LOC122343283


Basic Information

Item Value
gene id LOC122343283
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 3017632 ~ 3018211 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237663.1
TTTCTGATAGCACTGGCTTTATAAAGGGGCAGAGGATCAGGAATTATTTATACAGACTCTAATACTACAGTGCGTCATGGCGGTGTCCGGTCATCTCGGGTTGGCGTCTCTGGTCGTGTTGATGCTGGCGTCTCAGCTGGACTTTTCCAGCGCCGCCGTGCTCGTGTATGACTTGCACGCCAACAACCTGTCCGGTGATGCTGCTGGAAACAAACCCGATCCGTACCTCAAGATCTGGTGTGGTGGCTCTTTCGAGGATACAAATTACATCAAAGATAATTCTAATCCTCAGTGGACAGAGAGCTTCACCTTCTCAAGCTGTGATTCCGGCGACAAACTGAAGATGGAGGTGTGGGACAAAGACACGACGTCTGACGATCACTTGGGCTGGTACAGTGGACCGGTGGGAATCGGAAACAACaatcacatttctttttctgttggACAAGGCACTATGTATTTAAGCTACGATGTGAAATAAATCTGCTCCAAACACGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237663.1 True 499 mRNA 0.48 2 3017632 3018211

Neighbor

gene id symbol gene type direction distance location
si:ch211-240l19.8 LOC107658767,LOC107725963 coding downstream 4273 3012766 ~ 3013359 (-)
nudt5 nudt5,LOC107658859,LOC107656337,LOC107726016,LOC107743836 coding downstream 79615 2935107 ~ 2938017 (-)
mcm10 mcm10,LOC107658860,LOC107726070,LOC107743741,LOC107656326 coding downstream 82656 2927805 ~ 2934976 (-)
cdk17 cdk17,LOC107658862,LOC107656329 coding downstream 113343 2863140 ~ 2904289 (-)
lta4h lta4h,LOC107658863,LOC107656327,LOC107744078 coding downstream 172627 2835848 ~ 2845005 (-)
LOC122343240 NA coding upstream 6037 3024248 ~ 3024825 (-)
wnk1b wnk1,LOC107725976,LOC107658853 coding upstream 8860 3027071 ~ 3094405 (-)
LOC122342759 fbxl14b,fbxl14,LOC107580311,LOC107656333,LOC108279751 coding upstream 336158 3354369 ~ 3356141 (-)
LOC122342755 LOC107676321,LOC107716109,LOC107709941,LOC107655767 coding upstream 382169 3400380 ~ 3402341 (-)
LOC122342398 LOC107584038,LOC107725905,LOC107658738 coding upstream 500478 3518689 ~ 3520928 (-)
G25625 NA non-coding downstream 21174 2980159 ~ 2996458 (-)
LOC122343423 NA non-coding downstream 479626 2534205 ~ 2538006 (-)
LOC122343417 NA non-coding downstream 728513 2203585 ~ 2289119 (-)
G25362 NA non-coding downstream 733854 2283285 ~ 2283778 (-)
LOC122343454 NA non-coding downstream 834963 2167305 ~ 2182669 (-)
LOC122342459 NA non-coding upstream 98193 3116404 ~ 3117297 (-)
LOC122342458 NA non-coding upstream 99268 3117479 ~ 3119550 (-)
G25673 wnt5b,LOC107656325,LOC103026771,LOC107580320,LOC107744029,LOC107726030 non-coding upstream 362447 3380658 ~ 3676399 (-)
LOC122342758 NA non-coding upstream 384613 3402824 ~ 3403502 (-)
LOC122342757 NA non-coding upstream 398376 3416587 ~ 3417917 (-)
ccdc3a ccdc3,ccdc3a,LOC107725961,LOC107658768,LOC107580337,LOC107744050 other downstream 5418 2999882 ~ 3012214 (-)
LOC122342907 NA other downstream 544564 2472284 ~ 2473068 (-)
dock4b dock4b,LOC107656358,LOC108425388 other downstream 641916 2299635 ~ 2375716 (-)
tnni4a zgc:101560,LOC107725970,LOC107584059,LOC107658770,LOC107656258,LOC107581287 other downstream 919831 2091351 ~ 2097801 (-)
cald1a cald1a,LOC107583995,LOC107725991,LOC107658884,LOC107656362,LOC107710121 other downstream 929053 2042953 ~ 2088579 (-)
LOC122342805 NA other upstream 881 3019092 ~ 3021512 (-)
LOC122342819 foxp2,foxp4,LOC107725896,LOC107728618,LOC107656011,LOC107675840 other upstream 516451 3534662 ~ 3577123 (-)
LOC122342822 tmem9b,LOC107674442,LOC107750540,LOC107754675,LOC107585953,LOC107700603,LOC107593285 other upstream 582789 3601000 ~ 3601991 (-)
LOC122342823 scube2,LOC107750541,LOC107585952,LOC107674429,LOC107593229,LOC107700597 other upstream 584145 3602356 ~ 3618367 (-)
shank3b shank3b,LOC107725995,LOC107592218,LOC107656300,LOC107580703,LOC107743477 other upstream 1115766 4133977 ~ 4161828 (-)

Expression


Co-expression Network