ppp2r5ea (ppp2r5ea,LOC107701493,LOC107707079,LOC107563687,LOC107697307,LOC107743972,LOC108434994,LOC108257929,LOC103032801)


Basic Information

Item Value
gene id ppp2r5ea
gene name ppp2r5ea,LOC107701493,LOC107707079,LOC107563687,LOC107697307,LOC107743972,LOC108434994,LOC108257929,LOC103032801
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 16840705 ~ 16851156 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237664.1
GTTTACCGGTCTGTTTTGAGCCAGGAAAAAATTGGCACAGAGCACTAGCACAGCCTGCTAACATATACTTGTGATAACAGGTTAGCAATTAGTCGCCGTTTGAGTGAGTTTAGCAGTAAGGAGAAGGCCGTTCTTACCTTAGTGACCAACACCTGGGTATGTAGTCGGTCAGTGTATGTGTATGAATGTGGCTTTTGGTGCAGGCTGGGACGGCAGCTACAGGGATTAGCTGTACGGGGAGCTCCTGCTAGCAGTGCAATGCTGACATACCTTCAGACGGCTTGCTAATTATCTCATAAACGGGGATTTTGCTGCGACTCTAGTCGGAAAATCGTCACCATTCATAAGCGGACTGTATTCTGAAGCCCGGACCGGTTTAAATAGTCCGACAGTGAAGCGTTCGAGTTAGCTGGCTAGCTGGGTCGCCTTCAAGTACAAGGTTAGCTGCTTAAAACGAGCCACCTGGACCCGAGAACCATCAAAAGAGGGCTATGTCTTCAGCAGCCACCACAGCCCCGTCGGTGGACAAGGTGGACGGCTTCTCCAGGAAGTCTGTCAGGAAAGCCAGGCAGAAGCGAGCGCAGAGCTCATCCCAGTTCAGATCTCAGGACAAGCCCATAGAGCTGGTGCAGCTGCCTCTGCTGAAAGaTGTTTCTGCACAGGAGCAACCAGAGCTATTCCTCAAGAAACTGCAGCAGTGCTGTACTCTTTTTGACTTCATGGACACACTGTCTGACCTCAAGATGAAAGAGTATAAGCGGTCCACCCTCAATGAGCTGGTGGACTACGTCACCCTCAGCCGGGGCTACCTGACTGAGCAGACCTACCCGGAGGTGGTCAAAATGgtGTCCTGTAATATTTTTCGGACTCTTCCGCCTAGTGACAGTAATGAGTTTGACCCAGAAGAAGACGAGCCCACGCTGGAGGCCTCTTGGCCGCACTTACAGCTCGTTTATGAGTTCTTCATTCGCTTCTTGGAAAGTCAAGAATTTCAGCCCAGTGTTGCCAAAAAATACATCGACCAGAAATTTGTATTACAGCTCTTGGAGCTGTTTGATAGCGAGGACCCACGAGAAAGGGACTGTCTGAAAACAGTTCTGCACAGAATCTACGGAAAGTTCCTCGGCCTCAGGGCTTTCATCCGCAAACAAAtcaacaacatttttctttgTTTTGTATATGAGACAGAGCGCTTCAATGGCGTAGCTGAACTGCTGGAGATTTTGGGAAGCATCATCAATGGTTTTGCGCTTCCTCTCAAAGCTGAGCACAAACAGTTCCTGGTGAAAGTGCTGCTGCCTCTGCACACAGTGAGGAGCTTGTCTCTCTTCCATGCCCAGCTGGCCTATTGTATTGTACAGTTCCTAGAGAAAGACCCCACGTTAACAGAACCTgttatCAGAGgcttgttgaaattttggccgAAAACATGCAGTCAAAAAGAGgTTATGTTTCTTGGAGAGTTGGAGGAGATTCTAGATGTGATTGAGCCCACTCAGTTTGTTAAGATCCAAGAGCTGCTCTTCAAACAGATTGCTAGATGTGTGTCCAGCCCCCATTTTCAGGTGGCAGAACGAGCCTTGTACTACTGGAACAATGAGTATATCATGAGTCTGATTGAGGAGAACTCTAGTGTCATCTTGCCTATCATGTTTGCCAGTCTCTACAGGATCTCCAAAGAGCACTGGAACCCGGCAATATCAGCTTTGATCTACAATGTGCTCAAAGCATTCATGGAGATGAACAGCGCCTTGTTTGACGAACTCGCCGCCAATTACAAATCAGACAGGCAGAGGGAAAGGAAGAAGGACAAAGAGCGAGAGGACCTATGGAGGAAGCTGGAGGAGCTGGAGCTCAGAAGGGGCATCCAGAACAGCGACGGAGTCATTCCCACCTAACACGGACCTCGTCTCCGCCCTTCTGTGTGGCCCCAACCAATCCCTTTTTACTCTGCCACAGGGACCCCGTCCCCCTATTTGCTTCTCATGCTGCGTACTTTACCGCACACTCCCTCGTTCATTTCCTCCCTTTCAACAGCACTGTAAATAATCCTCTCCCTCTTTCCTGTATCATACTACTACActgaaaggaagaagaaaaaaacagaaaatctgaAGAGAGACTTAATGTGCACTccttgttgtaaaaaaaaaaaaaaaaaaaaaaaaagaaaatggtaaaATGATAATCAACTATGGTCAaaggatatattttaaaaaatcttttcagtTCAGAAATTGTTCAGCGTCTCCATGTCAGTATGTTGTTCTCAAGGAAGTGCCCCGGGACTTTGGGATCCGTGCTCACCCTGCGATTAAAGATGtcttatgtgaggatcctgtcgccaccacttttttttttttttgtccttttatgAAGAGAGACTTTCCA

Function

symbol description
ppp2r5ea Predicted to enable protein phosphatase activator activity. Predicted to be involved in protein dephosphorylation. Predicted to act upstream of or within signal transduction. Predicted to be part of protein phosphatase type 2A complex. Predicted to be active in cytosol and nucleus. Is expressed in female organism. Orthologous to human PPP2R5E (protein phosphatase 2 regulatory subunit B'epsilon).

NR:

description
PREDICTED: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform-like

GO:

id name namespace
GO:0050790 regulation of catalytic activity biological_process
GO:0007165 signal transduction biological_process
GO:0000159 protein phosphatase type 2A complex cellular_component

KEGG:

id description
K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237664.1 True 2391 mRNA 0.47 14 16840705 16851156

Neighbor

gene id symbol gene type direction distance location
kcnh5a kcnh5a,LOC107743971,LOC107697309,LOC107563685,LOC107701494,LOC107707078,LOC108434995 coding downstream 19235 16748716 ~ 16821470 (-)
LOC122343211 ptk2bb,LOC107589060,LOC107697310,LOC107701495,LOC107563684,LOC107707077 coding downstream 115911 16710524 ~ 16724794 (-)
LOC122342599 LOC107749047 coding downstream 247611 16573127 ~ 16593094 (-)
LOC122342596 NA coding downstream 297803 16537980 ~ 16542902 (-)
LOC122342885 LOC107749047,LOC107728228,LOC107671223 coding downstream 341866 16484567 ~ 16498839 (-)
sgpp1a si:ch211-212g7.6,LOC107697306,LOC107589063,LOC107743975,LOC107716492,LOC107701492,LOC107563688 coding upstream 1843 16852999 ~ 16864423 (-)
snapc1a LOC107743976,LOC107697295,LOC107589064 coding upstream 13349 16864505 ~ 16867985 (-)
hif1ab hif1a,LOC107589062,LOC107743977,LOC107563689 coding upstream 17305 16868461 ~ 16881395 (-)
six6b six6b,six6,LOC107589092,LOC107743981,LOC107697293,LOC107701490,LOC103035477,LOC108257662 coding upstream 104364 16955520 ~ 16958074 (-)
ppm1ab ppm1ab,LOC107718411,LOC107697300,LOC107701489,LOC107589071,LOC107560378,LOC107743982 coding upstream 136152 16987308 ~ 16993364 (-)
G29021 NA non-coding downstream 139034 16701068 ~ 16701671 (-)
G29012 NA non-coding downstream 230706 16609636 ~ 16609999 (-)
LOC122342602 NA non-coding downstream 289701 16550333 ~ 16551004 (-)
LOC122342601 NA non-coding downstream 295084 16544954 ~ 16545621 (-)
G28970 NA non-coding downstream 376026 16464445 ~ 16464679 (-)
LOC122342882 NA non-coding upstream 57053 16908209 ~ 16924965 (-)
G29127 NA non-coding upstream 104299 16955455 ~ 17026339 (-)
G29143 NA non-coding upstream 187671 17038827 ~ 17040834 (-)
G29179 NA non-coding upstream 367995 17219151 ~ 17219453 (-)
G29212 NA non-coding upstream 498133 17349289 ~ 17349506 (-)
G29022 chrna2b,LOC107697311,LOC107589091,LOC107723144,LOC107746381,LOC107563692,LOC107701496 other downstream 131745 16707774 ~ 16708960 (-)
G28898 NA other downstream 907841 15932494 ~ 15932864 (-)
kiaa0930 zgc:172139,kiaa0930,LOC107601010,LOC107719873,LOC107687566,LOC107699202 other downstream 1229130 15601440 ~ 15611575 (-)
LOC122342864 rpl34,LOC107566275,LOC107573163,LOC107681344 other downstream 1813042 15024587 ~ 15027663 (-)
LOC122342642 pfkfb3 other downstream 2029994 14808543 ~ 14810711 (-)
prkchb prkchb,LOC107743988,LOC107697294,LOC107701491,LOC107718442,LOC107589067,LOC107563690 other upstream 34997 16886153 ~ 16900295 (-)
G29135 NA other upstream 155771 17006927 ~ 17017823 (-)
xrcc3 xrcc3,LOC107755221,LOC107683971,LOC107560377 other upstream 267187 17118343 ~ 17122129 (-)
srd5a3 srd5a3,LOC107755245,LOC107683999,LOC107665336,LOC107601910 other upstream 785867 17637023 ~ 17638742 (-)
LOC122342228 scgn,LOC107693759,LOC107757885,LOC107669120,LOC107714763,LOC107747999,LOC107663245 other upstream 883450 17734606 ~ 17744543 (-)

Expression


Co-expression Network