CI01000004_10610634_10613290 (ENG2B)



Basic Information


Item Value
gene id CI01000004_10610634_10613290
gene name ENG2B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 10609780 ~ 10613630 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000004_10610634_10613290.mRNA
TTATATAGACATAGGCTACTGACTTTACCGTAATAGCACAGCAATTCATACTGTAGAATAAGATGTCTACGAAATTATGAAATTGGACCGATTGTGACCTACTACCGAATTGAGAGTAAAAATGAACACACCCCTCCCCCAGTGCGATTTATGAACGATAGTTTCACGAGACTGCTAAAAAAGATAGCGATTCCACACACAGACAAATAAACAAATGTGTTTGTCAAATAATTCGTTTTTCATGAGTTAGTGATTTGAAAACGCAAAATATTGGAATGCTGATCACTTCTGAGCAATAGAGTAGCTACTATCGCTTTAAGTATTGAGAATAAGGCGAGGTTGGATGCTGTCATTTACTCCAGAGTCACTGGGTCATGTGATAAAATTTCGCTCCATTTATTGGCCAAAGGCACGTGTCTAGGATACCGGACTGCGACGTCACCCGGGGGACTCGTATTAAAAATAAGAACAAAAATCCGTAGTGAAAGTATTCTAGAGCCAGTTTGCGTTTCCTTGTTTACTAGAGCAGGTCTACTGCTTTGATACTGCATAGATTAAATTTGCCTGTATGTTTTATAAAGTAGATATAAAGACAATTGCAAGGGCACACTGTGGAATTAATTTTTAAAACTATGTTTTTTCTTTCTACGCACACAAGGCGGTTTCGTCGTATTTAACCGACAAAAGAATCAGAAAAAAGGATTTGTCCTTTTTTCCCCTGTTTGTTTCTCTTTGCAGTGAGACTTAAAAAATAAGGAAAATATAGGCTACAACAAAAACTGGAACACAAACATACGTGTGTGTGCGCGCGCGAGAGAGAAAGGGGTTAAAAAGAACATTTGGAGAGTTTCACTATGGAAGAAAATGATCATAGCAACAGAGATGTGGAGCGTCAGGATTCAGGCGATGAGTCCAACAGGGCTATTTTACCCCTGTTGCAGGCTCCTGGAAACCTACTCCCTCACAGAATCACCAACTTTTACATCGACAACATTTTGAGACCAGACTTTGGGCGCAGGAAAGAAGGGACCAGACGCGACGAAATTAATATAGTTGAAAGAGAGAACCGCTGTCCATCGGCTCCCGGATCGGGACAGGTAGGAGCTCCAGTGTCAGGGGAAGGAACCTCGAGCCCTCACCCAGTAAGCGCGTCTAAAAAAACTGATATTACTGCAGACGCACCTCTGAAAGCCCGAGCAGAGACTGGAGATCAATGTTTAAGCTCAGATTCGGATTGCTCGCAAAGTAACGCTGCGCAGACGAACCAACAAATGCTTTGGCCTGCTTGGGTATATTGCACAAGATATTCAGACAGACCTTCATCAGGACCAAGATCCCGCAAACCAAAGAAGAAAAATCCAACCAAGGAAGACAAGCGGCCAAGAACAGCCTTCACAGCGGAGCAACTCCAGAGACTCAAGAATGAATTCCAGAATAACCGTTACCTGACGGAGCAAAGGAGGCAAGCTTTGGCCCAAGAACTCGGCCTCAACGAGTCTCAAATCAAAATCTGGTTTCAGAACAAAAGAGCGAAGATTAAAAAAGCTTCGGGGAGCAAAAACACACTTGCATTACACCTGATGGCACAGGGACTATACAATCACGCCACAACAACAAAGGACGACAAATCAGACAGTGATTAACGTGAAGGACAGGACATCTAAAATGCAATAATTTTAAAAAAGGGCCAGTGTACAAAATACCAGCATTAAACGGATGAAAACTATATGTATGAGATATGTTTCTGCAATATTATATGTATATATACTTTATGTGTACGGTGGTGTAAAACCTTTTCAATTAATATCACTGCTGTACACTGACTGAAACTTCAGATATAGTGCGCGAGGAAAAGGACGCTTCTTTATTTAAAAAGGGGGAGCGATTTGATTGACACTTGACGTTGAGCCACATGTGAACGTGTTTAATCCATGCTGAAGTCCAAAGATTTTTCCTGCTGCATTCAGGCAACTGTGATTTAAA

Function


GO:

id name namespace
GO:0043565 sequence-specific DNA binding molecular_function

KEGG:

id description
K09319 EN; homeobox protein engrailed

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000004_10610634_10613290.mRNA True 1983 mRNA 0.42 2 10609780 10613630
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Neighbor


gene id symbol gene type direction distance location
CI01000004_10582152_10586349 HTR5AB, HTR5A, HTR5AA coding upstream 23227 10582121 ~ 10586553 (+)
CI01000004_10514814_10550774 NA coding upstream 58860 10514814 ~ 10550920 (+)
CI01000004_10434104_10435287 PTF1A coding upstream 174211 10431833 ~ 10435569 (+)
CI01000004_10376389_10423302 DLGAP1A, DLGAP1 coding upstream 186478 10376389 ~ 10423302 (+)
CI01000004_10169407_10212947 CDH18 coding upstream 396591 10169407 ~ 10213189 (+)
CI01000004_10630265_10647904 NA coding downstream 16635 10630265 ~ 10647904 (+)
CI01000004_10683400_10692323 NA coding downstream 69770 10683400 ~ 10692565 (+)
CI01000004_10712377_10730563 KCNB2 coding downstream 98747 10712377 ~ 10730563 (+)
CI01000004_10736615_10738593 RDH10, RDH10B coding downstream 122985 10736615 ~ 10739026 (+)
CI01000004_10767883_10769627 TMEM70 coding downstream 154253 10767883 ~ 10769753 (+)
G30787 NA non-coding upstream 134829 10474750 ~ 10474951 (+)
G30780 NA non-coding upstream 155520 10453602 ~ 10454260 (+)
G30688 NA non-coding upstream 162043 10436230 ~ 10447737 (+)
G30681 NA non-coding upstream 264802 10208466 ~ 10344978 (+)
G30689 NA non-coding downstream 80287 10693917 ~ 10697207 (+)
G30839 NA non-coding downstream 87594 10701224 ~ 10701436 (+)
G30678 NA non-coding downstream 118757 10732387 ~ 10736123 (+)
G30861 NA non-coding downstream 137204 10750834 ~ 10751295 (+)
G30863 NA non-coding downstream 140327 10753957 ~ 10754306 (+)
G30797 NA other upstream 111992 10497376 ~ 10497788 (+)
CI01000004_08976512_08980033 TTPA other upstream 1628796 8976254 ~ 8980984 (+)
G28859 NA other upstream 2010177 8599235 ~ 8599603 (+)
CI01000004_08414451_08436256 NA other upstream 2158553 8414316 ~ 8439933 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 2953397 7654234 ~ 7656383 (+)
G31710 NA other downstream 1023621 11637251 ~ 11642400 (+)
CI01000004_11666900_11667179 NA other downstream 1051143 11666900 ~ 11667659 (+)
G31865 NA other downstream 1578500 12192130 ~ 12197418 (+)
CI01000004_12646972_12652534 NA other downstream 2029124 12646838 ~ 12652570 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 3409917 14035393 ~ 14039142 (+)

Expression


CI01000004_10610634_10613290(ENG2B) Expression in PRJCA010000

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
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CI01000004_10610634_10613290(ENG2B) Expression in each Bioproject

Bar chart with 23 bars.
CI01000004_10610634_10613290(ENG2B) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network


Homologous


species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015514 en2b coding NC_007113.7 CM002886.2 29976419 ~ 29979956 (+)