ipo8 (ipo8,LOC107726055,LOC107580646)


Basic Information

Item Value
gene id ipo8
gene name ipo8,LOC107726055,LOC107580646
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 4047051 ~ 4062047 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237731.1
CTGGGGCAGGGCTGCCTGTAAGATCCGAGACATCTGATCGTCCGCGCATCTGTCCGATAGTCCAaagtttattcaaattaatcCATCGCACCGGGCCCAATGGATCCCAATCGAATCATACAAGCTCTGAAGGGCACCATAGATCCGAATCTCAGGCTAGCGGCTGAGAATGAGCTCAACCAGtcctACAAGATCATCAACTTCGCCCCAACTCTGCTGCAGATCATTGTTTCGGACCAGGTGGAGTTTCCTGTCCGGCAGGCAGCTGCCATCTACTTGAAGAACATGGTGAGTCAGTACTGGCAGGACCGAGAGCCCACACTGGGAGAGGTGGTGTTTCCTTTCAACATCCATGAAAACGATCGCGGACAGATCCGAGAAAACATGGTGGAGGCCATTATTCGCTGCCCAGAGTCTATAAGGGCTCAGCTGACGGTGTGTTTGCGTGCCATAATAAAACACGACTTTCCTGGACGGTGGACGGGTGTAGTGGACAAAATTAACCTATACCTGCAGTCACCAAACAGTGGGAGCTGGTACGGGAGTCTGCTCGCTCTTTACCAACTCGTCAAAAACTACGAGTTTAAGAAGGCTGAGGAGCGAGACCCTCTGTTAGCTGCCATGCAGATCTTCTTGCCCCGGCTCCAGCAGCTCATCACTCAACTCCTGTCTGATGCCACCTTCATCTCAGTTCTGATCCAAAAGCAAATCCTGAAGATTTTCCACGCTCTTGTACAGTATTCCCTACCGCTACAGCTGATCAATAACACCGTCATGACCCACTGGATGGAGATCCTGCGCACAGTTGTGGATCGGGACGTCCCTGCAGAAACCCTGGAAGCTGATGAGGACGACCGACCGGAACTGATCTGGTGGAAATGCAAGAAATGGGCTCTGCACATCATCATGAGAATGTTTGAGAGATATGGCAGTCCAGGAAATGTGACGAAGGAATATGTGGAGTTTGCAGACTTTTTCTTGAAGACGTACGCTGTAGGAATCCAGCAGGTCTTGTTGAAAGCGATTGGCCAGCACCGGCAGAGGCAGTACGTGAGTCCTCGTGTCCTCCAGCAGGCTCTGAGCTACATGACTCAGGGGGTGTCTCACTCGCTCACATGGAGACAGATGAAACCGCACATGCAGACTATCACTCAGGAGGTGGTGTTTCCTCTGATGTGCTATAAGGATGAAGATGAAAGACTGTGGCAGGAAGATCCGTACGAGTACATCCGCATGAAATTTAatATGTATGATGATCACGTGTCTCCAGCCACGGCCGCCCAGACTCTGTTGTGTACAGCAGCCAGGAAAAGGAAGGAGgtcTTGCCTCAGATGATGGAGTTTTGCCATCAGATCCTCATGGATCCCAACGCTGACCCCCGCAGGAAGGACGGGGCCCTGCATGTGATCGGTGCCTTGGCTCAACCCTTGTTAAAGAAGCGGGTGTACAGGGACCAGATGGAGCTCATGTTACAAAACTATGTGTTTCCTCTGCTCAACTCTAATCTTGGCTACTTAAGGGCCCGGtcgtGCTGGGTGCTGCACTCCTTCAGTCCTCTGAGGTTTCATAATGAGCTGGTCCTGAGAAACGCTGTGGAGCTGGTCAAGCAGAACCTGGTTGATGACAAGGAGATGCCTGTCAAAGTGGAGGCAGCCATTGCACTGCAGACGCTGGTCAGGAACCAGGAGCAAGCCAAGGTCTACGTCCGACCCTTTATCAAGCCTGTGATGCAGGAGCTGCTGCACATCATCAAGGAGACGGAGAACGATGACCTCACCAGCGTCATTCAGAAGATGATCTGTGAATACAGCGAGGAAGTGGCCGTCATCGCCGTGGATATGACGCAGAACCTGGCCGAGATCTTCAGCAAGATTCTCCAGAGTGAAGAATACGAGGAAAGTGAAGATAAGACTGTGATGGCTCTCGGTATCCTCAGCACCATAGACACTATCCTCACAGTCATGGGGGACCGAAAAGAGATCAGTCAGCAGCTGGAGGGAATATGCCTGCAGGTGATCGGTCTCGTCCTCCAGAAACCCATCATAGGTatggcagAGTTTTATGAGGAGATCTTGTCGCTGGCGTTCGGACTCACCTGTTATTCCATCTCCCCTCAGATGTGGCAGCTGTTGGGGGTCCTGTACGACGTCTTCCAGCATGACTGCTTTGACTACTTCACAGATATGATGCCCCTCTTGCACAATTATGTTACTGTGGACACAAATATGCTGCTATCAGACCCCAAATACCTGGAGGTCATTTACACCATGTGCAAAAAGGTCCTAACTAGCGATGCTGGGGAAGACCCAGAATGCCATGCTGCTAAGCTTCTAGAGGTCATTATATTACAGTGTCGTGGACGTGGCATTGACCAGTGTATCCCTCTGTTCGTGGAGGCCGTGTTGGAGCGGTTAACACGAGGTGTGAAGTCCAGCGAGCTTCGCACCATGTGTCTTCAGGTGGTAATCGCAGCTCTGTACTACAGCCCCACCGTACTGATACACACACTGGAGAACATCCGCTTCCCTCACAGCCCAgagccaatcacagcacagtTCATCAACCAGTGGATGAACGACACCGAGTTCTTCTTAGGACTGCACGATCGTAAGATGTGCATCATTGGGCTGAGTGTTTTGATGGAGCTGCCCAGCCGCCCCGCGGTCCTGGAGGAAGTTGCAGGTCAGATCGTTCCCtccatcctcctcctcttcttggGTTTAAAGCACATCTACTCCTCCCGAGTGCTCAACAAACCGGAGCAGCTCGCCAGAGCTCAGGGcacagaggaggaagagaacgAGGAGATACCTAGCGACGAGGATGAGGTCGGACAGAAAGGCATGGCCCTGCAGTCGTCCGGCGCTCCCACTGGGAATGacaatgaagatgaagatgatgaggaCGATGATGAATACTGGGATGATGAAGGTCTGGAGGGGACCCCATTAGAGGAATACAGTACACCACTGGACTATGACAACGGAGAGGATGAATATCAGTTCTTCACCGCCTCCCTGCTCCGTGTTCAGAGTTCAGATGCAATCTGGTATCAGTCCCTCACATCACCTCTGAGCGAAGACCAGAGAAAGCAACTGCAGGAGATCTATAACCTTGCCCAGCAGAGGAGGAGTGCAGGAGTCAAGGGACTGTGAGATGTTCCAGTTGTTCTGAGGCAGGTCGGGGATACCTGACACTTCGGATTTGGATCTGTACAAAGTTCTGACGCCGAAAACAGCTTGAACTCTGGTGACTAGAGACATCTCACTCAGGGTGGATGGGATCTTTAACCCAGGACCCAAAGCAAGCTCTTCAGATTGTTGACTCTTAATAGGAACACTGAGACATCATCAAAACTGGTCAGAAAGGCCCCGGTGAGGTCGAAGAGGTTATTCTGGGTCACCCATTCCctgaagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgcgcaTTTGTACAGAATTTTgggtgtttgtgcatgtgtgcagacgtatgtgtgtgtgtgtgtgtgtgtgtaagtaatTGAAtgttatatattcaatatacaGTCTCTCCTCCATTTGCAATGAGTCAGTAAGAAACTCGACCGAGGCTGTGAAGTGAGGCATGTCAAGacgagccagagagagagacggacggACACCGCTTCAGACTGACACACAGATGGAGGGATTTGTCACGTTGGTCAGTGCCTTCAGAGATACGTAGGCATTTTTCTGCCCAAACAGATCATGTGCACTGGCTAGAAGTCAGAAGGACGATGTTTATAGCTGTcgtatgtttgtatgtttcagagtttgtttttgtaacagTCAGTTTTCAGAATTAACTTAAGTCATAAAAGTTAATATAACATGAACGGTTGAACGGT
>XM_043237732.1
CTGGGGCAGGGCTGCCTGTAAGATCCGAGACATCTGATCGTCCGCGCATCTGTCCGATAGTCCAaagtttattcaaattaatcCATCGCACCGGGCCCAATGGATCCCAATCGAATCATACAAGCTCTGAAGGGCACCATAGATCCGAATCTCAGGCTAGCGGCTGAGAATGAGCTCAACCAGtcctACAAGATCATCAACTTCGCCCCAACTCTGCTGCAGATCATTGTTTCGGACCAGGTGGAGTTTCCTGTCCGGCAGGCAGCTGCCATCTACTTGAAGAACATGGTGAGTCAGTACTGGCAGGACCGAGAGCCCACACTGGGAGAGGTGGTGTTTCCTTTCAACATCCATGAAAACGATCGCGGACAGATCCGAGAAAACATGGTGGAGGCCATTATTCGCTGCCCAGAGTCTATAAGGGCTCAGCTGACGGTGTGTTTGCGTGCCATAATAAAACACGACTTTCCTGGACGGTGGACGGGTGTAGTGGACAAAATTAACCTATACCTGCAGTCACCAAACAGTGGGAGCTGGTACGGGAGTCTGCTCGCTCTTTACCAACTCGTCAAAAACTACGAGTTTAAGAAGGCTGAGGAGCGAGACCCTCTGTTAGCTGCCATGCAGATCTTCTTGCCCCGGCTCCAGCAGCTCATCACTCAACTCCTGTCTGATGCCACCTTCATCTCAGTTCTGATCCAAAAGCAAATCCTGAAGATTTTCCACGCTCTTGTACAGTATTCCCTACCGCTACAGCTGATCAATAACACCGTCATGACCCACTGGATGGAGATCCTGCGCACAGTTGTGGATCGGGACGTCCCTGCAGAAACCCTGGAAGCTGATGAGGACGACCGACCGGAACTGATCTGGTGGAAATGCAAGAAATGGGCTCTGCACATCATCATGAGAATGTTTGAGAGATATGGCAGTCCAGGAAATGTGACGAAGGAATATGTGGAGTTTGCAGACTTTTTCTTGAAGACGTACGCTGTAGGAATCCAGCAGGTCTTGTTGAAAGCGATTGGCCAGCACCGGCAGAGGCAGTACGTGAGTCCTCGTGTCCTCCAGCAGGCTCTGAGCTACATGACTCAGGGGGTGTCTCACTCGCTCACATGGAGACAGATGAAACCGCACATGCAGACTATCACTCAGGAGGTGGTGTTTCCTCTGATGTGCTATAAGGATGAAGATGAAAGACTGTGGCAGGAAGATCCGTACGAGTACATCCGCATGAAATTTAatATGTATGATGATCACGTGTCTCCAGCCACGGCCGCCCAGACTCTGTTGTGTACAGCAGCCAGGAAAAGGAAGGAGgtcTTGCCTCAGATGATGGAGTTTTGCCATCAGATCCTCATGGATCCCAACGCTGACCCCCGCAGGAAGGACGGGGCCCTGCATGTGATCGGTGCCTTGGCTCAACCCTTGTTAAAGAAGCGGGTGTACAGGGACCAGATGGAGCTCATGTTACAAAACTATGTGTTTCCTCTGCTCAACTCTAATCTTGGCTACTTAAGGGCCCGGtcgtGCTGGGTGCTGCACTCCTTCAGTCCTCTGAGGTTTCATAATGAGCTGGTCCTGAGAAACGCTGTGGAGCTGGTCAAGCAGAACCTGGTTGATGACAAGGAGATGCCTGTCAAAGTGGAGGCAGCCATTGCACTGCAGACGCTGGTCAGGAACCAGGAGCAAGCCAAGGTCTACGTCCGACCCTTTATCAAGCCTGTGATGCAGGAGCTGCTGCACATCATCAAGGAGACGGAGAACGATGACCTCACCAGCGTCATTCAGAAGATGATCTGTGAATACAGCGAGGAAGTGGCCGTCATCGCCGTGGATATGACGCAGAACCTGGCCGAGATCTTCAGCAAGATTCTCCAGAGTGAAGAATACGAGGAAAGTGAAGATAAGACTGTGATGGCTCTCGGTATCCTCAGCACCATAGACACTATCCTCACAGTCATGGGGGACCGAAAAGAGATCAGTCAGCAGCTGGAGGGAATATGCCTGCAGGTGATCGGTCTCGTCCTCCAGAAACCCATCATAGAGTTTTATGAGGAGATCTTGTCGCTGGCGTTCGGACTCACCTGTTATTCCATCTCCCCTCAGATGTGGCAGCTGTTGGGGGTCCTGTACGACGTCTTCCAGCATGACTGCTTTGACTACTTCACAGATATGATGCCCCTCTTGCACAATTATGTTACTGTGGACACAAATATGCTGCTATCAGACCCCAAATACCTGGAGGTCATTTACACCATGTGCAAAAAGGTCCTAACTAGCGATGCTGGGGAAGACCCAGAATGCCATGCTGCTAAGCTTCTAGAGGTCATTATATTACAGTGTCGTGGACGTGGCATTGACCAGTGTATCCCTCTGTTCGTGGAGGCCGTGTTGGAGCGGTTAACACGAGGTGTGAAGTCCAGCGAGCTTCGCACCATGTGTCTTCAGGTGGTAATCGCAGCTCTGTACTACAGCCCCACCGTACTGATACACACACTGGAGAACATCCGCTTCCCTCACAGCCCAgagccaatcacagcacagtTCATCAACCAGTGGATGAACGACACCGAGTTCTTCTTAGGACTGCACGATCGTAAGATGTGCATCATTGGGCTGAGTGTTTTGATGGAGCTGCCCAGCCGCCCCGCGGTCCTGGAGGAAGTTGCAGGTCAGATCGTTCCCtccatcctcctcctcttcttggGTTTAAAGCACATCTACTCCTCCCGAGTGCTCAACAAACCGGAGCAGCTCGCCAGAGCTCAGGGcacagaggaggaagagaacgAGGAGATACCTAGCGACGAGGATGAGGTCGGACAGAAAGGCATGGCCCTGCAGTCGTCCGGCGCTCCCACTGGGAATGacaatgaagatgaagatgatgaggaCGATGATGAATACTGGGATGATGAAGGTCTGGAGGGGACCCCATTAGAGGAATACAGTACACCACTGGACTATGACAACGGAGAGGATGAATATCAGTTCTTCACCGCCTCCCTGCTCCGTGTTCAGAGTTCAGATGCAATCTGGTATCAGTCCCTCACATCACCTCTGAGCGAAGACCAGAGAAAGCAACTGCAGGAGATCTATAACCTTGCCCAGCAGAGGAGGAGTGCAGGAGTCAAGGGACTGTGAGATGTTCCAGTTGTTCTGAGGCAGGTCGGGGATACCTGACACTTCGGATTTGGATCTGTACAAAGTTCTGACGCCGAAAACAGCTTGAACTCTGGTGACTAGAGACATCTCACTCAGGGTGGATGGGATCTTTAACCCAGGACCCAAAGCAAGCTCTTCAGATTGTTGACTCTTAATAGGAACACTGAGACATCATCAAAACTGGTCAGAAAGGCCCCGGTGAGGTCGAAGAGGTTATTCTGGGTCACCCATTCCctgaagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgcgcaTTTGTACAGAATTTTgggtgtttgtgcatgtgtgcagacgtatgtgtgtgtgtgtgtgtgtgtgtaagtaatTGAAtgttatatattcaatatacaGTCTCTCCTCCATTTGCAATGAGTCAGTAAGAAACTCGACCGAGGCTGTGAAGTGAGGCATGTCAAGacgagccagagagagagacggacggACACCGCTTCAGACTGACACACAGATGGAGGGATTTGTCACGTTGGTCAGTGCCTTCAGAGATACGTAGGCATTTTTCTGCCCAAACAGATCATGTGCACTGGCTAGAAGTCAGAAGGACGATGTTTATAGCTGTcgtatgtttgtatgtttcagagtttgtttttgtaacagTCAGTTTTCAGAATTAACTTAAGTCATAAAAGTTAATATAACATGAACGGTTGAACGGT

Function

symbol description
ipo8 Predicted to be involved in protein import into nucleus. Predicted to act upstream of or within intracellular protein transport. Predicted to be active in cytosol and nuclear envelope. Orthologous to human IPO8 (importin 8).

NR:

description
PREDICTED: importin-8 isoform X2

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0005634 nucleus cellular_component

KEGG:

id description
K18755 IPO8, RANBP8; importin-8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237731.1 True 3878 mRNA 0.51 25 4047051 4062047
XM_043237732.1 False 3869 mRNA 0.51 25 4047051 4062047

Neighbor

gene id symbol gene type direction distance location
srgap1b srgap1b,LOC107658816,LOC107580603,LOC107743491,LOC107656311,LOC107725889 coding upstream 7646 4008341 ~ 4039405 (+)
nfyba nfyb,nfyba,LOC107656315,LOC107658836,LOC107592261,LOC107581291,LOC107743639,LOC106561000 coding upstream 71264 3973075 ~ 3975787 (+)
slc41a2b slc41a2b,slc41a2,LOC107658826,LOC107726006,LOC107743571,LOC107580572,LOC107656312 coding upstream 87791 3909143 ~ 3959260 (+)
aldh1l2 aldh1l2,LOC107580561,LOC107592231,LOC107743541,LOC107658818,LOC107656317 coding upstream 141120 3897077 ~ 3905931 (+)
samm50l samm50,samm50l,LOC107725949,LOC107592232,LOC107658828,LOC107656318,LOC107580535 coding upstream 151176 3889437 ~ 3895875 (+)
tmtc1 tmtc1,LOC107725887,LOC107656308,LOC107592224,LOC107580673,LOC107658819,LOC102198433 coding downstream 1810 4063857 ~ 4097271 (+)
ovch1 LOC107658825,LOC107592259,LOC107736419,LOC107743570 coding downstream 36016 4098063 ~ 4102180 (+)
lmf2b LOC107658822,LOC107592223,LOC107656307,LOC107580684,LOC107743574,LOC107725886 coding downstream 40731 4102778 ~ 4113721 (+)
kitlgb LOC107725965,LOC107580747,LOC107656304,LOC107658725 coding downstream 53419 4115466 ~ 4121307 (+)
lsm8 lsm8,LOC107592220,LOC107580766 coding downstream 63301 4125348 ~ 4126807 (+)
LOC122343346 NA non-coding upstream 39903 3988683 ~ 4007148 (+)
LOC122343347 NA non-coding upstream 239153 3806939 ~ 3807898 (+)
G25537 NA non-coding upstream 338199 3708537 ~ 3708852 (+)
G25536 NA non-coding upstream 339987 3706859 ~ 3707064 (+)
G25535 NA non-coding upstream 344680 3701834 ~ 3702371 (+)
G25823 tymp,LOC107725998,LOC107580729,LOC107743597 non-coding downstream 66876 4128923 ~ 4129250 (+)
G25824 NA non-coding downstream 67292 4129339 ~ 4129628 (+)
G25825 NA non-coding downstream 68097 4130144 ~ 4130422 (+)
G25827 NA non-coding downstream 70061 4132108 ~ 4132552 (+)
LOC122342475 NA non-coding downstream 162536 4224583 ~ 4227231 (+)
G25551 NA other upstream 308457 3737502 ~ 3738594 (+)
G25514 NA other upstream 544957 3481629 ~ 3502094 (+)
erc1b erc1,LOC107725987,LOC107656325,LOC107580227,LOC107743718 other upstream 740293 3119515 ~ 3306758 (+)
ninj2 ninj2,LOC107725989,LOC107584020,LOC107743858,LOC107656339,LOC107658851,LOC107581271 other upstream 929057 3099737 ~ 3117994 (+)
lyrm5a LOC107725960,LOC107578730,LOC107658915,LOC107710125,LOC107583994 other upstream 2051515 1994240 ~ 1995536 (+)
G25837 si:dkey-153k10.9,LOC107592247,LOC107658817,LOC107743973,LOC107656294,LOC107581279 other downstream 167582 4229629 ~ 4231092 (+)
G25838 si:dkey-153k10.9,LOC100147981,LOC107743973,LOC107656294,LOC107725885,LOC107592247 other downstream 170861 4232908 ~ 4235244 (+)
G25958 NA other downstream 488116 4550163 ~ 4628899 (+)
LOC122343397 LOC107580843,LOC107725884,LOC107658833,LOC107656293,LOC108428166 other downstream 867424 4929471 ~ 4944880 (+)
pcloa pcloa,LOC107757237,LOC107694308,LOC107577557,LOC107560734 other downstream 1292285 5354332 ~ 5397886 (+)

Expression


Co-expression Network