LOC122343152


Basic Information

Item Value
gene id LOC122343152
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 23351927 ~ 23375871 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237507.1
GCAGATAGACTTGACACAGTAGATAAGATGGTGATGTGTTTTGGACCAGATGAAGCTGTGAAGGTCATGGTAGACGTCCTGAGAAAGATAAACCAAAATGATCTGGCTGAACAGTTGCAGAATGAACACAAGCaagCTCAGACTGAGGACAATATGAAGACATCTGTCCCTGTTAGAGagctgcaaaatgtcttgaaaactcacaaaaacaacatgaagatgaaggcaaaatacatttttgagggCAACAAAGAAACTGACACAGATCTGAAAGCTGTTTACACAGatctgttcatcacagaggGAGATATGAAAGATGTAAATCAGGAACATGAGATTCTGAAGATTGATGATGctttcaagaacaaaaaaacacaggacaaaccaatcaaatgcaatgatatatttactgaactAAGGAAAAACAATGAGTTAAAGATTGTGTTGACCAAAggagtcgctggcattggaaaaactgtgtctgtgcacaagttcatcctggactgggccGAAGGAGAATCTAATCAGGATATAGACTGTGTGTTCCTgcttccattcagagagatCAATGTGATTAAAAGAGAGATCAGTCTCCATGAGTTTCTGCTGAAATTTAATCCTGAATTGATGTACCTAGAGAAATCAAAGttatatacagaatataaacttgtgtttatatttgatggacttgatgagAGTCGACTGCCTTTGATTTTTGAAAGTGATGCATTGAACACTGTTGAGGAAAGATCATCTGTAGATGTGCTCTTTACAAGTCTGGTCAAAGGTAAACTGCTTCCATCAGCTCTTGTCTGGGTCACATcacgaccagcagcagccaatcagatccctccTCAGTATGTAGGATTGTTCACAGAAGTGCAAGGATTCACTGCTACAAAGGAGGAGTACTTCAGAAAGAAATTCACAGATGAGAGTCTGTcctccagaatcatctcacacattaagacgtctcgtagtctctacatcatgtgccacattcctgtgttctgctggatcacagccacagtacttcaggatattctcactgagaacaatgaagagaacatcagcacaacactcactgaaatgtacattcacttcctgAGGATACAGATGAACATGAAGTGTCAGAAATATGGCAAACAACAAGAAGGAGAATGTTCAGAGCACttacttttaaatagaaagatGATTCTGAAGTTAGCCAAGCTAGCGTTTGAACAGCTGAAGcaggaaaacattgtgttctatGAGAAAGATCTGAAAGCATGTGGTATTGATGTGAGTAAAGATGCTGAGTTCACAGGAATGATCGCTCAGATCTTTAAGAAGGAAGTTGGACTTTATAAGACAAAGGTCTTCTGCTTTGTGCATCTGAGCGTTCAAGAGTTCCTCGCTGCAGTGCATGTGTTCATCtgttacctgaaaaaaaacaagcaagagctgaagtttttctttgatgatTCACAAACTACAGTCATACAAAAGAGAGCCATTGAAAAAGCAATGCAGAGTAAGAGAGGGCATCTGGACCTGTTCCTGCGGTTTCTGATGGGAATTTCACTGGAATCCAGTCAAAATCTGCTCAAAGGcctgctcacacacactgaagacaCCACAGAGAGCATCAGAAATCTAAGTGCACATATTAAAGAATTACAACAACAGGACATCTCAGATGAAACTTCAGTCAACCTGTTCTACTGCTTACTTGAGCTCAAGGATAATTCATTATATGAGGAAATCCAGAGTTACctcagttcaaatgaacatccaGGAAGAGATCTCTCATCTTCAATGTGCACAGTGTTGACCTACATACTACTGATGTCAGAGAAGGTGCTAGATGAGTTCAACCCAAAGAGGTTCACATCAAAACTAGCAGACTACAAGAGACTCATTCCAGCtgtgagatgctgcagaaaagctctGCTGTGTGGGTGTCATCTCACTGCTCTGTCCTCTATAAGTTTATCTTCAACTTTACAAtcatcaaactctgtcctgaaagagctggacctgagtaacaatgatctgcaggattcaggagtgaagcgtCTTTCTGATGGACTCAATAGTCCAGTCTCTAAACTGGAGATACTAAGATTTTCcacatgtaatctcactgcacagtcttgtgggagtttgtcttcagttttacaatcctcaaactctgtcctgaaagagctggacctgagtaacaatgacctgcaggattcaggagtgaagcttcttttggatggactgaagagtccaaactctaAGCTGGAGATACTGAGattttccacatgtaatctcactgcacagtcttgtgggagtttgtcttcagttttacaatcctcaaactctgttctgaaagagctggacctgagtaacaatgatttgcaggattcaggagtgaagcttcttTCTGATGGACTCAATAGTCCAATTTCTAAACTGGAGATACTAAGATTTTCCACATGTAATATCACTGCACAGTCTTGTgggagtttgtcttcagttttacaatcctcaaactctgtcctgaaagagctggacctgagtaacaatgatctgcaggattcaggagtgaagcttctttctgaaggactgaagagtccaaactctaGACTGAAGATACTGAGGTTGTCTGGCTGcatggtgacagaggaaggctgtggttatgtgtcttcagctctgacttcaaacccctcacacctgagagagctggatctgagctacaatcatcctggagattcaggagtgaagctgctctctgaaaaactggaggatccaaactgctcactaaataaactcaatgttgagcatggaggagaatccaggattacagcaggactcaaaaaatgggtgtgttttttcacactggatccaaacacagcacacactcatCTCAGACTGTCTGAGGAGAATAGAGAGGTGACGTTtgtgtctcagtctcagtcgtatcctgatcatccagacagatttgatggtGTGTATcctcaggtgttgtgtagagagagtgtgtgtggacgctattactgggagactgagtggagTGGAGGTGTGGagatatcagtgtcatataagaacatcagcaggaagggacCGGGTGAAGAGTGTTTGTTTGGAtataatgatcagtcctggagtttgatctGCTCTCCTCACAGTTACTCCTTCATACACAATAAGATAAAGACTGATCtctctgtgaagcccatcaTCAGAAGAACAGGAGAGTATGGAGATATctacagagtaggagtgtatgtggatgagagcgcaggaactctgtccttcttcagcgtctctgactcaatgagactcatccacacagtccagaccacattcactcagacactctgtcctgggtttagtttttattattctggatcatcagtgaaactgtgttgatgaatcagaagtGACTGATGAGATTCTACCCAGAATGCTTTGAGCTGCTTGATGAATCAGTAACAGTGAGATGTTATGAGTCTCTTCAATACATTAATACTTCAGCTCAACTTCTATAGAAACAGGAAGataagaattaataattcatctaaaaaatagatataaaagaagaaatgtgtcagaaatagaaagatctgtgtcagtgtgtgtgtgtgtacttaaaaatattacatttggttttgatttgacttattgatatcattattattatttgttattattatgaaatactgaATTTGTTCCTAATAAAGACACTATCCTTATAAAa

Function

GO:

id name namespace
GO:0042981 regulation of apoptotic process biological_process
GO:0006915 apoptotic process biological_process
GO:0048518 positive regulation of biological process biological_process
GO:0048522 positive regulation of cellular process biological_process
GO:0010941 regulation of cell death biological_process
GO:0010942 positive regulation of cell death biological_process
GO:0043065 positive regulation of apoptotic process biological_process
GO:0043067 regulation of programmed cell death biological_process
GO:0043068 positive regulation of programmed cell death biological_process
GO:0008219 cell death biological_process
GO:0012501 programmed cell death biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237507.1 True 3730 mRNA 0.41 13 23351927 23375871

Neighbor

gene id symbol gene type direction distance location
LOC122343131 NA coding upstream 122195 23226211 ~ 23229732 (+)
LOC122343008 LOC107575457 coding upstream 168381 23168155 ~ 23183546 (+)
LOC122342997 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding upstream 603307 22739960 ~ 22748620 (+)
LOC122342996 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding upstream 645433 22695800 ~ 22706494 (+)
LOC122343101 NA coding upstream 662248 22685702 ~ 22689679 (+)
LOC122342330 LOC101883771,LOC101885620,LOC108191338 coding downstream 237607 23613478 ~ 23614930 (+)
LOC122342945 LOC107563545 coding downstream 257927 23633798 ~ 24144571 (+)
LOC122343046 NA coding downstream 709088 24084959 ~ 24091352 (+)
kdm5a kdm5a,LOC107710764 coding downstream 718009 24093880 ~ 24112912 (+)
LOC122343029 LOC107717679,LOC107693607,LOC107575410 coding downstream 768861 24144732 ~ 24149459 (+)
G30658 NA non-coding upstream 69115 23274505 ~ 23282812 (+)
G30654 NA non-coding upstream 85625 23265866 ~ 23266302 (+)
G30653 NA non-coding upstream 87186 23264533 ~ 23264741 (+)
G30652 NA non-coding upstream 87461 23263597 ~ 23264466 (+)
G30599 LOC107561645 non-coding upstream 102059 22807988 ~ 23249868 (+)
G30674 NA non-coding downstream 24185 23400056 ~ 23539037 (+)
G30676 NA non-coding downstream 40811 23416682 ~ 23419509 (+)
G30688 NA non-coding downstream 80404 23456275 ~ 23761495 (+)
G30732 NA non-coding downstream 345190 23721061 ~ 23787562 (+)
G30724 NA non-coding downstream 368454 23744325 ~ 23770705 (+)
LOC122342321 LOC107741609,LOC107575420,LOC107710255 other upstream 183920 23163695 ~ 23168007 (+)
G30632 NA other upstream 192171 23157559 ~ 23159756 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other upstream 221738 23129106 ~ 23130189 (+)
LOC122342317 NA other upstream 571788 22777983 ~ 22780139 (+)
LOC122343019 LOC107705900 other upstream 669215 22661826 ~ 22682712 (+)
LOC122342976 usp15,LOC107685889 other downstream 741418 24117289 ~ 24131487 (+)
LOC122342990 NA other downstream 757179 24133050 ~ 24141446 (+)
LOC122343028 pacsin2,LOC107725788,LOC107569113 other downstream 1078399 24454270 ~ 24466400 (+)
LOC122343023 LOC107568558,LOC107685877,LOC107725785,LOC107728057 other downstream 1089583 24465454 ~ 24471450 (+)
LOC122343159 NA other downstream 1260481 24636352 ~ 24638654 (+)

Expression


Co-expression Network