meig1 (meig1,LOC107592215,LOC107725971,LOC107581293,LOC107658840,LOC107744135)


Basic Information

Item Value
gene id meig1
gene name meig1,LOC107592215,LOC107725971,LOC107581293,LOC107658840,LOC107744135
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 4175425 ~ 4176610 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237764.1
ttttttttaaagcgatgTTGCTAGGAAACAAATGATGCGCGAGATTGTTCATGTTGACAATTCAGTCGTCTGTCACACACGTCGATAAATGATGTCCTGCTCAGTTTTACTGGATAACAACGCCAAGCCGAAGTCCATGAGCCGAGCAAAGCACTGGACAGGAGAGATTGAGAACCTCTACAGATTTCAACAAGCTGGATACAGAGATGAGATGGAGTACAGACAAATCAAACAAGTTGAGATTGACCGTTGGCCGGACACTGGGTTTGTGAAGAAGCTTCAGCGTCGGGATAACACCTTTTACTACTATAACAGAAAGAGGGAGTGTGAAGATCGAGAGGTCCATAAAGTGAAGGTGTACGCGTACTGACAGCTCTTCGACCTAGCCAGCACTTatgtcattttctatttttaagttttgtaaTACATTGTGTGGCTTTACAAAAGTGCATGATCAGAGTTGGTTCATTGTGTCTAAGTCTTGgtacaatttttaattaaaagaaattatttaaataagaa

Function

symbol description
meig1 Predicted to act upstream of or within cell differentiation and spermatogenesis. Predicted to be active in nucleus. Is expressed in nervous system; otic vesicle; pectoral fin musculature; and pronephric duct. Orthologous to human MEIG1 (meiosis/spermiogenesis associated 1).

NR:

description
meiosis expressed gene 1 protein homolog

GO:

id name namespace
GO:0030154 cell differentiation biological_process
GO:0007283 spermatogenesis biological_process
GO:0005634 nucleus cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237764.1 True 522 mRNA 0.40 3 4175425 4176610

Neighbor

gene id symbol gene type direction distance location
hspa14 hspa14,LOC107658827,LOC107592213,LOC107580804,LOC107656298 coding upstream 4736 4164737 ~ 4170689 (+)
lsm8 lsm8,LOC107592220,LOC107580766 coding upstream 48618 4125348 ~ 4126807 (+)
kitlgb LOC107725965,LOC107580747,LOC107656304,LOC107658725 coding upstream 54118 4115466 ~ 4121307 (+)
lmf2b LOC107658822,LOC107592223,LOC107656307,LOC107580684,LOC107743574,LOC107725886 coding upstream 61704 4102778 ~ 4113721 (+)
ovch1 LOC107658825,LOC107592259,LOC107736419,LOC107743570 coding upstream 73245 4098063 ~ 4102180 (+)
tmem243b tmem243b,tmem243,LOC107592214,LOC107744120,LOC107580823,LOC107656297 coding downstream 388 4176998 ~ 4180317 (+)
tspan12 tspan12,LOC107592202,LOC107658802,LOC107656244,LOC107565667,LOC107744106 coding downstream 238535 4415145 ~ 4429395 (+)
adm2a LOC107592207,LOC107743397,LOC107726065,LOC107580886,LOC107656286 coding downstream 640438 4817048 ~ 4827652 (+)
fbxo18 LOC107743400,LOC107658809,LOC107656287,LOC107581284 coding downstream 655800 4832410 ~ 4840605 (+)
glt8d2 glt8d2 coding downstream 665083 4841693 ~ 4847744 (+)
G25827 NA non-coding upstream 42873 4132108 ~ 4132552 (+)
G25825 NA non-coding upstream 45003 4130144 ~ 4130422 (+)
G25824 NA non-coding upstream 45797 4129339 ~ 4129628 (+)
G25823 tymp,LOC107725998,LOC107580729,LOC107743597 non-coding upstream 46175 4128923 ~ 4129250 (+)
LOC122343346 NA non-coding upstream 168277 3988683 ~ 4007148 (+)
LOC122342475 NA non-coding downstream 47973 4224583 ~ 4227231 (+)
G25846 NA non-coding downstream 76339 4252949 ~ 4253279 (+)
G25892 NA non-coding downstream 123057 4299667 ~ 4300306 (+)
G25889 NA non-coding downstream 146296 4322906 ~ 4323300 (+)
G25927 NA non-coding downstream 205565 4382175 ~ 4382506 (+)
G25551 NA other upstream 436831 3737502 ~ 3738594 (+)
G25514 NA other upstream 673331 3481629 ~ 3502094 (+)
erc1b erc1,LOC107725987,LOC107656325,LOC107580227,LOC107743718 other upstream 868667 3119515 ~ 3306758 (+)
ninj2 ninj2,LOC107725989,LOC107584020,LOC107743858,LOC107656339,LOC107658851,LOC107581271 other upstream 1057431 3099737 ~ 3117994 (+)
lyrm5a LOC107725960,LOC107578730,LOC107658915,LOC107710125,LOC107583994 other upstream 2179889 1994240 ~ 1995536 (+)
G25837 si:dkey-153k10.9,LOC107592247,LOC107658817,LOC107743973,LOC107656294,LOC107581279 other downstream 53019 4229629 ~ 4231092 (+)
G25838 si:dkey-153k10.9,LOC100147981,LOC107743973,LOC107656294,LOC107725885,LOC107592247 other downstream 56298 4232908 ~ 4235244 (+)
G25958 NA other downstream 373553 4550163 ~ 4628899 (+)
LOC122343397 LOC107580843,LOC107725884,LOC107658833,LOC107656293,LOC108428166 other downstream 752861 4929471 ~ 4944880 (+)
pcloa pcloa,LOC107757237,LOC107694308,LOC107577557,LOC107560734 other downstream 1177722 5354332 ~ 5397886 (+)

Expression


Co-expression Network