guca1a (guca1a,LOC107590762,LOC107755893,LOC107590961)


Basic Information

Item Value
gene id guca1a
gene name guca1a,LOC107590762,LOC107755893,LOC107590961
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 11602201 ~ 11606571 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237649.1
cacacacacacacacacacacacacacacacacagtgagctGGATTAGTCTCAGTTAATATCAATAAGATGAAGCTGGCGAGGCGTGTCTGATCCCAGGCCAGTACAAAAGCCTCCCGAGGGTGCCCACCTCTCTCTTAGGTCCCAGAGTCGTGCGTCTGTGAGAAGCGAAAACGCTCGCCTGCACAGCAGACCGGTTGGGCTTTCCTGACAGATTTAGCTCACGCCCAAACAGGCGGCTCTCAGCTCGGCGATGGGGAATTCAACGGGGTGCACCGTGGACGACCTGCAGGCTGTGGAAATGCACCTGTGGTATAAGAAGTTCATGACCGAGTGTCCATCCGGTCAGCTCACGCTGCACGAGTTCAAGCAGTTCTTCGGGCTGAGAGGTCTGGACCCAGAGGCCAACGCTTACATCGAGCAGATGTTTCGCACTTTTGACATGAACAAGGATGGTTACATAGACTTCATGGAGTATGTGGCCGCTCTCAGTCTTGTAATGAGAGGCAAGATGGAGCACAAACTGCGCTGGTATTTCAGGCTTTACGACGTTGACGGCAATGGCTGCATAGACCGACACGAGCTCCTCAATATCATCAAGGCCATCCGCGCCATCAATGGAAGCGAGTCGCAGGAATTGAGTGCCGAGGAGTTCACAAACCGAGTGTTCGATAGGATCGACATCAACGGAGACGGGGAGCTGTCACTCGAGGAGTTCGTAGCGGGGGCCCGGAGCGACGAGGAATTTATGGAGGTCATGATAAAGAGCTTAGACCTTTCGCACATCGTGGCGATGATCCACAACCGGAGACACAGCGTCTGAGAGACAGCCCGCATGCGGTTCTCCCTAGGAGTCTCAGCTAATTCTGAAAGCACTTTAAAGCACAAACAGTCACTTCAAACCGAGATAAAGGGGCCAAGAAATTAAACTGGTGTGGGACGTCCCGCATCTAATAAACTGACTGTTTCCCAAAAACGGCCTTCTCTCGCTCAGCAGAAAGAGGCTTCACGGGAAAAGAATCAGAATGATGTGGATGTCCGTTtatagagttttattttttgttactttattattaacagcaaaaaaaaaagatgtaacatttctttttatgtacATTCATCATTTGTATTAGACGCCTCAGAGAAACACATTCCTAAATCTTTGACTGATAAGTGTGTAACAAATACGTTTGATCAAAATTTTGGGGCCCTCAAGGCTACATAAAAACAAGTGATATTGTAAAACAATTGCAATTCAAAACAatgggtttttttgtcttttacatttttatattttaaaatatggtttattgtcaaatctgaatatttagggttagctgattttttttggtaCTATAAAATGGTCAACTTTTAATAAttccatctttttttaaacagcattttaaaacgtGTCTCAGTTAATATAAGGTTAATCAACCAACCTCATATTAATTGAATTTCATTTAATACACACTTGTTAAAACGGTCTTCAGTTATATTCCACTGCATgtcttcttatatatatatatatatatatatatatatatatatcatatactgtatttactaaTATTGCATATTATCTTATACCTTTGCAGTGTTTAAGAACGAAACTGGCTTGTTCTGCATTCGCATAGACATGTTATAAGGGTGCCTTCTGTTGTAGGACCACAGGGCCTACTTTAAGCTTGTTAATGAACTGCTTGTGCTTCCCTTcggacattaaaaacaaaaacaactgacGCTGTCGTGAGTCCATGCATGCATCAACATACGGCAGACACCCAAACGACCCTTTGCCCTGAGCCTCCACCCTCCATTCAAACTCCGTCAGCGcgcgagaaaacacacgagtcACATTCGGAGCCTTTTTAGCCGCGGTCCCTCAGTTTCCATGACAACCGCAATCTATTACCATGGAGACCTTGTGAGTCAGACGCAGCGACAGTAACCTCAGAAAAGCCGAATTAACAGACGGCGATACTAAAAGCCTAAAATTTCAATTAATC

Function

symbol description
guca1a Enables calcium ion binding activity and calcium sensitive guanylate cyclase activator activity. Is expressed in eye and retina. Human ortholog(s) of this gene implicated in cone-rod dystrophy 14. Orthologous to human GUCA1A (guanylate cyclase activator 1A).

NR:

description
PREDICTED: guanylyl cyclase-activating protein 1-like

GO:

id name namespace
GO:0031284 positive regulation of guanylate cyclase activity biological_process
GO:0005509 calcium ion binding molecular_function
GO:0008048 calcium sensitive guanylate cyclase activator activity molecular_function

KEGG:

id description
K08328 GUCA1; guanylate cyclase activator 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237649.1 True 2008 mRNA 0.44 4 11602201 11606571

Neighbor

gene id symbol gene type direction distance location
llph llph,LOC107755886,LOC107590743,LOC107694185,LOC107680014 coding upstream 26964 11573747 ~ 11575237 (+)
myf6 LOC107755889,LOC107749082,LOC107694156,LOC107680015 coding upstream 275508 11324633 ~ 11326693 (+)
syt1a syt1a,LOC107560302,LOC107694178,LOC107734425,LOC107755909,LOC107590640,LOC107680026 coding upstream 445457 10998929 ~ 11156744 (+)
nav3 nav3,LOC107755908,LOC107680031 coding upstream 619387 10857085 ~ 10982814 (+)
LOC122342682 NA coding upstream 875936 10722325 ~ 10726265 (+)
lhfpl3 lhfpl3,LOC107680022,LOC107694191 coding downstream 11490 11618061 ~ 11652758 (+)
sema3c sema3c,LOC107694195,LOC107680038,LOC107710663,LOC107755880 coding downstream 134161 11740732 ~ 11783807 (+)
slc35e3 slc35e3,LOC107710682,LOC107737854 coding downstream 408015 12014586 ~ 12018965 (+)
mdm2 mdm2,LOC107590969,LOC107710681,LOC107692244,LOC107737846,LOC107694202 coding downstream 414050 12020621 ~ 12027468 (+)
LOC122342854 trhde,si:ch211-198g19.1,LOC107556776,LOC107666938,LOC107590972,LOC107710683,LOC107710667,LOC107669707,LOC107737852 coding downstream 467132 12073703 ~ 12147286 (+)
G27827 NA non-coding upstream 166 11599745 ~ 11602035 (+)
G27826 NA non-coding upstream 3886 11597872 ~ 11598315 (+)
G27825 NA non-coding upstream 4498 11597295 ~ 11597703 (+)
G27805 LOC107590700,LOC107590977,LOC107694182,LOC107755902 non-coding upstream 157485 11443224 ~ 11444716 (+)
G27801 NA non-coding upstream 167870 11429962 ~ 11434331 (+)
G27836 kmt2e,LOC107590817,LOC107710662 non-coding downstream 46901 11653472 ~ 11654957 (+)
LOC122343275 NA non-coding downstream 67429 11674000 ~ 11678670 (+)
G27850 NA non-coding downstream 78312 11684883 ~ 11685136 (+)
G27851 NA non-coding downstream 79142 11685713 ~ 11688940 (+)
G27862 NA non-coding downstream 146097 11752668 ~ 11785852 (+)
acss3 acss3,LOC107694183,LOC107755903,LOC107680029,LOC107749070,LOC107560301,LOC107590709 other upstream 185974 11386130 ~ 11416227 (+)
myf5 LOC107560306,LOC107680018,LOC107749081 other upstream 267745 11331545 ~ 11334456 (+)
LOC122342850 LOC107740709 other upstream 893254 10707132 ~ 10708947 (+)
zmp:0000000650 LOC107694155,LOC107589077,LOC107732968,LOC107680013,LOC107574990 other upstream 899998 10686097 ~ 10702203 (+)
rassf8b rassf8,rassf8b,LOC107590609,LOC107589039,LOC107738830 other upstream 927091 10662231 ~ 10675110 (+)
ndufb2 ndufb2,LOC107755897,LOC107578274,LOC107694192,LOC107590801,LOC107710676 other downstream 82743 11689314 ~ 11691129 (+)
gnai1 gnai1,LOC107590838,LOC100706147,LOC103382723,LOC106609493 other downstream 190411 11796982 ~ 11815305 (+)
kin kin,LOC102791470 other downstream 1544165 13150736 ~ 13154358 (+)
G28252 si:dkey-183c16.7,LOC107689220,LOC107755152 other downstream 1699098 13305669 ~ 13315684 (+)
G28249 LOC107689220,LOC107755152 other downstream 1716717 13323288 ~ 13530631 (+)

Expression


Co-expression Network