LOC122343240


Basic Information

Item Value
gene id LOC122343240
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 3024248 ~ 3024825 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237574.1
TCTGATAGCACTGGCTTTATAAAGGGGCAGAGGATCAGGAATTATTTATACAGACTCTAATACTACAGTGCGTCATGGCGGTGTCCGGTCATCTCGGGTTGGCGTCTCTGGTCGTGTTGATGCTGGCGTCTCAGCTGGACTTTTCCAGCGCCGCCGTGCTCGTGTATGACTTGCACGCCAACAACCTGTCCGGTGATGCTGCTGGAAACAAACCCGATCCGTACCTCAAGATCTGGTGTGGTGGCTCTTTCGAGGATACAAATTACATCAAAGATAATTCTAATCCTCAGTGGACAGAGAGCTTCACCTTCTCAAGCTGTGATTCCGGCGACAAACTGAAGATGGAGGTGTGGGACAAAGACACGACGTACGACGATCACTTGGGCTGGTACAGTGGACCGGTGGGAATCGGAAACAACaatcacatttctttttctgttggACAAGGCACTATGTATTTAAGCTACGATGTGAAATAAATCTGCTCCAAACACGGA

Function

GO:

id name namespace
GO:0004175 endopeptidase activity molecular_function
GO:0004252 serine-type endopeptidase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008236 serine-type peptidase activity molecular_function
GO:0017171 serine hydrolase activity molecular_function

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237574.1 True 497 mRNA 0.49 2 3024248 3024825

Neighbor

gene id symbol gene type direction distance location
LOC122343283 NA coding downstream 6037 3017632 ~ 3018211 (-)
si:ch211-240l19.8 LOC107658767,LOC107725963 coding downstream 10889 3012766 ~ 3013359 (-)
nudt5 nudt5,LOC107658859,LOC107656337,LOC107726016,LOC107743836 coding downstream 86231 2935107 ~ 2938017 (-)
mcm10 mcm10,LOC107658860,LOC107726070,LOC107743741,LOC107656326 coding downstream 89272 2927805 ~ 2934976 (-)
cdk17 cdk17,LOC107658862,LOC107656329 coding downstream 119959 2863140 ~ 2904289 (-)
wnk1b wnk1,LOC107725976,LOC107658853 coding upstream 2246 3027071 ~ 3094405 (-)
LOC122342759 fbxl14b,fbxl14,LOC107580311,LOC107656333,LOC108279751 coding upstream 329544 3354369 ~ 3356141 (-)
LOC122342755 LOC107676321,LOC107716109,LOC107709941,LOC107655767 coding upstream 375555 3400380 ~ 3402341 (-)
LOC122342398 LOC107584038,LOC107725905,LOC107658738 coding upstream 493864 3518689 ~ 3520928 (-)
LOC122342400 NA coding upstream 496869 3521694 ~ 3526313 (-)
G25625 NA non-coding downstream 27790 2980159 ~ 2996458 (-)
LOC122343423 NA non-coding downstream 486242 2534205 ~ 2538006 (-)
LOC122343417 NA non-coding downstream 735129 2203585 ~ 2289119 (-)
G25362 NA non-coding downstream 740470 2283285 ~ 2283778 (-)
LOC122343454 NA non-coding downstream 841579 2167305 ~ 2182669 (-)
LOC122342459 NA non-coding upstream 91579 3116404 ~ 3117297 (-)
LOC122342458 NA non-coding upstream 92654 3117479 ~ 3119550 (-)
G25673 wnt5b,LOC107656325,LOC103026771,LOC107580320,LOC107744029,LOC107726030 non-coding upstream 355833 3380658 ~ 3676399 (-)
LOC122342758 NA non-coding upstream 377999 3402824 ~ 3403502 (-)
LOC122342757 NA non-coding upstream 391762 3416587 ~ 3417917 (-)
LOC122342805 NA other downstream 2736 3019092 ~ 3021512 (-)
ccdc3a ccdc3,ccdc3a,LOC107725961,LOC107658768,LOC107580337,LOC107744050 other downstream 12034 2999882 ~ 3012214 (-)
LOC122342907 NA other downstream 551180 2472284 ~ 2473068 (-)
dock4b dock4b,LOC107656358,LOC108425388 other downstream 648532 2299635 ~ 2375716 (-)
tnni4a zgc:101560,LOC107725970,LOC107584059,LOC107658770,LOC107656258,LOC107581287 other downstream 926447 2091351 ~ 2097801 (-)
LOC122342819 foxp2,foxp4,LOC107725896,LOC107728618,LOC107656011,LOC107675840 other upstream 509837 3534662 ~ 3577123 (-)
LOC122342822 tmem9b,LOC107674442,LOC107750540,LOC107754675,LOC107585953,LOC107700603,LOC107593285 other upstream 576175 3601000 ~ 3601991 (-)
LOC122342823 scube2,LOC107750541,LOC107585952,LOC107674429,LOC107593229,LOC107700597 other upstream 577531 3602356 ~ 3618367 (-)
shank3b shank3b,LOC107725995,LOC107592218,LOC107656300,LOC107580703,LOC107743477 other upstream 1109152 4133977 ~ 4161828 (-)
G25880 LOC107658814,LOC107726023,LOC107592209 other upstream 1240101 4264926 ~ 4267495 (-)

Expression


Co-expression Network