CI01000004_10436514_10438365



Basic Information


Item Value
gene id CI01000004_10436514_10438365
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 10436499 ~ 10439459 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000004_10436514_10438365.mRNA
AGGAAAATCTTGTGCTGAAAGTCTTTTTCCTGAATTGAATCTTTGGGGTGAAGAGAGGGAGGCCACCTTCAGACGAGCAAAACTCTGGCAGCTTCCCATTTCGCTCTTGTTAGCTGGACATCCCGTGCGCAAAAACCCTGCTTGCCTTGGTGATATTTTATTTTCCAAGGTCCAATGTCATGGCATAACAGTATTTTTTTCTGGAGGTAACTGGCGTCTTTTGTTACAAAAGAGAATGAGGAGCTGCCTAAGGGGGTCATTCTCTCCTTTTATGCTCAATTGAACAATATTTTCTTTTTCTTAAAAATCCTGCACGCGTGCGCGCTTTTGTGCACTTGTTTCCCTGGATCCTGTTTGGCTGCTAAGAAGTTAAATGATTCGCAATAGACACCGGTTGCTGTGTCGAGGGTTTCGTCAGTACAAAGGCTGCTGCTTTCGCACCATATGCTTAATGGACACAGCCGTAAAGGCCATAATAAAGGTAAAACGTGGTCTTTTAAAAGTTGGAAAGGTTCCCTTTATTTGATTTAGATGGGGCAGACTACGTGCGCACAAACCAAAGCGCGCCCGGGCATTGACTCGCTCTTTCTTTTCTGAGGCACTGCAGCCACCACGTAGTGTTTCATTACAACATAAGCTTTTCATCACCCGGCTTTGTTCTGAATGAAAGTAATGCTGTGAATTAAAGAAATGACAATATTTTCTATCAGCTTGAAGGTCCAAGAGAAGGGCTCTCAAGCTTGGCAAAAATCAGGCACATCATTCATCACGTCACCCCGCACCTGTGGTCCTGGCATTCAAAGTATACAAACCTATTCTTATTAACCTTAATTATTCAAAAACGACACAATGGCTGAAATAGAGCAGGTTGAAGTCTGTTTATTGGTCGTAAATGTCTCTCTGAAGATCTCCAAGGCTCTTTGTTAGTCCCGCGCGGAGACCGCTCTTCTCCTTTCAGACATGAGTAGCCTTGGACTTTTCAGTTTTCAATCGTAACATCTGCTTAATCGTACGGATCAAAATATGGAGACACCAAACATATGCAATGGAGGATTTGTTAAATCCGGGTAATGAGTTATTAACAAGACGAAACAATGGAGCAGGATGGTGAGGGCCTTATGTTAACGGAGTCACTTTTCGGAGCGCCTCGCATTACCCTTCCCTCTAAACCGAACGCCAGAGGCCACTTGGACATGGGGGATTTAGTAGGCTTTAAAGAGTTTGGGTATCGGGGAATCAACTGGTGTTTGTTCAAGCTGGCAGCTGGCACCCCGATGCCACTGTTGCCATGCACTAATGAAAATGCGCTGGACTCAAAGATTTTCAGTCTTATCCTCCATATTTTTGCAGGCGATAATCCGAATATGAGCAGATTTAAAGCTTATGAGAATCTTGATAGACGTTGTTCCCAGCTTAGCGCGTATCTTAAGTCTGACTTGCTAACATTTGACTTTCTAATGAGCATAATGGGATTACATGGTTTTAGTCCTGCGCCCTGGATAGCAGGAATCAACGCGTTTAATGAGGCGCTAATACATGGAAAAGTTGGATTATGTCCATCAGTTAAGATTTCATTTAATTCATTAGGAAAGTTCACAATGGAGTTTTTGTCGGATTATTGTTGACACTGATTAAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000004_10436514_10438365.mRNA True 1640 mRNA 0.43 3 10436499 10439459

Neighbor


gene id symbol gene type direction distance location
CI01000004_10290550_10295288 CAHZ coding downstream 141142 10289863 ~ 10295357 (-)
CI01000004_10271350_10272027 NA coding downstream 164293 10271198 ~ 10272206 (-)
CI01000004_09779903_09780536 NA coding downstream 655621 9779235 ~ 9780878 (-)
CI01000004_09754664_09774588 CDH6 coding downstream 661426 9753467 ~ 9775073 (-)
CI01000004_09703159_09711600 NA coding downstream 724501 9701926 ~ 9711998 (-)
CI01000004_10458668_10465442 NA coding upstream 19203 10458662 ~ 10465703 (-)
CI01000004_10553379_10573352 PAXIP1 coding upstream 113578 10553037 ~ 10575243 (-)
CI01000004_10619819_10627261 CNPY1 coding upstream 179560 10619019 ~ 10627261 (-)
CI01000004_10692864_10704094 TRPA1A coding upstream 253178 10692637 ~ 10704094 (-)
CI01000004_10757852_10760211 NA coding upstream 318084 10757543 ~ 10761142 (-)
G31077 NA non-coding downstream 963 10434154 ~ 10435536 (-)
G31060 NA non-coding downstream 10154 10393326 ~ 10426345 (-)
G31070 NA non-coding downstream 25582 10410129 ~ 10410917 (-)
G31056 NA non-coding downstream 50729 10385299 ~ 10385770 (-)
G31042 NA non-coding downstream 65267 10354479 ~ 10371232 (-)
G31089 NA non-coding upstream 16921 10456380 ~ 10458603 (-)
G31105 NA non-coding upstream 41358 10480817 ~ 10481122 (-)
G31140 NA non-coding upstream 102490 10541949 ~ 10542189 (-)
G31135 NA non-coding upstream 105175 10544634 ~ 10550641 (-)
G31139 NA non-coding upstream 170824 10610283 ~ 10611074 (-)
G30316 NA other downstream 1029578 9377937 ~ 9406921 (-)
G29746 NA other downstream 2078372 8354498 ~ 8358127 (-)
G29656 NA other downstream 2470999 7964364 ~ 7965500 (-)
G29388 NA other downstream 3804592 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 3890927 6538904 ~ 6541252 (-)
G31203 NA other upstream 306978 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 968006 11406957 ~ 11412907 (-)
G32150 NA other upstream 1337060 11776519 ~ 11780951 (-)
G32207 NA other upstream 1936709 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 4111341 14541515 ~ 14551352 (-)

Expression



Co-expression Network