mtfp1 (mtfp1,LOC107565646,LOC107566856)


Basic Information

Item Value
gene id mtfp1
gene name mtfp1,LOC107565646,LOC107566856
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 18199050 ~ 18202131 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237489.1
TGATTTGTAGACGCTCCCTCAGCGGCAGTATGGCGCGCCTGACTGTATGTGAAGATCAGAACAACATCAGAAcaatctgatctgatctgatccgAGATCTGCGCAAGATATCAAACACACACGGGTCAGGATGAAAGACACCGCCGACACACACAGCAAAGAAGTGGACATTTATCGGGACACATGGGTGAGATTTCTAGGTTACGCTAACGAGGTGGGCGAGGCGTTCCGCGCGCTGGTGCCGGTCAGCGCTGTGTGGGCCAGTTACGCCGTGGCCACCGCTTACGTGTCCGCTGACGCGCTGGACAAGGGCAGGAAAGCAGCTGCGGCTCACACTGAGGATCATGGGAAGGCGGTGCGGGTGGCCGTGGCTGTGGTCGATACCTTCATTTGGCAGACTTTGGCTTCGGTGGCTATTCCTGGATTCACCATCAACCGTGTCTGTGCCGCATCCCTCTTCCTGCTCGGAAAAACCACCCGCTGGCCACTTCCTGTTCGCAAGTGGACCACGACCGCCATCGGCCTCTCCACCATCCCCTTCATCATCACACCCAtcgacagGTCGGTGGATTTCTTGTTGGACTCCAGTCTGCGGAAACTCTATGGTGAAGGAGAAAAGCACGACTGAGCCTCATCACAGCACCCCTGTGacccctgacctctgacccctgcaGCCAGCTCGAGCAGCGGTCTGTGATCATCAGCAGAAACGTGTCTGACGCTGACTTTATTTGTTCGGATGAACCGTGCCTCTCTCAGAACTCTGTCTGCATGCATCTCTCTTGAGAACGGTTTTCTGCAGCTGTTTGTTTTCAGGTGTTTACTTTGGATCTTTTCTCACATTATTAttggatttttatttctggTGAATGGTTGAAGAATCCAGTACTGTATGTTTCTGTGGAAATGACTGGAATCTGGAATCAATGATGTGTTTCTCTCTGAGGATGTTTAGTGTCAAGGTTAAAGGGATCAGCAGGTTTTCAGAAGCCATAAACTCTATGCAACTTCAGTTCTGAATGTTCTGCTGGAGCACAAAGCGGCATTAAACACACCATTTTGATCCA

Function

symbol description
mtfp1 Predicted to be involved in mitochondrial fission. Predicted to act upstream of or within apoptotic process. Predicted to be located in mitochondrial inner membrane. Predicted to be active in mitochondrion. Is expressed in visceral fat. Orthologous to human MTFP1 (mitochondrial fission process 1).

NR:

description
mitochondrial fission process protein 1-like

GO:

id name namespace
GO:0006915 apoptotic process biological_process
GO:0000266 mitochondrial fission biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K17981 MTFP1, MTP18; mitochondrial fission process protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237489.1 True 1067 mRNA 0.51 4 18199050 18202131

Neighbor

gene id symbol gene type direction distance location
LOC122343062 NA coding downstream 2529 18193309 ~ 18196521 (-)
tbx3a LOC107742157,LOC107597930,LOC107687999,LOC107728866,LOC107566860,LOC107670392 coding downstream 131885 18059325 ~ 18067165 (-)
tbx5a tbx5,LOC107670381,LOC107729059,LOC107745406,LOC107688016 coding downstream 157102 18028498 ~ 18041948 (-)
rab14l Rab14,rab14,LOC105889591,LOC107566859,LOC101069277,LOC103390174,LOC103045876,LOC107670386,LOC107674917,LOC107729136 coding downstream 229482 17963589 ~ 17969568 (-)
spra LOC107597947 coding downstream 266631 17927787 ~ 17932419 (-)
wbp1 LOC107670394,LOC107728527,LOC106563291 coding upstream 11416 18213547 ~ 18218528 (-)
LOC122343150 LOC107570416,LOC107749047 coding upstream 173196 18375327 ~ 18431434 (-)
LOC122342232 LOC107685875,LOC107749047,LOC107728228,LOC107671223 coding upstream 243321 18445452 ~ 18476759 (-)
ptprr ptprr,LOC107684538,LOC107709966,LOC107690749,LOC107747646 coding upstream 323875 18526006 ~ 18544653 (-)
LOC122343050 LOC107685395,LOC107754219,LOC107554754 coding upstream 366032 18568163 ~ 18571675 (-)
G29487 NA non-coding downstream 213232 17985013 ~ 17985818 (-)
G29457 NA non-coding downstream 258261 17873152 ~ 17940789 (-)
LOC122343170 NA non-coding downstream 369107 17828586 ~ 17829943 (-)
G29445 NA non-coding downstream 374786 17823219 ~ 17824264 (-)
G29442 LOC107599601 non-coding downstream 376580 17819360 ~ 17822470 (-)
G29656 NA non-coding upstream 178859 18380990 ~ 18409895 (-)
G29662 NA non-coding upstream 233514 18435645 ~ 18465837 (-)
G29663 NA non-coding upstream 234436 18436567 ~ 18461313 (-)
G29680 LOC107747644,LOC107709964,LOC107690747,LOC107687572,LOC107562152 non-coding upstream 354369 18556500 ~ 18559281 (-)
G29682 trim24,LOC107562152,LOC107690747,LOC107747644 non-coding upstream 361023 18563154 ~ 18564445 (-)
G29473 NA other downstream 219128 17970605 ~ 17979922 (-)
LOC122342228 scgn,LOC107693759,LOC107757885,LOC107669120,LOC107714763,LOC107747999,LOC107663245 other downstream 454507 17734606 ~ 17744543 (-)
G29417 NA other downstream 462776 17735350 ~ 17736274 (-)
srd5a3 srd5a3,LOC107755245,LOC107683999,LOC107665336,LOC107601910 other downstream 560308 17637023 ~ 17638742 (-)
xrcc3 xrcc3,LOC107755221,LOC107683971,LOC107560377 other downstream 1076921 17118343 ~ 17122129 (-)
G29653 LOC107663329,LOC107575399,LOC107749046,LOC107758217,LOC107576964,LOC107665206,LOC107571858,LOC107671223,LOC107576424 other upstream 206429 18408560 ~ 18428343 (-)
LOC122343054 NA other upstream 453113 18655244 ~ 18661653 (-)
LOC122342944 LOC107581743 other upstream 490871 18693002 ~ 18735640 (-)
LOC122343082 NA other upstream 696676 18898807 ~ 18902552 (-)
LOC122343130 NA other upstream 714195 18916326 ~ 18917533 (-)

Expression


Co-expression Network