wipf2b (wipf2b,LOC107752530,LOC107549849,LOC107562512,LOC107665117)


Basic Information

Item Value
gene id wipf2b
gene name wipf2b,LOC107752530,LOC107549849,LOC107562512,LOC107665117
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 27969910 ~ 27977175 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237704.1
AGAGGGTGGGGGGGCGCAAATCAAGGCGATTGACGCGCGCGCGACCATGTATGAGGGGAGCCCGGTTTGCGAAAACATCGGACGCTGCGGGAAAAAAGTAGGCACAAACGTCGTCTTACTTCGTCGCGTAAACGCGTTCTGCCAGGTTTGACCGCCGGAACGTTTTTCTTCACGCACCGTCGGCCGGTACGGCGGGAAACGTCTCGACGTGATGGACGCACCTGCCAAGCGCGAGGCCAAGCTAAGCTAAGGCTAAAGTCGAGCTCATTCACTACCAAATAAATGTGCTTAGTTAAATACGGGACTTGCGTTTCGATGTCTTTTGgTCTTCATGAAGTTTTAATTGTCTCACACACTCAGCTGTAAACACCAGACGGAGATCCAAGATGCCCATTCCTCCCCCTCCCCTCCACCCCAGGTGGACCCCTCCTCCCCCACCCTTAGCCAGGTAGGCGAACACCACCCCTCCCAAGCTGAGCCGGGATGAAGCGAAGGGCAGGGGGGCGTTGCTCACTGATATCTGCAAAGGGGCCAAGCTGAAGAAAGTTGGCGTTGTCAATGACAGGAGTGCACCTTTGATAGAGAaacCCAAAGGAAGTGGCGGAGGTGGGTCCGGCAGTGGAGGGCCTTCTGCGCCGGTCCAGCCAGTGGGGGGGCTGTTTCAGGGTGGCGTCCCAAAATTGCGACCTGTAGGAGATGGTTCCACAGGCAGGTCTGGTCTGCACCCTCCTGGGACTCGCTCTGCTGCACCTCGCCCACCTGGCGGCCACGAGGACCCCGACAGTGCGTCTCAGCAGGCCTCTCCTCCAGAGTCTGGCCGTTCCCAGAGACCGTCCCTGCCTGATCTCTCCCGTTCCCCCGGTGGAGGCAGCAGCCCGTCTACCGGCATGAAGCACAGCTCTTCTGCCCCGCCTCCGCCGCCCCCCATGTCTCGGCGTGGAAACGCTCCCCCTGCCCCGCCACAGAAAGCGACGGCGCCCTTGTACAACCGCGAAAAGCCACTTCCGCCGACTCCAGGGCAGCGAGGACCCTCTCCAGCGCCGGTGCGTGAAAATGCACCACCCCCACCAGTGAAACCTCCTCCATCACCTGCAAGCAGCCGCtcgtcttcatcctcctcttcctccctggcCCCACCGCCGCCCCCTTACCGCCAGCAGTCTGGGCTTTCCAATGGCCCCTCCAGTCCTGTGAACGAAGCAGCCCCTGAACTGCCCCAGAGACACAACTCACTCAGCAAGAAGCCTTCGGCAGGTGGACACACACCGACGCGCGGACATGCGCCACCTCCACCACCATCACCCACCCCACAGGCCACCAGACCccctcctccagcacgagatccCCCGGGACGAGGAGCAGCTCCTCCGGTTCCTGGGCAGCCATCACGAAACGGCCGGGACGCTCCTCCGCCGCCTCCACCTCCTTACCGGACTCATGGCACTCCCTCGGATGTCCCGAGCCGAGGCAAGCCCCCTCCTCCCCCCCGCACACCAGCCGGACCCCGCCCCTCCCCGCCTATCCGCAATGGACACACTTCCATTTCCCGTTCCTTTGTAGATGATTTTGAGTCCAAGTATTCTTTTCATCCTCTGGATGACTTCCCTCCTCCAGAAGAGTATAGACACTTCACTAAGATATACCCAAGCAAAGCTAACAGAGCAGTAATGCGAGGAGCCCCTCCTCTGCCGCCCGTTGGGAGGTAAACACTGTGACCGGTCGCTCGGGGCTGCATCGGCGACGAGGGTTCTTCACACAGACCCATACGCTCATCAACAGACAATCTCACACGCACATCTAAAGACACAAAGCCTGCACCTTATTAACAGCCATTTCCTCATCGGATAACATTCCTCTACGTACAAGCAAGCTCCATCGTATCACTTTCGTCCGGTGCGGAAGGTCGCCTTCGCTCAGAAAAGAGTGAGATGAAGGAAAGTACTGCATTCCACCGTCAATAACGGCCAACTTAATATCGTTTTCCTCTTGTATCTAGGTAGCATCGCGCATTTGATTGGATGTGCACTGAGAGCTAGAAGTGGCCGTCAGAGCCTGTATGTAGGCGGAGCATAGCACTTGAAACGGGAAGCGGAGAGCATGTCCCTGGAAAATGTCTTAACTTCTACGTCAGGCAACGCGTTCGATGTTTTGTTGGCGGTTTTTCCTCTCATTCGCGACCCCGTGTCATGCACTGTGAATAATCACTCGGAGCAGGCGGCGTCTGAGTGTGAGCCGAACTGTAAAAACTGTTAGCTTTAGATGTTTTGGTCTTTTTGTCCTGGTCGTGCCCCTTTCAGGGAACAGCCATTATCTTTAAGTTCTCTCAGGGGCTTTGTTGGACTTCATTACCCTCCGGTAAGTTTGTGAACGAAAGGTCCAAAAGTGCCAACAGATGCTCTGCCATTAATAAATCAGCATGGCTCCTTCAGTCGTAACGCATCTTCCTTTGGGAAACCGGTAGGTTGATTGCCTTCTATCGTTTGTTCTAAAGACGGACCATGGgattttaaaacgttttttttttttcaagtttggAGTCGTCGTCCTGCAATAATCCTCGCACTTTGTGCCGCATTGTGAGTCTTGGCTTTTGTCATTTTCCCGTTGCAGAACGGCACGGCTATGCTGCTTGCGTTATCGTTTGAAAGCAGGCCTTGTCCACATGCTGCCTACGGAGCGGTTTTGTAGAGCGGCGGTTGTGTCAAAGACAGCCTTTGACGGTGTGTGAACTTGATCTAGGACTTTCGTCGCTTCGCGGAACTCAAGTTCAGtgcatgctgctttttttgAGACAGACCTCCAATATAAACGTTGGGTAAATTTGCATGTAAAAACGCAAagttttacttcattttcttcagttttttcaTCCGGTCTTTGGATGACAAGATCGTAATCAAGCGTTCTGGAACGGTTGTCTTATACTATATAGTATTGCTGCAGAAATGTGGTACCTAGTCATTTCATTACCGCTCATGTTCAACTAAGTTTCAGCCTGCTGATAACCACATCCCAGTTTATCCACAGCTTGTTAGATCTTCCCGTTTATACGTTCAGGTTTGTTCTTCAGAGAATAGACTGCATTGCAGATCTACAGAAGAGCTAACTGTTCATAAATGGAGTATAGATTAGATGGACAGTAGTAAACTCGCTCCCACCCTCTTTGTTGTTCTGCCTTACTGATTGTGTCGGTACgggatttgtaaaaaaataaaaaaaaaaaggaaagaaatagTGTATTTACGAGTACATAGAAAGATATAGTAGTGATAGttattaatctatttttaagTTGTAAAAAGCTtgtaatatagtaaataatttgAGGCAAACATAGGATTCGAATGAATTCTCGGACTAATCGTTACTGGATAGAATGTCCTCTCACATGAATACGGCTGAGGAGGTTTTCTTAGACTAATACTTGTCTTTCTTCGCCTGCTGTCCGCCGGCAGGTGTCAGTGAACATGTCTTTAGAGGAGCATAACTTACTCACATTGAGAGTAGACGACTGTCATTGTCACCATTCCATGCTTAACTAAAGCTTATCCACACCTGTTGAAATAAAGCTGAGGAAAAAACATG

Function

symbol description
wipf2b Predicted to enable actin binding activity. Predicted to be involved in actin filament-based movement. Predicted to be active in actin filament. Orthologous to human WIPF2 (WAS/WASL interacting protein family member 2).

NR:

description
PREDICTED: WAS/WASL-interacting protein family member 2-like

GO:

id name namespace
GO:0003779 actin binding molecular_function

KEGG:

id description
K19475 WIPF; WAS/WASL-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237704.1 True 3585 mRNA 0.52 9 27969910 27977175

Neighbor

gene id symbol gene type direction distance location
LOC122343310 LOC107752528,LOC107549854 coding downstream 141 27966309 ~ 27969769 (-)
pdk2b pdk2b,LOC107665156,LOC107752527,LOC107549851,LOC107753849,LOC107562510,LOC107666345 coding downstream 17913 27946996 ~ 27951997 (-)
flot1a flot1a,LOC107665160,LOC107549850,LOC107752515,LOC107666343,LOC103027319,LOC108433738 coding downstream 554260 27409088 ~ 27415650 (-)
LOC122342367 NA coding downstream 1100762 26865773 ~ 26869148 (-)
trnas-uga_106 NA coding downstream 1242516 26727313 ~ 26727394 (-)
jupb jupb,LOC107562513,LOC107752531,LOC107549862,LOC107665165,LOC105013272,LOC108438403 coding upstream 3895 27981070 ~ 28037700 (-)
LOC122342469 si:dkeyp-113d7.1,LOC107727714,LOC107549870,LOC107563030,LOC107665141,LOC103032369 coding upstream 136327 28113502 ~ 28118332 (-)
LOC122342473 znf362b,LOC107593390,LOC107737708,LOC107565834,LOC107699608,LOC107712695,LOC107671956,LOC108434701 coding upstream 194076 28171251 ~ 28177586 (-)
LOC122343218 omp,ompa,LOC107735103 coding upstream 235071 28212246 ~ 28213047 (-)
pkma pkma,LOC107712845,LOC107665073,LOC107595343,LOC107668482 coding upstream 391280 28368455 ~ 28382557 (-)
G31728 NA non-coding downstream 27106 27941679 ~ 27942804 (-)
G31723 NA non-coding downstream 46734 27920620 ~ 27923176 (-)
G31718 LOC107549838,LOC107752523,LOC107554337,LOC107754066,LOC107666346,LOC107665176 non-coding downstream 65227 27898767 ~ 27904683 (-)
G31692 NA non-coding downstream 149657 27820024 ~ 27820253 (-)
G31517 NA non-coding downstream 323485 27645026 ~ 27646425 (-)
G31736 NA non-coding upstream 103000 28080175 ~ 28080381 (-)
G31737 NA non-coding upstream 118719 28095894 ~ 28096491 (-)
LOC122342474 NA non-coding upstream 150039 28127214 ~ 28129808 (-)
G31759 NA non-coding upstream 249239 28226414 ~ 28228301 (-)
G31765 NA non-coding upstream 267815 28244990 ~ 28250107 (-)
G31508 LOC106519560,LOC107665151,LOC102211354,LOC101487824,LOC102313318,LOC102779181 other downstream 325178 27642692 ~ 27644732 (-)
G31503 pvrl2l,LOC107549846,LOC107665153,LOC107554349,LOC107752518,LOC107753776,LOC107666334 other downstream 353969 27539355 ~ 27615941 (-)
LOC122342454 kifc1,LOC107665178,LOC107753731,LOC107666336,LOC107549825,LOC107554333 other downstream 580512 27383753 ~ 27389398 (-)
G31467 zbtb22b,LOC107752533,LOC107665126,LOC107666316,LOC107549842,LOC107554346,LOC107753716 other downstream 587083 27379059 ~ 27382827 (-)
G31463 LOC107665166,LOC107752513,LOC107549841 other downstream 602261 27366412 ~ 27367649 (-)
eif1 eif1b,LOC107549864,LOC103043673,LOC107666344,LOC107665169 other upstream 88122 28065297 ~ 28067762 (-)
LOC122342471 si:dkeyp-113d7.10,LOC107753946,LOC107666338,LOC107563029,LOC107727707,LOC107549831 other upstream 143072 28120247 ~ 28130380 (-)
LOC122342472 znf384l,LOC107665159,LOC107752514 other upstream 204391 28181566 ~ 28187257 (-)
G31776 LOC107712874 other upstream 386850 28364025 ~ 28365196 (-)
G31868 NA other upstream 867018 28844193 ~ 28846421 (-)

Expression


Co-expression Network