LOC122343316


Basic Information

Item Value
gene id LOC122343316
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 13683225 ~ 13687640 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237707.1
tatttttttattccctaAATATACCCTTCACAAACATTACTGAAATTACATTAACCCAAAGATTGTCTCAAAAGTACAAGGGTTTTGAATACTGTACATATGCCcctaaacacaaacattatcttgttttcttttttctccccGTTAGTTATTAAGAAACGGATGCTTTCTAACACATGGTGGCAGTATGTtccaaaaattatataaaataaatatgtggtACATATGTTATCGAATGTGCGTagagtaaatgcatttaattggtttaataatatgtaatatagtttaaatatgCTTCTAAAAAACTATTAGTCTACAGTTTATAGTCCTTAGCATCATGATTTTAGACAATAGTGTGTGTTATGTTTGCAAGCTTTTGCTTGTCACCTATACTGTAGACTAACCGCATTATTTGTAATAAGGCCAAAATAATCGTCAAACTCATACATAGCATCTAATTTTTGGTTGGAACAATCTAAGTAACATTTATTACGTTAGTTCCCCACCTTTTCCATTCTGCTACAACACAGGATGATTTGATGTGTGATACATTTCAGTTCCCGTGGATGTTGATGGCTACTTTTTGGTCTCTGATTCAGAATGAGTCATTGCTAGGAAGGAAAGGAAAAGTTTATAGAGATTCTAGCACTTTTGAAcggaaaaaatataaataaataaaagacaaagaagGCCCGACCCAAGGAGAtctataacattttaaagaagtttCCAGCTACAGCATTGATTTTATCCAGAAACCAAATAAGCCAAATGTGCTCATGAATGTAAAAAGTGCTTTTCCCCCCCATTGAAAGGCTTCACTCAAAGTCATTTGAAACGTGACGCGAAGGCAGTCGATAATGATATCCGCAACAAACGTCATAATGAGCGTCAACACCGCTTTTGACCCTCGCTGTGAGTTTGAAATCTTCAAGCTAACCCCCCTCTCGATCTCTATTGGAAATGGAGGGCTATATTTGGAGGAGTGCGATGATGTCACAAGTGGTTGAGGATAGGAGCCTATAACAGAGAGGATGgagcgagtgtgtgagtgtttgtgtgaaaaacagAGACAACGCCGGCACCTTCAGGAGCTGCTGTCCACCGCTGGAAGAACAAATACAAGTATTTCTGTCTGCCATGCATCATCTGAAGCTGCCCTCCCAGATCCTGATCTTCCTTGTGATGCTGCAATGTGTTGCCACAGTCCCTTACAACAGGCAAGTCTTTTCACTCAAtgtaaaaagtacaattttccttgttagtttttatttttattattactatcgCTGATCTATTTTAGGATTCTCCTAATCTGTTTCTTAAAACTAAGAATTCCTAATTAGCATAACCTAATGTAGTTAGGTTGATTTTGAcgaattaaataatatttttttatttagaattagtTCATTCAAAGGTTAACACTTTAtagaattcaaatattaaatatgaactcTGTGATTGTAGATTTCAGGTTCACTGAAAACAATGGTAATTTATAAACTGTAACATTTAACTTAACTGTTTTCATTAAAgtcaaaatatgatttaatataactgatttaatcaaacacattttcattccaatttttagacatttagacTATTTAGGCATAAaaatgggaagaaaaaaaatcataatttgaaCATTCTACCATGATTTTAAGCTTATGCCTTAAGAACAtgataatgcataattattgCTGCGTGCATTCGTGTCAATATGtctcattaaaacataaaacatttctttctttattatattCAGTAAGTGGATCTAAACCTTTTATCAATGTTGTCCAAATCCTaaaatggaaatgcatttttgcctttttttattaacttttttgatccactgtgtatattttttatgttttttttattttttattattgaccCCATAAGCCAAAAATGTAATACCGGCACATCCATAATtcatattcaattttatttgcgATCTAGATGAACTATAATCTATATAATACTAAGTAATCCACATACTTCCATTTTGTTTGAAAGAATTCACTATAATTATGGATCATATGAAAGTGTCAAGTAcagtaaatacaataaaaagtccAATTTAAAACTACCACTGACTTTTTTTTGGTATAATTTAACGTATTCGGATTAAGTTAGCCAAATAAAAGTGTAAGTTTAAAGTTAACACGTCAAATAACGGTTTCAGCTCACCTAACAAAAAAGGTTCACGTGAGGCAGTGTCCTTGTAACAAGATGTAACAAGTGTGTAGAAGTGCGTGTAAGTGATATGACCAGCGGGCGCACATGATCCACTTCAGAATATCATCACAGTCAGGGAAAGTGGCACTTCCCAAGCAGCTCTGGATGAAATGGTGCTTCGCGGCCTCTTTCGTCGACAGGTACTCCCTTTTCTCCAACGAAAAGCCGGATGACTCGCAAGAGGTCGCCGGATGGCTGGTTACAGATCTATCTGACAATCCGTCTGCGAGTTTTACGAGGCCACGGCCTCCAAGGGGCCTCACCGCAGTCGACAGCCATCACATGGAAAAGCGGAAGTGCAACACAGCCACCTGCGTGACTCAGAGATTAGCAGACTTTCTCATCCGATCCAGCAACACCATCGGCACCGTCTACGCGCCAACCAACGTAGGAGCCAACACTTACGGGAAGAGAGACTTGCTGCGGTCGCCCATCTATCCGCCCCTATAGTTCAAATGCAAACGCAGCtgaaaatacagtcaaataaatgtaatatgtataataataaaggatATTATTCTGTTcgtttattttatcattattatctattatcgttattattgttgtttttttttcccagagtaTAAAAGAGCCAGTGCCTTTTGGTGTAAACAACTGTTTGCAGCATTTTCAGTATTGGATAAATCTTGCATGTCAATAAGGACATATAGTGTTTCGCAGCATGTTATGACGATGGCATAcgaataaaaatgtgttataaaaatGACGGGAACAGCAAAGACGAATTTACGCTTTGTtttcgattttttttgtttcctaataaaagaaagaaaaatatgtttctctctgctcggtgttattataatgttattatagtgttattataatgttattatagtgttattataattataaaccCATTGGAGATTTTACGTGGAAAGAATTGCAACGAGAACAAGAAAATAGATGATATATAACCCTCGACAGAAAGTATGCCGACCGTACGACCCGCCTGGCGCCGTCCtcgctgtgtgtttttttgatgaACACGAATAAGTTAATGCACACCAGCATCAAGTGGTCGCATACATCGATTACAGCCATGAAAACATAGCATAGTTAATTATAGGCCTCTCTG

Function

GO: NA

KEGG:

id description
K08039 IAPP; islet amyloid polypeptide

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237707.1 True 3343 mRNA 0.36 3 13683225 13687640

Neighbor

gene id symbol gene type direction distance location
pyroxd1 pyroxd1,ryroxd1,LOC107597005,LOC107584714,LOC107689253,LOC107689716 coding downstream 4137 13674271 ~ 13679088 (-)
LOC122343493 LOC107726837,LOC107748473,LOC107689714,LOC107584715 coding downstream 18088 13652525 ~ 13665137 (-)
slc6a1l LOC107597007,LOC107584717,LOC107689715,LOC107748475,LOC107689236,LOC108427058,LOC105916091 coding downstream 35176 13635613 ~ 13648049 (-)
b4galnt3a b4galnt3a,LOC107689248,LOC107689733,LOC107748486,LOC107584744 coding downstream 169821 13502936 ~ 13513404 (-)
st8sia1 st8sia1,LOC107748471,LOC107755164,LOC107567669 coding downstream 188798 13484786 ~ 13494427 (-)
LOC122343398 LOC107726825,LOC107584742,LOC107689735 coding upstream 14743 13702383 ~ 13708079 (-)
slco1e1 slco1e1,LOC107584713,LOC107716166,LOC107689719,LOC107597035 coding upstream 21152 13708792 ~ 13717223 (-)
slco1d1 LOC107689241,LOC107597003,LOC107584712,LOC107689720,LOC107689242,LOC107726840 coding upstream 30964 13718604 ~ 13729434 (-)
LOC122342857 LOC107689242,LOC107584712 coding upstream 48965 13736605 ~ 13748988 (-)
LOC122342931 LOC107689242,LOC107689241,LOC107584712,LOC107689720,LOC107597003 coding upstream 63194 13750834 ~ 13760856 (-)
G28434 iqsec3,LOC107689235,LOC106609634,LOC107689713 non-coding downstream 70454 13610216 ~ 13612771 (-)
LOC122342564 NA non-coding downstream 338968 13343726 ~ 13344257 (-)
G28377 NA non-coding downstream 363477 13311873 ~ 13319748 (-)
G28359 NA non-coding downstream 431191 13250651 ~ 13252034 (-)
G28353 NA non-coding downstream 437837 13242506 ~ 13245388 (-)
G28545 LOC107689243,LOC107689721,LOC107726844,LOC107569223,LOC107566846 non-coding upstream 133056 13820696 ~ 13827052 (-)
G28564 NA non-coding upstream 179137 13866777 ~ 13867298 (-)
G28544 NA non-coding upstream 181782 13869422 ~ 13870614 (-)
G28568 NA non-coding upstream 192391 13880031 ~ 13880847 (-)
G28569 NA non-coding upstream 193665 13881305 ~ 13882012 (-)
G28397 vezt,metap2,metap2a,LOC107755144,LOC107689227,LOC107597031,LOC107667718,LOC107755160,LOC107689230,LOC107597011 other downstream 250522 13411624 ~ 13432703 (-)
tmcc3 tmcc3,LOC107689246,LOC107667715 other downstream 321287 13316932 ~ 13361938 (-)
tmem110l tmem110l,LOC107597025,LOC107748459,LOC107675974,LOC107555827,LOC107666935 other downstream 496335 13176961 ~ 13186890 (-)
cpm cpm,LOC107728505,LOC107710685,LOC107666948,LOC107669712 other downstream 1194044 12465612 ~ 12489181 (-)
G28093 slc35e3,LOC107710682,LOC107556774,LOC107737854 other downstream 1667458 12014631 ~ 12015767 (-)
LOC122343399 LOC107726825,LOC107689735,LOC107584742 other upstream 4831 13692471 ~ 13698715 (-)
LOC122343280 NA other upstream 127934 13815574 ~ 13831851 (-)
G28575 alg10,LOC107726832,LOC107689747,LOC107721156,LOC107666210,LOC107600015,LOC107569225 other upstream 287717 13975357 ~ 13980559 (-)
cerk cerk,LOC107710741,LOC107689729,LOC107552286,LOC107600034,LOC107721152 other upstream 467852 14155492 ~ 14176742 (-)
LOC122342862 celsr1a,LOC107666207,LOC107710744,LOC107569230,LOC107721151,LOC107600014,LOC107689740 other upstream 1000233 14687873 ~ 14704622 (-)

Expression


Co-expression Network