LOC122343361 (LOC107725905,LOC107658738,LOC107584038)



Basic Information


Item Value
gene id LOC122343361
gene name LOC107725905,LOC107658738,LOC107584038
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1800486 ~ 1804566 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043237780.1
GGAAAACATGTCAGATGTTACAGCTTGACCATCCAGCAGAAGCCACAAGATGAAGCTAAAATGCTTTGTGTGAAAATTCAATAAACCGACAATAAACCGAGGAGTATTTCATATCCAATATCATACGAAATATCACAATATGTTGTGGTCCGTTCAACTCTTTCTGCTTTTTGGCTCCATAACTGTCACCAGTGGAATCAGATTGGTCAATGGAGACTCTTGTTCTGGACGAGTGGAGGTTCTTCATGACGGTCAGTGGGGAACCGTGTGTGATGATGACTGGGATCTAACAGACGCTGCAGTGGTGTGTAGAGAGATGGGCTGTGGGAACGCTATAGAGGCAAAGAGTGCTGCTTATTTTGGACAAGGATCAGGACCAATATTGTTAGATGATGTAAATTGCGCTGGCACTGAATCCTCACTGATGAACTGCAGGACAAATGGATGGGGCATCAATGACTGTGGACATCATGAAGATGCTGGAGTCATCTGCAACACTGTTCGGTTGGTGAATGGCATCAACTCTTGTTCTGGACGAGTGGAGGTTCTTCACAATGGAATATGGGGAACAGTGTGTGATGACGGCTGGGATCTAACAGACGCTGCAGTGGTGTGTAGAGAGACGGGCTGTGGAGATGTGATCGAGGCCAAGAGTCAAGCTTATTTTGGACCAGGATCAGGACAGATATGGATGGATGATGTACTATGTACTGGAAATGAATTTACTCTGAAAAGCTGTTCTTCAAATGCATGGGGAATACACAACTGTAACCATCAAGAAGATGCTGGAGTCATCTGTCTGACTGTCAGGTTGGTGAATGGAGATGACAAGTGTTCTGGACGAGTGGAGGTTCTCCGTGGAGATCAGTGGGGAACAGTGTGTGATGATGGCTGGGATCTAACAGACGCTGCAGTGGTGTGTAGAGAACTGGGCTGTGGGAAGGTGATCGAAGCTAAGATTGAAGCTTTTTTTGGACAAGGAACGGGACCAATGTGGATGGATGATGTAAATTGTGCTGGCACTGAATCCTCACTGATGAACTGCAGGACGAGCGGAATAAATGACTGCAGCCATTTTGAAGATGCTGGAGTCATCTGCAGCTCTGTCAGGTTAGTGAATGGCAATGACATTTGTTCTGGACGAGTGGAGGTTCTTCATAATGGAACATGGGGAACCGTGTGTGATGACGGCTGGGATCTAACAGACGCTGCAGTGGTGTGTAGAGAGACGGGATGTGGAGATGCTACAGAGGCAAAGAGCGCTGCTTATTTTGGACCAGGATCAGGACAGATATGGATGGATGATGTACAGTGTATAGGAAATGAATCCAAACTGAAAAACTGTTCTTCAAACGGATGGGGAATAAACAACTGTAGCCATCAACAAGATGCTGGAGTCACTTGTAAAAaaatcagaaaaaaaacagtcatgaGGCTTCAATTTAACATTGATCCAAAAACTGACCTAAATAGTGAAAGAAAACAGATGGAGACTTTGGAGAAGataaGAGAGGAATTAAAAGATTCTGGGACTTTTATCCTGCGATGGAAGACACAATCTAATGGAGAAGTGTTTCAGGAATTTgggaaaaagaataaaaatccTTTATATTGTAAGAAAAACCTATAAAGCCTTTGTTTGCTGCTATATATTTGGATTAATGTGTGATAGTATTACACTGATACATAAATAACTGATTTCATGTTTGACTACAAGTAAATCTGACACTGCAATTAATTGTATAAAGTGACTGATTTAAGTACAAAACATATACATTAccatttaatattcataagagTGTGAACTGCATTTTATATACTAATCTAAAAAACTAAGATGGtgacaatgttttattaaattgcatttacttCCTGTTGTTGCTGATTATagtaaaatggtaataaatgcaaaactgatgtaACGCATTTGTTAATGCaacctgtctctgtctgtgaaaacccatagatacgAAGCTGCATATCTAATGCTAATTTTCAAAGCTATCagttttcaaaatgttcatattaaaatcataacatAAAGTCATAACATAATATTCTTCAGGTAATGTTATGAAAATTccgctttattaatcaaaaccttaaacttgtgtgaaaaggaagaaaaggtgtcagagttttccTTCCTCTATGTTCGTTTGgtttgaaaactgcagtgatacgCACTCATCGGTACGCATTCTGCATCTTGCCAAAAAAGTAGTGCAAAAGAAATGCAAGGTTGTCTATTCCACCAGTGCAGCAGTCTCAGGTTTACTTACTGGCTCAAATTACTCATATAACCACATTGTTCAGCACAATGAAACATACAGTATTGTCTTCAAATGCTCATTTAGCATCTCCTTTGGCCCTAAACATGGACCGACTCTTAGGAGTCCCTAAGCACTCCAGAGAACATCCGGTCACTACACACGTGATCACAGTAAGCCTGAAGATGATGTATTCCTCATTAAAGCATCGCTTTGACATGGACACCTGGACGCAAAGCCTCCCATCTGCTGAAGAAGGACAAACCCTCGTAGTTAAGATGCAAAAACTCCTATCAGAAAGTGGCTTTAAATTGAGGCAGTGGGCCAGTAACAACTCTGGTTGGGGAATCCTGTATCTAATTTTAGTCATCTTCTCACTCTGGCTCAAGCCAAATTAATTAAAGTGCAGATGTGATCACATGGACTTGTCTTAAATATTGTCTTTAATTCGGCTAATTTACAAAGCTTCCGATTCAACATTACGGCCGTCTCCTCTTCCAGAACCTGAGTGTGTTTTTGCAGAACTGATGGCTGGTCTT

Function


NR:

description
PREDICTED: deleted in malignant brain tumors 1 protein-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043237780.1 True 2809 mRNA 0.41 8 1800486 1804566

Neighbor


gene id symbol gene type direction distance location
si:dkey-14d8.21 LOC107725922,LOC107583962 coding upstream 2594 1792307 ~ 1797892 (+)
strip2 strip2,LOC107725919,LOC107656389,LOC107658739 coding upstream 16803 1762143 ~ 1783683 (+)
ahcyl2b ahcyl2,LOC107725924,LOC107710138,LOC107583963,LOC107658882,LOC107656398,LOC107579442 coding upstream 40117 1732155 ~ 1760369 (+)
tmem209 tmem209,LOC107725925,LOC107658886,LOC107583965,LOC107656402,LOC107579462 coding upstream 68801 1726783 ~ 1731685 (+)
ccnd2b ccnd2b,LOC107725932,LOC107658897,LOC107583977,LOC107656417,LOC107710106,LOC107579638 coding upstream 74165 1717521 ~ 1726321 (+)
LOC122343360 NA coding downstream 1023 1805589 ~ 1808700 (+)
mapk11 mapk11,LOC107725929,LOC107656380,LOC107579565,LOC107583972,LOC108442323,LOC103035641 coding downstream 4726 1809292 ~ 1816478 (+)
mapk12b mapk12b,LOC107656379,LOC107710136,LOC107579544,LOC108442322,LOC103035956,LOC108279513 coding downstream 13457 1818023 ~ 1822750 (+)
LOC122342504 si:dkey-14d8.7,LOC107583991,LOC107658912,LOC107725942,LOC107656269,LOC107710135,LOC107601130,LOC107579872 coding downstream 19069 1823635 ~ 1825062 (+)
mrps18a LOC107583989,LOC107710130,LOC107656376,LOC107736677,LOC107581188 coding downstream 91595 1896161 ~ 1898257 (+)
G25030 NA non-coding upstream 11210 1788631 ~ 1789276 (+)
G25071 NA non-coding upstream 107097 1688978 ~ 1693389 (+)
G24968 LOC107583957,LOC107656385,LOC107579307,LOC107711491 non-coding upstream 242708 1556392 ~ 1557778 (+)
G24925 NA non-coding upstream 513413 1286612 ~ 1287073 (+)
LOC122342413 NA non-coding upstream 673106 1112895 ~ 1127380 (+)
G25086 NA non-coding downstream 26112 1830678 ~ 1830968 (+)
LOC122342405 NA non-coding downstream 95330 1899896 ~ 1901886 (+)
G25192 NA non-coding downstream 101264 1905830 ~ 1906106 (+)
G25193 NA non-coding downstream 102634 1907200 ~ 1908927 (+)
LOC122342875 NA non-coding downstream 224230 2028796 ~ 2033049 (+)
LOC122342451 NA other upstream 12390 1784237 ~ 1788096 (+)
LOC122343488 NA other upstream 127527 1670512 ~ 1672959 (+)
LOC122342419 coa6,LOC107726010,LOC107583951,LOC107658937 other upstream 468643 1329452 ~ 1331843 (+)
ndufa5 ndufa5,LOC107725958,LOC107658774,LOC107579922 other upstream 509262 1288297 ~ 1291224 (+)
LOC122342481 LOC107584054,LOC107658775,LOC107725972,LOC107711476,LOC107581286,LOC107656415,LOC107725915 other upstream 551317 1245578 ~ 1249169 (+)
lyrm5a LOC107725960,LOC107578730,LOC107658915,LOC107710125,LOC107583994 other downstream 189674 1994240 ~ 1995536 (+)
ninj2 ninj2,LOC107725989,LOC107584020,LOC107743858,LOC107656339,LOC107658851,LOC107581271 other downstream 1295171 3099737 ~ 3117994 (+)
erc1b erc1,LOC107725987,LOC107656325,LOC107580227,LOC107743718 other downstream 1314949 3119515 ~ 3306758 (+)
G25514 NA other downstream 1677063 3481629 ~ 3502094 (+)
G25551 NA other downstream 1932936 3737502 ~ 3738594 (+)

Expression



Co-expression Network