTGTGCCCAGTGCGGAAGGAGCTTCGCCGTTAAAGAAAACCTGCGGACTCACAAGAGAATTCACTCTGGGGTCAAGCCGTTCACCTGCCAGCACTGTGGAAAGAGTTTCGTACTGAAGGGAAACTTTAAGAGACACGTGTGGCGTCACGAGTGAAAACGGAAGAGTGAATTAACTGAAGATGCCTACGGCTTTTTCTGATGCATCGCAATTGACCGTTCACTAATACCGTTGCCATGACCTCACACTACGCGTGTGTTtccacacagtgaaaaatacatcacacAGCAAAGAGAAAGCTGACAACATGCTGGAGAAGACAGAGCAGGTCACTTCTCACACTAAACAAGGTCTCTGTTTTTTAATCGTCTCGTTATTAAAGAAACTATGAATACCATTCTGTGGCTCTTTAACGTGTTGTGATGGATCACTGTATGTTTCGGTTCAAACGTGAACCGATcgtctttttatattaaaatgacatactTACCGCCAAGGTGTACGTGACTTTTTTTCAGCCAAACGCATTTCGTGGTTTTATTCTGGCTCTTCCACGGCTTGGTAATGCCGGTGAATACTGCCCCTTATGTTGAAGCTCCATAGAtggcatatacatatatatatctgtcgTAAAGCTAACCTTCATGCCTCCGGGGGTTAGCgcacgtcttctgaagcagattggTGGGTTTTTGCAATAAACATACTTCTAAAGCAAATCACTGATGTTCGCGAGAGAGTGGACTTCTGGCTTCTTGGATGATGTCAGCGGAAACATGAAAGTCTTGTACATCTAGTAGATTAtgagctcattttaatttttgggcaAACTGTTCTTGTTTCTGTTAAGAGCTAGTGTGGTGTGCATGGTGTATCGTctatgctttttttcttgtaataaacaaaattacttCACATTCTTCTTACGTCTTTTTCACGTTCCtcaaatacattacaaaaatgaataacataCTGCATACAActtacaaaaacagaaaactccTAGGTAGTGGTTGTCTTTTACTACTTTACACATAAAAGCATTTAAGAGTGTCACAATATGCATTAAGCAATCCACTTATGTCCTTTAATTTCTTATAAAAGTTGCATAATCACGTGATTTTCAATGGAAGTCTCCCAATATGGTTAAATTGGAGGTGCTTCCGaataaaaattagatttataAACAGTAATTGTTCAATCGTGGGTAAAAGCTGCATGCTCATGTTtgataaatgtgatttttttacaaactttaCAGGCTTTAAACACTTCTTTcaagtatttaaatgaaaacaatattaaccTTTCAATGTGAAATTCCCACAGAACGCCTATCCACCTTgttctttgaataaaagcactgTTGTCATATGTGCGCTATGAATTCTGGGTTTTCCTTGGAAACGGAGGATGCATTTTTGTAACGTTGCATTACAAACGTTTTGTAAGAGAGTCGACTATGAAACACTGAAACGAAATGGCTGGTGACGGCTGTACAAACGctacttttattatgaaattgcAACGTCAAACAAATGAGTCACTgagcaaaaaagtaaaaataaatacacat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237488.1 True 2676 mRNA 0.44 3 23226211 23229732

Neighbor

gene id symbol gene type direction distance location
LOC122343008 LOC107575457 coding upstream 42665 23168155 ~ 23183546 (+)
LOC122342997 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding upstream 477591 22739960 ~ 22748620 (+)
LOC122342996 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding upstream 519717 22695800 ~ 22706494 (+)
LOC122343101 NA coding upstream 536532 22685702 ~ 22689679 (+)
LOC122342965 NA coding upstream 604325 22613115 ~ 22621886 (+)
LOC122343152 NA coding downstream 122195 23351927 ~ 23375871 (+)
LOC122342330 LOC101883771,LOC101885620,LOC108191338 coding downstream 383746 23613478 ~ 23614930 (+)
LOC122342945 LOC107563545 coding downstream 404066 23633798 ~ 24144571 (+)
LOC122343046 NA coding downstream 855227 24084959 ~ 24091352 (+)
kdm5a kdm5a,LOC107710764 coding downstream 864148 24093880 ~ 24112912 (+)
LOC122343191 NA non-coding upstream 32349 23187316 ~ 23193862 (+)
G30628 NA non-coding upstream 83132 23066254 ~ 23143079 (+)
G30637 LOC107741456,LOC107727338,LOC107685875,LOC107561645,LOC107563546,LOC107569100,LOC107670352 non-coding upstream 94506 23131314 ~ 23131705 (+)
G30624 NA non-coding upstream 99688 23006974 ~ 23126523 (+)
G30607 NA non-coding upstream 356508 22853481 ~ 22869703 (+)
G30652 NA non-coding downstream 33865 23263597 ~ 23264466 (+)
G30653 NA non-coding downstream 34801 23264533 ~ 23264741 (+)
G30654 NA non-coding downstream 36134 23265866 ~ 23266302 (+)
G30658 NA non-coding downstream 44773 23274505 ~ 23282812 (+)
G30674 NA non-coding downstream 170324 23400056 ~ 23539037 (+)
LOC122342321 LOC107741609,LOC107575420,LOC107710255 other upstream 58204 23163695 ~ 23168007 (+)
G30632 NA other upstream 66455 23157559 ~ 23159756 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other upstream 96022 23129106 ~ 23130189 (+)
LOC122342317 NA other upstream 446072 22777983 ~ 22780139 (+)
LOC122343019 LOC107705900 other upstream 543499 22661826 ~ 22682712 (+)
LOC122342976 usp15,LOC107685889 other downstream 887557 24117289 ~ 24131487 (+)
LOC122342990 NA other downstream 903318 24133050 ~ 24141446 (+)
LOC122343028 pacsin2,LOC107725788,LOC107569113 other downstream 1224538 24454270 ~ 24466400 (+)
LOC122343023 LOC107568558,LOC107685877,LOC107725785,LOC107728057 other downstream 1235722 24465454 ~ 24471450 (+)
LOC122343159 NA other downstream 1406620 24636352 ~ 24638654 (+)

Expression


Co-expression Network