mapk11 (mapk11,LOC107725929,LOC107656380,LOC107579565,LOC107583972,LOC108442323,LOC103035641)


Basic Information

Item Value
gene id mapk11
gene name mapk11,LOC107725929,LOC107656380,LOC107579565,LOC107583972,LOC108442323,LOC103035641
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1809292 ~ 1816478 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237781.1
TCCTCCCATTTCTGGCAAATAGAGGGAGTAAAGCCGGCTGCCTCCACACATAAGCATATCTCTCTGGCGGATGCGTTAATGTTTTACTGACAGTTTAGTAATAAAGGGCGTCGTTTTAAACGGAAAAGATGTCGACAAGACCGGGATTCTACCGGCAAGAACTAAACAAGACTGTCTGGGAGGTGCCAGAACGATACCAGAATCTCACACCGGTTGGATCGGGGGCATATGGCTCAGTGTGCTCGGCATATGATGTGCGCCTCCGGCAGAAAGTGGCCGTCAAGAAGCTCTCCAGGCCTTTCCAGTCCCTCATTCACAGCAGAAGAACATACAGAGAACTGAGACTCCTCAAACACATGAAACATGAGAATGTTATTGGACTGCTGGATGTTTTTACTCCGGCAGCTTCTCTAGAAGAATTCAATGAGGTaTATCTTGTGACCAACCTGATGGGAGCGGATCTCAACAACATTGTCAAATTTCAGAGACTTTCAGATGAACATGTACAATTCCTCATTTATCAGCTTCTCCGGGGCCTTAAGTACATCCATTCAGCTGGGCTGATCCACAGAGACTTAAAGCCGAGCAATGTAGCGGTGAATGAAGATTGTGAACTCAGGATCCTGGATTTTGGATTagccagacagacagatgatgaGATGACTGGTTATGTGGCGACTCGTTGGTACCGAGCACCTGAGATTATGCTCAACTGGATGCATTACAACCAAACAGTGGATATCTGGTCTGTTGGATGCATCATGGGTGAACTTCTAAAGGGAAAGGTTTTGTTTCCTGGCAACGATTATATAGATCAGCTCAAGAGAATCATGGAGGTTGTAGGCACTCCTACGGCTGACGTTTTAAAGAAGATATCCTCTGAACATGCTCAGAAGTACATCCAGTCTCTTCCACACATGCCTCAGCAGGACCTGGCGAAGATATTTAGAGGAGCAAATCCTCTGGCGGTtgatctgttaaaaaaaatgctggtgtTAGACTGTGACGGGAGGATTTCAGCCAGTGAAGCTCTGTGCCATCCGTACTTTTCCCAATACCATGATCCAGAAGATGAACCCGAGGCGCCTCCATATGATCAGACCCCTGAGAGCAAAGATCGCACACTGGAGGAGTGGAAGGAGCTGGTGTTTGAGGAAGTGAGCAATTTTAAAGATCCACCCAGTAAACCTGAAAGTCTTCAGGTTGAACAATAAAACCGAGCGTAACTACAATCCAGGAAGATGCTGCCCCTCACCACAGTCTGTCTCTCAAACGTATGAACTACAGGACTGGTGGACAAACAGTATATGGACACCTTGCAGTCCAACAAGAGACAATGATTATGTATTTCCAAGGCATGATGCCCTAcctgtatgtgggtgtgtgttcaTACACACTTAATTAAGAGCGAAACACGACCGGGATTGTTTGAACATAGacacaaatgtattaatattacaagGTGCATGTTGAGTGTATGTGTGCAGAGTTGtgtgttttgactgtttttttatatttgatgtgAGACAGGCGTCTATGGGTGAAGCAGGGTATGGTGTCTTTCATATgagaccaaaacaaacaaagcaggagtaggagaaaaatatgtttacaatgTTGGATGGAGTGGGATGCGTGTCTTAAAAAGTTCATATATGCATCAATGTACAAAAGTGTCTGCATAAAACTAAATCGGTTACATAA

Function

symbol description
mapk11 Predicted to enable MAP kinase activity. Predicted to be involved in intracellular signal transduction. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and nucleus. Is expressed in granule cell. Orthologous to human MAPK11 (mitogen-activated protein kinase 11).

NR:

description
PREDICTED: mitogen-activated protein kinase 11

GO:

id name namespace
GO:0000165 MAPK cascade biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004707 MAP kinase activity molecular_function

KEGG:

id description
K04441 P38; p38 MAP kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237781.1 True 1704 mRNA 0.45 12 1809292 1816478

Neighbor

gene id symbol gene type direction distance location
LOC122343360 NA coding upstream 592 1805589 ~ 1808700 (+)
LOC122343361 LOC107725905,LOC107658738,LOC107584038 coding upstream 4726 1800486 ~ 1804566 (+)
si:dkey-14d8.21 LOC107725922,LOC107583962 coding upstream 11400 1792307 ~ 1797892 (+)
strip2 strip2,LOC107725919,LOC107656389,LOC107658739 coding upstream 25609 1762143 ~ 1783683 (+)
ahcyl2b ahcyl2,LOC107725924,LOC107710138,LOC107583963,LOC107658882,LOC107656398,LOC107579442 coding upstream 48923 1732155 ~ 1760369 (+)
mapk12b mapk12b,LOC107656379,LOC107710136,LOC107579544,LOC108442322,LOC103035956,LOC108279513 coding downstream 1545 1818023 ~ 1822750 (+)
LOC122342504 si:dkey-14d8.7,LOC107583991,LOC107658912,LOC107725942,LOC107656269,LOC107710135,LOC107601130,LOC107579872 coding downstream 7157 1823635 ~ 1825062 (+)
mrps18a LOC107583989,LOC107710130,LOC107656376,LOC107736677,LOC107581188 coding downstream 79683 1896161 ~ 1898257 (+)
pou3f2a pou3f2a,LOC107726028,LOC107583975,LOC107656268,LOC107579586,LOC107710088,LOC107658894 coding downstream 124264 1940742 ~ 1945597 (+)
ngs LOC107583969,LOC107725974,LOC107658888,LOC107579501,LOC107656267,LOC107710103 coding downstream 144384 1960862 ~ 1965535 (+)
G25030 NA non-coding upstream 20016 1788631 ~ 1789276 (+)
G25071 NA non-coding upstream 115903 1688978 ~ 1693389 (+)
G24968 LOC107583957,LOC107656385,LOC107579307,LOC107711491 non-coding upstream 251514 1556392 ~ 1557778 (+)
G24925 NA non-coding upstream 522219 1286612 ~ 1287073 (+)
LOC122342413 NA non-coding upstream 681912 1112895 ~ 1127380 (+)
G25086 NA non-coding downstream 14200 1830678 ~ 1830968 (+)
LOC122342405 NA non-coding downstream 83418 1899896 ~ 1901886 (+)
G25192 NA non-coding downstream 89352 1905830 ~ 1906106 (+)
G25193 NA non-coding downstream 90722 1907200 ~ 1908927 (+)
LOC122342875 NA non-coding downstream 212318 2028796 ~ 2033049 (+)
LOC122342451 NA other upstream 21196 1784237 ~ 1788096 (+)
LOC122343488 NA other upstream 136333 1670512 ~ 1672959 (+)
LOC122342419 coa6,LOC107726010,LOC107583951,LOC107658937 other upstream 477449 1329452 ~ 1331843 (+)
ndufa5 ndufa5,LOC107725958,LOC107658774,LOC107579922 other upstream 518068 1288297 ~ 1291224 (+)
LOC122342481 LOC107584054,LOC107658775,LOC107725972,LOC107711476,LOC107581286,LOC107656415,LOC107725915 other upstream 560123 1245578 ~ 1249169 (+)
lyrm5a LOC107725960,LOC107578730,LOC107658915,LOC107710125,LOC107583994 other downstream 177762 1994240 ~ 1995536 (+)
ninj2 ninj2,LOC107725989,LOC107584020,LOC107743858,LOC107656339,LOC107658851,LOC107581271 other downstream 1283259 3099737 ~ 3117994 (+)
erc1b erc1,LOC107725987,LOC107656325,LOC107580227,LOC107743718 other downstream 1303037 3119515 ~ 3306758 (+)
G25514 NA other downstream 1665151 3481629 ~ 3502094 (+)
G25551 NA other downstream 1921024 3737502 ~ 3738594 (+)

Expression


Co-expression Network