LOC122343134


Basic Information

Item Value
gene id LOC122343134
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20157155 ~ 20160273 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237490.1
AAAGGGCTGACAATGTGTATGAAAATTACAACGTTAAACCTGTTCGATCTGGAAGAGAGATCACTGACCGCAACACATTGAGAATCCAGTCGTCTGAACTCACAGGAAATGATTCTGTGAAGATCAGAGCAGCTTTGGTGTGTTtggtgctgctgtgtgttcttCTGCTGATCTCAGTCATAGTGCTGTGTGTCACCTTCAATCAAGAGAGACAACAACTACTAACTATGATCACCAGCCACACAGAAGAGAGACGACAGCTACTAACTAACATTACCAACTTAATTCAGCTAAACGTACAGTTCATTCAAGAGAAAAATGAACTGTTAAAGTTTATTCAAGATGGATGGATTTACTATCAGTTCGGTCTTTACTACGTTTCCAATGAGACGAAGAACTGGACTGAGAGCAGAAGATACTGtacagagagaggagcagatcTAGTGATCATAgagaacagacaaaaacaaGATTTCATGAAGAAAATATCCAATGGAAGTGACGTCTGGATTGGTCTGACCGACAGTGAAGTAGAGGGAACATGGAAATGGGTTGATAACAGCACACTGCCCTCTGACTCTGGGTTCTGGAAACAAGGAGAACCCAATGGAGGTACAGATGAGAACTGCGCTTTCAGTGGTTCAGCAGGACTGTTTGATTATACATGTTCTAACCTTTTAAAATGGATCTGCGAGAGGAAAAATATAGAATGACTGTTATGTACAATACTTTTTCAGCCTAAATATTCTAGAAAACTTAAACAACAAAATCTTTTGAgtaattttgacatttacaatttttctcTTAACCGTTAAcctataatgtaaaatgttgtaGCATTTTTAAAGTCTATACAATTTTGAACTCACACTTTTATCATATTTGTTATCTTGCTCGCAGCCCTGTAAAGCTCATtaagtataaatgtgtataaattaCAGgcattatttga

Function

GO: NA

KEGG:

id description
K06563 CLEC4M, DC-SIGN2, CD209, CD299; C-type lectin domain family 4 member M

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237490.1 True 952 mRNA 0.38 5 20157155 20160273

Neighbor

gene id symbol gene type direction distance location
LOC122343109 NA coding downstream 6497 20147935 ~ 20150658 (-)
LOC122342264 LOC107572684 coding downstream 11510 20145055 ~ 20145645 (-)
trnal-cag_24 NA coding downstream 49416 20107657 ~ 20107739 (-)
trnal-aag_24 NA coding downstream 50196 20106877 ~ 20106959 (-)
trnal-aag_23 NA coding downstream 50968 20106105 ~ 20106187 (-)
LOC122343114 NA coding upstream 4436 20164709 ~ 20166414 (-)
LOC122342268 NA coding upstream 81342 20241615 ~ 20251885 (-)
LOC122343064 LOC107723244,LOC107659594 coding upstream 103387 20263660 ~ 20266849 (-)
LOC122343007 LOC107723241,LOC107659605,LOC107550566 coding upstream 106688 20266961 ~ 20269906 (-)
LOC122343112 NA coding upstream 170174 20330447 ~ 20333281 (-)
G29900 NA non-coding downstream 3710 20152894 ~ 20153445 (-)
G29889 NA non-coding downstream 9856 20145707 ~ 20147299 (-)
LOC122343174 NA non-coding downstream 12667 20142703 ~ 20144488 (-)
G29853 NA non-coding downstream 176432 19980489 ~ 19980723 (-)
G29851 NA non-coding downstream 176796 19979957 ~ 19980359 (-)
trnal-aag_25 NA non-coding upstream 50283 20210556 ~ 20210638 (-)
trnal-aag_26 NA non-coding upstream 52189 20212462 ~ 20212543 (-)
trnal-cag_25 NA non-coding upstream 52968 20213241 ~ 20213322 (-)
trnal-aag_27 NA non-coding upstream 53976 20214249 ~ 20214332 (-)
trnal-aag_28 NA non-coding upstream 55887 20216160 ~ 20216239 (-)
LOC122343146 NA other downstream 147443 20000988 ~ 20009712 (-)
LOC122342243 NA other downstream 819663 19333729 ~ 19337492 (-)
G29787 NA other downstream 1225280 18931536 ~ 18931875 (-)
LOC122343130 NA other downstream 1239622 18916326 ~ 18917533 (-)
LOC122343082 NA other downstream 1254603 18898807 ~ 18902552 (-)
G29902 NA other upstream 76864 20237137 ~ 20238554 (-)
G29906 NA other upstream 120833 20281106 ~ 20282400 (-)
LOC122343123 NA other upstream 698150 20858423 ~ 20864406 (-)
LOC122343098 NA other upstream 888584 21048857 ~ 21053725 (-)
LOC122343113 LOC107749046 other upstream 1115949 21276222 ~ 21279043 (-)

Expression


Co-expression Network