Item | Value |
---|---|
gene id | CI01000004_10376389_10423302 |
gene name | DLGAP1A, DLGAP1 |
gene type | coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000004 |
NCBI id | null |
chromosome length | 17451736 |
location | 10376389 ~ 10423302 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
symbol | description |
---|---|
dlgap1a | Predicted to enable molecular adaptor activity. Predicted to be involved in regulation of postsynaptic neurotransmitter receptor activity. Predicted to act upstream of or within chemical synaptic transmission. Predicted to be located in plasma membrane and postsynaptic density. Predicted to be active in glutamatergic synapse and postsynaptic specialization. Is expressed in central nervous system; olfactory bulb; and olfactory placode. Orthologous to human DLGAP1 (DLG associated protein 1). |
dlgap1 | Predicted to enable molecular adaptor activity. Predicted to be a structural constituent of postsynaptic density. Predicted to be involved in several processes, including aggresome assembly; regulation of postsynaptic neurotransmitter receptor activity; and regulation of proteasomal protein catabolic process. Predicted to be located in plasma membrane. Predicted to be part of postsynaptic density. Predicted to be active in glutamatergic synapse and postsynaptic density, intracellular component. |
id | name | namespace |
---|---|---|
GO:0016020 | membrane | cellular_component |
id | description |
---|---|
K15008 | DLGAP1, GKAP; discs, large-associated protein 1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
CI01000004_10376389_10423302.mRNA | True | 2976 | mRNA | 0.59 | 10 | 10376389 | 10423302 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000004_10169407_10212947 | CDH18 | coding | upstream | 163200 | 10169407 ~ 10213189 (+) |
CI01000004_10058538_10090881 | CDH12A | coding | upstream | 285340 | 10058538 ~ 10091049 (+) |
CI01000004_09980195_09995816 | CDH10A | coding | upstream | 380496 | 9980195 ~ 9995893 (+) |
CI01000004_09684489_09685469 | MC4R | coding | upstream | 690377 | 9684489 ~ 9686012 (+) |
CI01000004_09627968_09635256 | RNF152 | coding | upstream | 740588 | 9627968 ~ 9635801 (+) |
CI01000004_10434104_10435287 | PTF1A | coding | downstream | 8531 | 10431833 ~ 10435569 (+) |
CI01000004_10514814_10550774 | NA | coding | downstream | 91512 | 10514814 ~ 10550920 (+) |
CI01000004_10582152_10586349 | HTR5AB, HTR5A, HTR5AA | coding | downstream | 158819 | 10582121 ~ 10586553 (+) |
CI01000004_10610634_10613290 | ENG2B | coding | downstream | 186478 | 10609780 ~ 10613630 (+) |
CI01000004_10630265_10647904 | NA | coding | downstream | 206963 | 10630265 ~ 10647904 (+) |
G30681 | NA | non-coding | upstream | 31411 | 10208466 ~ 10344978 (+) |
G30515 | NA | non-coding | upstream | 469843 | 9906238 ~ 9906546 (+) |
G30505 | NA | non-coding | upstream | 486633 | 9889529 ~ 9889756 (+) |
G30447 | NA | non-coding | upstream | 560304 | 9815811 ~ 9816085 (+) |
G30395 | NA | non-coding | upstream | 613095 | 9759819 ~ 9763294 (+) |
G30688 | NA | non-coding | downstream | 12928 | 10436230 ~ 10447737 (+) |
G30780 | NA | non-coding | downstream | 30300 | 10453602 ~ 10454260 (+) |
G30787 | NA | non-coding | downstream | 51448 | 10474750 ~ 10474951 (+) |
G30689 | NA | non-coding | downstream | 270615 | 10693917 ~ 10697207 (+) |
CI01000004_08976512_08980033 | TTPA | other | upstream | 1395405 | 8976254 ~ 8980984 (+) |
G28859 | NA | other | upstream | 1776786 | 8599235 ~ 8599603 (+) |
CI01000004_08414451_08436256 | NA | other | upstream | 1925162 | 8414316 ~ 8439933 (+) |
CI01000004_07654234_07655677 | MRPL34 | other | upstream | 2720006 | 7654234 ~ 7656383 (+) |
CI01000004_06571261_06572539 | SEP15 | other | upstream | 3801968 | 6570771 ~ 6572667 (+) |
G30797 | NA | other | downstream | 74074 | 10497376 ~ 10497788 (+) |
G31710 | NA | other | downstream | 1213949 | 11637251 ~ 11642400 (+) |
CI01000004_11666900_11667179 | NA | other | downstream | 1241471 | 11666900 ~ 11667659 (+) |
G31865 | NA | other | downstream | 1768828 | 12192130 ~ 12197418 (+) |
CI01000004_12646972_12652534 | NA | other | downstream | 2219452 | 12646838 ~ 12652570 (+) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|---|---|---|---|---|---|
zebrafish (Danio rerio) | XLOC_015509 | dlgap1a | coding | NC_007113.7 | CM002886.2 | 29491314 ~ 29692825 (+) |
bowfin (Amia calva) | AMCG00019250 | NA | coding | CM030124.1 | CM030124.1 | 10757686 ~ 10778417 (-) |