ifng1r


Basic Information

Item Value
gene id ifng1r
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 6723047 ~ 6724403 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237599.1
TAGCATCAGGTCACAACGTTGTAAAGTCTCCTGATTCACAGCAGCGAAACACAAACCTTAAAACAAAGAATGGATTCTTGGCTCAACATGGCACTGCTGTGTGGACTTCTGCTGATAGCATCTCTTCAGACAACCAACGCTCTCAGATTTCGACGGTCCAAAAGCAACACGATCCAAACACTGAATACAAAAATCCAGCATCTGCAAGCGCATTATaaaacaaaagGCAAAGAATGGTATGGAAAGACtatttttttgtctcatctggACCAGCTGAATTCTAAGGCTTCCTGCACTTGTCAGGGGCTGTTGCTTGAAAGAATGCTGAAAATCTACGAAGAAATTTTCCAAGAGATGCTGAACAAGTCTAAGGAGAAAGAAGTGACAGTCAATACAAATGATGTTATGACTGAGGCGAAAAGGTCTGGGGAGACAGAAGTGACAGCCaatctaaattatattataactgTGGTTAACAATCTGAAAAAGAAGTACAGTGAAGAACATAAAGTATGGAGAGAGCTTCAGGACATTCACTCAGTCAAGGTGGAAAATGAAACAATCCAAGGAGGAGCATTACTTGACTTTCTCATGGTGTTTGATCAGGCCTCCAGAGAAAAACAGGTGCAATGAGAAGATCCTGTTTAACACGCTTTGCTGTTGTATTagccttatttatttaaattatgtggacatatttatttattttttattgcatgtacTCTACTACACCATAACACAAAAGAACTTAAAATCTAACTTATTCTCATCACAAGTGTGTTTGCATCAGTTACAGTGTACTGAAATTGTGAATGTTGGTTTTTAactgttgatttattttaaatactttgtgAGCTTCAAAGGCTGAAtggataattaaaataaaacaaacgttGCATTAA

Function

GO:

id name namespace
GO:0006955 immune response biological_process
GO:0050829 defense response to Gram-negative bacterium biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237599.1 True 902 mRNA 0.37 4 6723047 6724403

Neighbor

gene id symbol gene type direction distance location
ifng1 NA coding downstream 1898 6719218 ~ 6721149 (-)
si:ch211-266a5.12 LOC107725560,LOC107655565,LOC107587181 coding downstream 7319 6713287 ~ 6715728 (-)
grip1 grip1,LOC107655593,LOC107694275,LOC107757274 coding downstream 95166 6401767 ~ 6627881 (-)
tmbim4 tmbim4,LOC107757272,LOC107567270,LOC107587136,LOC107725641,LOC107694279,LOC107655596 coding downstream 329570 6389698 ~ 6393477 (-)
lemd3 lemd3,LOC107655547,LOC107694277,LOC107587170 coding downstream 352474 6362449 ~ 6370573 (-)
LOC122343434 NA coding upstream 2182 6726585 ~ 6727833 (-)
il26 NA coding upstream 7938 6732341 ~ 6734729 (-)
mdm1 LOC107577767,LOC107655590,LOC107725562,LOC107694231 coding upstream 16490 6740893 ~ 6750250 (-)
opn1sw1 opn1sw coding upstream 31609 6756012 ~ 6758188 (-)
irf5 LOC107577905,LOC107587141,LOC107725599,LOC107655585,LOC107694268,LOC107757280 coding upstream 51896 6776299 ~ 6784035 (-)
LOC122342911 NA non-coding downstream 333846 6377116 ~ 6389201 (-)
G26556 NA non-coding downstream 455633 6266832 ~ 6267414 (-)
G26541 NA non-coding downstream 488109 6186089 ~ 6234938 (-)
G26490 NA non-coding downstream 638837 6083590 ~ 6084210 (-)
G26487 NA non-coding downstream 645715 6077087 ~ 6077332 (-)
G26787 LOC107725579,LOC107655582 non-coding upstream 117571 6841974 ~ 6843849 (-)
G26790 LOC107725579,LOC107587145 non-coding upstream 121156 6845559 ~ 6908495 (-)
G26795 cntn1b,cntn1,LOC107581848,LOC107757284,LOC107694230,LOC107725506 non-coding upstream 135671 6860074 ~ 6862247 (-)
G26796 NA non-coding upstream 138320 6862723 ~ 6863382 (-)
G26799 NA non-coding upstream 159498 6883901 ~ 6956375 (-)
msrb3 msrb3,LOC107725596,LOC107587134,LOC107757268,LOC107561995 other downstream 361563 6350491 ~ 6361484 (-)
arhgef39 arhgef39,LOC107725686,LOC107655603,LOC107757260,LOC107694288 other downstream 470399 6085892 ~ 6252648 (-)
mrps33 mrps33,LOC107694294,LOC107597883,LOC107725593,LOC107600452,LOC107655561 other downstream 783032 5938055 ~ 5940015 (-)
G26462 NA other downstream 809509 5906755 ~ 5913538 (-)
G26414 LOC107560737,LOC107690649,LOC107757234,LOC107589816,LOC107694311 other downstream 869681 5850404 ~ 5853366 (-)
il22 NA other upstream 13238 6737641 ~ 6740741 (-)
si:dkey-261e22.4 NA other upstream 489931 7214334 ~ 7220911 (-)
G26951 NA other upstream 830712 7555115 ~ 7558453 (-)
LOC122343432 NA other upstream 1523508 8247911 ~ 8249927 (-)
G27232 LOC107589947,LOC107725677,LOC107659846,LOC107586091,LOC107694692 other upstream 1736103 8460506 ~ 8468028 (-)

Expression


Co-expression Network