kcnj8 (kcnj8,LOC107725582,LOC107655555,LOC107729834,LOC107690420,LOC107587158,LOC107595650)


Basic Information

Item Value
gene id kcnj8
gene name kcnj8,LOC107725582,LOC107655555,LOC107729834,LOC107690420,LOC107587158,LOC107595650
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 7365554 ~ 7368988 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237536.1
ACGGGCAGATGCGGTTGATGGAGTCTTTAGAAGTAGTTGAGAGGGTGAACGTCTCTCGGAGGCAGCAGGACAGTGATGTACCGCCCATGCGCGTGAAGTCCTGAAGGAGCGCAGCACAATCATCAGAAAGATACTTTTTTGAAGCCTTTACGCGCGACCTGCTCAGATAATGCTGCCGCGCAAAAGCATCATTCCCGAAGAGTTCGCGTTCTCCCCGGCGCTCCTGTCGGCGATCCCCCGCAAGCCCGTGTTCAGGGACCGCGTGAACAAAGCGCGCTTCATCGCCAAGAACGGCGCGTGCAACCTGTCGCACAAGAACATCCGCGAGCAGGGCCGATTCCTGCAGGACGTGGTCACTACTTTGGTGGATCTCAAATGGCGTTTCACCCTGGTGATTTTCTCCATGACGTTCCTGTGCAGCTGGCTGCTGTTCGCTATGTTCTGGTGGCTGGTGGCCTTTGCGCACGGAGATCTGGACGCTAACCTGAAACCTGAAGTAAAGCAGTGTGTCACTAATGTCAGctcCTTCACCTCTGCCTTCCTCTTCTCCATCGAGGTGCAGGTGACAATAGGATTCGGGGGTCGCATGATAACGGAGCAGTGCTCCACAGCCATCACGTTGCTCATATTCCAGAACATCATCGGCCTGATAATTAACGCCATCATGCTGGGCTGCATCTTCATGAAGACGGCCCAGTCGCACCGGCGCGCCGAGACGCTCATCTTCAGCCGCAACGCCGTCATCGCCGTGCGCAACAACCGCCTGTGCTTCATGATCCGGGTGGGGGATCTGCGCAAGAGCATGATCATCAACGCGGTGGTGCGCCTCCAAGTGGTCCGGAAAACCACTACGCCGGAGGGCGAAGTCATACCCATCCACCAGATCGACGTCCAGACAGAAAGCGCAGTCGCGGGCAACAACATCTTCCTGCTGGCCCCCCTGATCATATGCCACGTCATCGATAAGGACAGCCCCCTGTACGACCTCTCGGCGatggagctgcagtgtagcGACCTGGAGCTCATCGTGATCCTGGAAGGCGTGGTGGAGACCACGGGCATCTCCACTCAGGCTCGCACCTCGTACGTGACCGAGGAGATCCAGTGGGGCCACCGCTTCGTGCCGATAGTGACCGAGGAGGAGGGCGTGTACTCGGTGGACTACTCCAAGTTCGGGAACACGGTCAAGGTGGACCCGCGCTGCAGCGCTCGCGAGCTGGACGAGAAGCCCTCCATCCTGATCCAGACGCTCCAGAAGAGCGAGCTGTCGCACCAGAACTCCTTGCGGAAGAGGAACTCCATGCGCCGGAACAACTCTATGCGCAAGAACAACTCCATGCGACGCAACAATTCTGCCCTCGCCGTGCCCAAAGTGCAGTTCCTCACCCCCGAGGGGGGACCCAATCTAGCAGTCACATGACAAACGGCCCGCTTAGCGATTTTCAcctgtctttgtctttctctcgGTCCTTGTCATGCTCTTTTCTACGGTTTCCTGTGTTCTTTGATCCTTCCTTTCCTCGGCAACTCCGGCCCTCCCGATTGACtttttcctgcagagttcagcctTAAAGGGCCCCtgtgggttatgaaaggttcacaTTACGGTTTTGGGAGATTGACATGCATGCGActgtcattttcttataatacgCATTTATAAACGACTCCCAAATGATCTGTTCGACGATTAATTTTTTCCCAAATCCCtccggtgattggtcgatttcatttaaagcagtgtttgtgagcttttaactcTCCAGAAGAGGCATCTGGTGGCGAAGAATTCATctgcgttttcattcagaccaacgcaaaaAGATCAACGAGTGGgcaggcaatatgctaatgtttcttTCTGACGTCAACATAAAACGACTTGgggctcatttttaaaaaaagactcgttttaatgattcagagtcgacagTAACTTTATatacggtgcactttcagacaTACTACTTTGcacaatgttttcattcactgttaCACACTTcatgaaaatatcttttttttttaaatccataaaaGAGGCGCTTTAATGAAATACCCCACTTGCTGCAGCGCCAGTGAACTGGACAAGACGTCCTCCATCCTGATTCAGAGAGCTGCTGCTTCACAACTATTTTCACCAAGACAAACTCCATGTGACAGAATAACTCTGTGTGCAACCCATATAGTTTGGACATTTCCATCAGGCGCTTCAACCCTAATAAACTGCGCCAGAACAAGCTAATCAAGATCTTTAGGATTACTTGGCCCTGTGGTCTTCCTCTAAGTGTTTACActatatggaaaaaaagagatgcaCGATAAAAGAGAGGGTTTTCACAGCgataagaaaagaaacattacTGGTTACCAAAAAACCCTTCAGTGCACAGTTGTTAAAACAGGTGAACATCTGTGAATggtgatcattttaaaatactcttttctctatatatataaaaagaaaaatacttccATTTTTGCACAGCCTATCACTGTATAGCTCTGAAATCAAATGCATTGTACTGCGGACAATGACTGTACGTTTCACAATTAAATAAAGTCGATGAGCTTGTCATTCATCA

Function

symbol description
kcnj8 Predicted to enable ATP-activated inward rectifier potassium channel activity. Predicted to be involved in potassium ion import across plasma membrane and regulation of ion transmembrane transport. Predicted to act upstream of or within potassium ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Used to study hypertrichotic osteochondrodysplasia Cantu type. Orthologous to human KCNJ8 (potassium inwardly rectifying channel subfamily J member 8).

NR:

description
PREDICTED: ATP-sensitive inward rectifier potassium channel 8

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015272 ATP-activated inward rectifier potassium channel activity molecular_function

KEGG:

id description
K05001 KCNJ8, KIR6.1; potassium inwardly-rectifying channel subfamily J member 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237536.1 True 2582 mRNA 0.50 4 7365554 7368988

Neighbor

gene id symbol gene type direction distance location
abcc9 abcc9,LOC107725580,LOC107655566,LOC107690381,LOC107583096,LOC107587156,LOC107729856 coding upstream 1096 7331871 ~ 7364458 (+)
nuak1a nuak1a,nuak1,LOC107587153,LOC107729860,LOC107690659,LOC107582835,LOC108439414 coding upstream 180194 7172472 ~ 7185360 (+)
prl2 prl2,LOC107655571,LOC107587154,LOC107725674,LOC107582933,LOC107729861 coding upstream 196423 7165557 ~ 7169131 (+)
pphln1 LOC107725587,LOC107655578,LOC107587147,LOC107582222,LOC107729837 coding upstream 395136 6954797 ~ 6970418 (+)
pdzrn4 pdzrn4,LOC107587183,LOC107725536,LOC107581937,LOC107694264,LOC107729830 coding upstream 447307 6890949 ~ 6918247 (+)
LOC122343893 NA coding downstream 1147 7370135 ~ 7370275 (+)
cmasa LOC107725656,LOC107676932,LOC107587160,LOC107690429,LOC107583561 coding downstream 2035 7371023 ~ 7375055 (+)
LOC122343892 NA coding downstream 4866 7373854 ~ 7373994 (+)
shisal1a LOC107583751,LOC107690459,LOC107725687,LOC107729866,LOC107676911 coding downstream 54189 7423177 ~ 7451653 (+)
psmc2 psmc2,LOC107587164 coding downstream 108669 7477657 ~ 7481279 (+)
G26669 pus7l,LOC107591455 non-coding upstream 277195 7083300 ~ 7088359 (+)
LOC122343425 NA non-coding upstream 304512 7057424 ~ 7061042 (+)
LOC122342579 NA non-coding upstream 351893 6985243 ~ 7013661 (+)
G26585 grip1,LOC107587171,LOC107655593 non-coding upstream 961155 6399167 ~ 6404399 (+)
G26517 LOC107655597,LOC107725654,LOC107757228,LOC107560265,LOC107587133 non-coding upstream 1067474 6216841 ~ 6298080 (+)
LOC122342925 NA non-coding downstream 221573 7590561 ~ 7636680 (+)
LOC122342735 NA non-coding downstream 746900 8115888 ~ 8123874 (+)
G26994 NA non-coding downstream 756271 8125259 ~ 8125994 (+)
LOC122342736 NA non-coding downstream 760173 8129161 ~ 8132328 (+)
G27066 NA non-coding downstream 806477 8175465 ~ 8175799 (+)
G26692 NA other upstream 138117 7187940 ~ 7227437 (+)
vhll NA other upstream 974627 6388543 ~ 6390927 (+)
LOC122342837 grm4,LOC107549321,LOC107716363,LOC107708172,LOC107569297,LOC107666973,LOC107678149 other upstream 1466727 5862607 ~ 5898827 (+)
LOC122342465 LOC107560737,LOC107742176,LOC107757234,LOC107690649,LOC107589816,LOC107694311,LOC107673148,LOC107559271,LOC107738440,LOC107670367,LOC556054,LOC108414180 other upstream 1503241 5781944 ~ 5862313 (+)
pcloa pcloa,LOC107757237,LOC107694308,LOC107577557,LOC107560734 other upstream 1967668 5354332 ~ 5397886 (+)
akr1b1.1 akr1b1,LOC107725653,LOC107676909,LOC107587163,LOC107591878 other downstream 44948 7413936 ~ 7463373 (+)
ube2h ube2h,LOC107676921,LOC107690610,LOC105888480 other downstream 163924 7532912 ~ 7558489 (+)
col7a1l col7a1l,LOC107725642,LOC107744879,LOC107676908,LOC107555540,LOC107592433,LOC108435442 other downstream 672444 8041432 ~ 8100749 (+)
G26993 NA other downstream 768750 8137738 ~ 8138439 (+)
G27079 NA other downstream 878924 8247912 ~ 8249223 (+)

Expression


Co-expression Network