LOC122343156 (LOC107674852,LOC105007321,LOC107551422,LOC103361099,LOC107732279,LOC107677819,LOC107725800)


Basic Information

Item Value
gene id LOC122343156
gene name LOC107674852,LOC105007321,LOC107551422,LOC103361099,LOC107732279,LOC107677819,LOC107725800
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24265349 ~ 24266607 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237510.1
GCGGAGCATGGGCCCCTGATCCACGCACTCATGGAGCCCGAGGACCCTCAGGACCCCGACTCCTTCGACTTCCTCTTCAAGATCATCCTCATCGGAGACTCCAACGTGGGCAAGACCTGCCTGGTGCAGAGCTTCAAGAGCGGCCTGTTCTCCGAGGCGCAGCAGAACACCATCGGAGTGGACTTCACCGTGCGCACGCTGTCCATCGACGGCCGCAGGGtcaagATGCAGGTCTGGGACACGGCGGGGCAGGAGCGTTTCCGCACCATCACACAGAGTTACTACCGAAGCGCTCACGGGGCCATGATCGCGTACGATCTGACCCGGCGGACCACCTTCGAGTCTCTGCGGCACTGGATACAGGGTGTGGAGCAGTACGGCGCCGCCAGCGTCGTCTTTGTCCTGATAGGTCAGAGCTGCGAGGAACTTCTCCATCAGCCAGCTGAGCGCTCGCGACGTCAAATATAGACTTAAACCACCCCTaaggttttaaaagaaaattcaatAATTTAAGACATTCACACGTGCACATTTGTCTgat

Function

NR:

description
PREDICTED: ras-related protein Rab-19-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237510.1 True 541 mRNA 0.58 2 24265349 24266607

Neighbor

gene id symbol gene type direction distance location
LOC122342994 LOC107749047,LOC107685875,LOC107728228,LOC107570416,LOC107671223 coding downstream 45341 24207655 ~ 24220008 (-)
LOC122343128 LOC107728228,LOC107569032,LOC107685875,LOC107705465,LOC107574018 coding downstream 335815 23816849 ~ 23929534 (-)
LOC122343107 LOC107566978,LOC107575457,LOC107561645,LOC107655025 coding downstream 537431 23725752 ~ 23727918 (-)
LOC122343073 NA coding downstream 1006030 23256365 ~ 23259319 (-)
LOC122342325 LOC107741456 coding downstream 1014735 23240075 ~ 23250614 (-)
LOC122342338 NA coding upstream 46235 24312842 ~ 24319112 (-)
ckap4 NA coding upstream 210389 24476996 ~ 24479914 (-)
LOC122343108 LOC107677819,LOC107725800 coding upstream 218755 24485362 ~ 24492499 (-)
LOC122342346 LOC107581033 coding upstream 275531 24542138 ~ 24544170 (-)
LOC122342998 NA coding upstream 291525 24558132 ~ 24564000 (-)
LOC122343167 NA non-coding downstream 49777 24212067 ~ 24215572 (-)
G31088 NA non-coding downstream 137441 24126947 ~ 24127908 (-)
G31090 NA non-coding downstream 139688 24122812 ~ 24125661 (-)
G31082 LOC107710764 non-coding downstream 164482 24100450 ~ 24100867 (-)
G31072 NA non-coding downstream 228598 24036349 ~ 24036751 (-)
G31115 NA non-coding upstream 32173 24298780 ~ 24540339 (-)
G31127 NA non-coding upstream 38648 24305255 ~ 24312292 (-)
LOC122343180 NA non-coding upstream 47183 24313790 ~ 24314321 (-)
G31142 NA non-coding upstream 65270 24331877 ~ 24332563 (-)
G31152 NA non-coding upstream 158320 24424927 ~ 24433401 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other downstream 154676 24110224 ~ 24110673 (-)
G31050 NA other downstream 493581 23745486 ~ 23771768 (-)
G31017 NA other downstream 718980 23478525 ~ 23546369 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other downstream 828334 23416891 ~ 23437015 (-)
G30457 NA other downstream 2048879 22216035 ~ 22216470 (-)
G31134 NA other upstream 37489 24304096 ~ 24497596 (-)
G31120 NA other upstream 39894 24306501 ~ 24495178 (-)
LOC122342340 NA other upstream 57363 24323970 ~ 24327263 (-)
LOC122342407 LOC101068103,LOC105418166,LOC106522608,LOC108412963,LOC105419408,LOC108431938,LOC107395447,LOC106674638 other upstream 487449 24754056 ~ 24760786 (-)
G31314 NA other upstream 1292433 25559040 ~ 25561198 (-)

Expression


Co-expression Network