LOC122343360


Basic Information

Item Value
gene id LOC122343360
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1805589 ~ 1808700 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237778.1
ACCACACATGAATtccaaaatagttttgtttaacaaatataatatctattttaaataaaactgtgacATATATGACATGAAGAGAATGCAGTCGGAAAAGCACATGTACGACAAACGAAGAGAAGAACCATTTAGCAGCTGCTATGCTGTGGTTCATGCAACTATTTCTGCTTCCGGGTTTTACAACTCCCACTAGTGCAGACCAAATCAGACTGATTAATGGCATCAACTCTTGTTCTGGACGAGTGGAGGTTCTTTATAATGAAATATGGGGAACCGTGTGTGATGATGGCTGGGATCTAACAGACGCTGCAGTGGTGTGTAGAGAGATGGGATGTGGAGATGCTATAGAGGCAAAGAGCGCTGCTTATTTTGGCCCAGGATCAGGACAGATATGGATGGATGATGTAAACTGCACTGGTACTGAGTCTTCACTGATGAATTGTACGACACGTGGATGGGGAAAACATAACTGCCAACATTCCCATGATTCTGGAGTCATTTGTAACACAACTGTCAGGTTGGTGAATGGAGATGACAAGTGTTCTGGACGAGTGGAGGTTCTCCGTGAGGGTCAGTGGAAAACCGTGTGTGGTGATGACTGGGATCTAACAGACGCTGCAGTGGTGTGTAGAGAGATGGGCTGTGGGGGTGTCGTATATGCAAGTCGTGCCTTTTTTTACCAAGTACCAGGACAAATGTGGACGAAAAGTGTACAATGTACCGGGAGTGAATCTACATTGAAGAGCTGCAGAGCACAAGAAATGGCCTCCTGTAGTAGTAATAAAGCTGCTGGAGTCCTCTGCCAGCTTCCTGTCACACTGGTCAATGGCACTCATTCATGTTCTGGACTAGTGGAGGTCCGACACAATGGAATATGGGGAACAGTGTGTGGTGACGGCTGGGATCTAAAAGACGCCGCAGTGGTGTGTAGAGAGATGGGATGTGGAGATGCTATAGAGGCAAAGAGTCAAGCTTCTTTTGAACCAGGATCACAGCCGGTATGGATGAACAATGTGAGCTGTAATGGAACAGAGTCTACACTGAAGGACTGTGCGTTAAGCGGAAGAGTTCGACAAAACTGCAGCAATAAAAACTATGCTGGTGTTATCTGTGGACCCAAACTTCGACTGCAGAACGGTTCCAGCTCTTGTTCTGGACGAGTGGAGGTTCTTCATAATGGAACATGGGGAACAGTGTGTGATGATGACTGGGACATAAAAGACGCTGCAGTGGTGTGTAGAGAGATGGGATGTGGAGATGCTATAGAGGCAAAAAAAGGTGCGTTTTTTGGCACTGGTTCAGGACCAATATGGATGAATAATGTAAATTGCAATGGGAATGAGCTAGCTCTGAGGAAATGTAGATCATCTGGATGGGACGTACAGACCTGCAATCATATGGATGCTGGAGTCATCTGCCAATACAGCTACACCTATATCAACGATTCAAAAAGCTGGATTGATGCACTAGAATACTGCAGAACTCGTCACCAGACACTGGCGCACGTTTTAAATGCCATGGCACATGACTACATCACACAGATGCTGCAGGATAAAGGAGTCACTGATGGAGTGTGGATCGGGCTTGAGAGGAGTATGCTCTTCACTTGTTCACCCTGGCTGTGGACCGGTGGGTCGTATGTGGAGTATGCATTGTGGCATCAAGACTATCCAAAAGACCAAGAGACCATGTTTTGTGGAAAACTTTTTAAGAAGGAACAGAACGGGTTTGGATGGATTGATGCTTGCTGCCATGAGCGCCTGCCTTTCATCTGTCAGGATTGAAACACTAGGTGGAGCTGTATCCTTGTTTGAATCAGTTGGTGAAAAGCTATAGTAATGTGTAGCCCTGTGTGTTGGTATGTACTTGTATAAGATACtattaaaaaatctatatgaaatgtattttaaaattcacatgAAAATGCTCATCTTCTTTTCTGAGTTTATACTGAAATGATTTATGTGACTAATGAATCTTTAAACGTC
>XM_043237779.1
CAGTACATTAATATGCATACTCAATGTGAATAATATATCATATCTAACATATTTCTAGCTGCTATGCTGTGGTTCATGCAACTATTTCTGCTTCCGGGTTTTACAACTCCCACTAGTGCAGACCAAATCAGACTGATTAATGGCATCAACTCTTGTTCTGGACGAGTGGAGGTTCTTTATAATGAAATATGGGGAACCGTGTGTGATGATGGCTGGGATCTAACAGACGCTGCAGTGGTGTGTAGAGAGATGGGATGTGGAGATGCTATAGAGGCAAAGAGCGCTGCTTATTTTGGCCCAGGATCAGGACAGATATGGATGGATGATGTAAACTGCACTGGTACTGAGTCTTCACTGATGAATTGTACGACACGTGGATGGGGAAAACATAACTGCCAACATTCCCATGATTCTGGAGTCATTTGTAACACAACTGTCAGGTTGGTGAATGGAGATGACAAGTGTTCTGGACGAGTGGAGGTTCTCCGTGAGGGTCAGTGGAAAACCGTGTGTGGTGATGACTGGGATCTAACAGACGCTGCAGTGGTGTGTAGAGAGATGGGCTGTGGGGGTGTCGTATATGCAAGTCGTGCCTTTTTTTACCAAGTACCAGGACAAATGTGGACGAAAAGTGTACAATGTACCGGGAGTGAATCTACATTGAAGAGCTGCAGAGCACAAGAAATGGCCTCCTGTAGTAGTAATAAAGCTGCTGGAGTCCTCTGCCAGCTTCCTGTCACACTGGTCAATGGCACTCATTCATGTTCTGGACTAGTGGAGGTCCGACACAATGGAATATGGGGAACAGTGTGTGGTGACGGCTGGGATCTAAAAGACGCCGCAGTGGTGTGTAGAGAGATGGGATGTGGAGATGCTATAGAGGCAAAGAGTCAAGCTTCTTTTGAACCAGGATCACAGCCGGTATGGATGAACAATGTGAGCTGTAATGGAACAGAGTCTACACTGAAGGACTGTGCGTTAAGCGGAAGAGTTCGACAAAACTGCAGCAATAAAAACTATGCTGGTGTTATCTGTGGACCCAAACTTCGACTGCAGAACGGTTCCAGCTCTTGTTCTGGACGAGTGGAGGTTCTTCATAATGGAACATGGGGAACAGTGTGTGATGATGACTGGGACATAAAAGACGCTGCAGTGGTGTGTAGAGAGATGGGATGTGGAGATGCTATAGAGGCAAAAAAAGGTGCGTTTTTTGGCACTGGTTCAGGACCAATATGGATGAATAATGTAAATTGCAATGGGAATGAGCTAGCTCTGAGGAAATGTAGATCATCTGGATGGGACGTACAGACCTGCAATCATATGGATGCTGGAGTCATCTGCCAATACAGCTACACCTATATCAACGATTCAAAAAGCTGGATTGATGCACTAGAATACTGCAGAACTCGTCACCAGACACTGGCGCACGTTTTAAATGCCATGGCACATGACTACATCACACAGATGCTGCAGGATAAAGGAGTCACTGATGGAGTGTGGATCGGGCTTGAGAGGAGTATGCTCTTCACTTGTTCACCCTGGCTGTGGACCGGTGGGTCGTATGTGGAGTATGCATTGTGGCATCAAGACTATCCAAAAGACCAAGAGACCATGTTTTGTGGAAAACTTTTTAAGAAGGAACAGAACGGGTTTGGATGGATTGATGCTTGCTGCCATGAGCGCCTGCCTTTCATCTGTCAGGATTGAAACACTAGGTGGAGCTGTATCCTTGTTTGAATCAGTTGGTGAAAAGCTATAGTAATGTGTAGCCCTGTGTGTTGGTATGTACTTGTATAAGATACtattaaaaaatctatatgaaatgtattttaaaattcacatgAAAATGCTCATCTTCTTTTCTGAGTTTATACTGAAATGATTTATGTGACTAATGAATCTTTAAACGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237778.1 True 1991 mRNA 0.44 8 1805589 1808700
XM_043237779.1 False 1911 mRNA 0.45 7 1805830 1808700

Neighbor

gene id symbol gene type direction distance location
LOC122343361 LOC107725905,LOC107658738,LOC107584038 coding upstream 1023 1800486 ~ 1804566 (+)
si:dkey-14d8.21 LOC107725922,LOC107583962 coding upstream 7697 1792307 ~ 1797892 (+)
strip2 strip2,LOC107725919,LOC107656389,LOC107658739 coding upstream 21906 1762143 ~ 1783683 (+)
ahcyl2b ahcyl2,LOC107725924,LOC107710138,LOC107583963,LOC107658882,LOC107656398,LOC107579442 coding upstream 45220 1732155 ~ 1760369 (+)
tmem209 tmem209,LOC107725925,LOC107658886,LOC107583965,LOC107656402,LOC107579462 coding upstream 73904 1726783 ~ 1731685 (+)
mapk11 mapk11,LOC107725929,LOC107656380,LOC107579565,LOC107583972,LOC108442323,LOC103035641 coding downstream 592 1809292 ~ 1816478 (+)
mapk12b mapk12b,LOC107656379,LOC107710136,LOC107579544,LOC108442322,LOC103035956,LOC108279513 coding downstream 9323 1818023 ~ 1822750 (+)
LOC122342504 si:dkey-14d8.7,LOC107583991,LOC107658912,LOC107725942,LOC107656269,LOC107710135,LOC107601130,LOC107579872 coding downstream 14935 1823635 ~ 1825062 (+)
mrps18a LOC107583989,LOC107710130,LOC107656376,LOC107736677,LOC107581188 coding downstream 87461 1896161 ~ 1898257 (+)
pou3f2a pou3f2a,LOC107726028,LOC107583975,LOC107656268,LOC107579586,LOC107710088,LOC107658894 coding downstream 132042 1940742 ~ 1945597 (+)
G25030 NA non-coding upstream 16313 1788631 ~ 1789276 (+)
G25071 NA non-coding upstream 112200 1688978 ~ 1693389 (+)
G24968 LOC107583957,LOC107656385,LOC107579307,LOC107711491 non-coding upstream 247811 1556392 ~ 1557778 (+)
G24925 NA non-coding upstream 518516 1286612 ~ 1287073 (+)
LOC122342413 NA non-coding upstream 678209 1112895 ~ 1127380 (+)
G25086 NA non-coding downstream 21978 1830678 ~ 1830968 (+)
LOC122342405 NA non-coding downstream 91196 1899896 ~ 1901886 (+)
G25192 NA non-coding downstream 97130 1905830 ~ 1906106 (+)
G25193 NA non-coding downstream 98500 1907200 ~ 1908927 (+)
LOC122342875 NA non-coding downstream 220096 2028796 ~ 2033049 (+)
LOC122342451 NA other upstream 17493 1784237 ~ 1788096 (+)
LOC122343488 NA other upstream 132630 1670512 ~ 1672959 (+)
LOC122342419 coa6,LOC107726010,LOC107583951,LOC107658937 other upstream 473746 1329452 ~ 1331843 (+)
ndufa5 ndufa5,LOC107725958,LOC107658774,LOC107579922 other upstream 514365 1288297 ~ 1291224 (+)
LOC122342481 LOC107584054,LOC107658775,LOC107725972,LOC107711476,LOC107581286,LOC107656415,LOC107725915 other upstream 556420 1245578 ~ 1249169 (+)
lyrm5a LOC107725960,LOC107578730,LOC107658915,LOC107710125,LOC107583994 other downstream 185540 1994240 ~ 1995536 (+)
ninj2 ninj2,LOC107725989,LOC107584020,LOC107743858,LOC107656339,LOC107658851,LOC107581271 other downstream 1291037 3099737 ~ 3117994 (+)
erc1b erc1,LOC107725987,LOC107656325,LOC107580227,LOC107743718 other downstream 1310815 3119515 ~ 3306758 (+)
G25514 NA other downstream 1672929 3481629 ~ 3502094 (+)
G25551 NA other downstream 1928802 3737502 ~ 3738594 (+)

Expression


Co-expression Network