creld2 (LOC107730684,LOC107699369,LOC107601011)


Basic Information

Item Value
gene id creld2
gene name LOC107730684,LOC107699369,LOC107601011
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 15149133 ~ 15157634 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237805.1
ATGGGCTGACGCGGAAATCTGAATGTCCAGCTGGTTAGAAGGCGGCATGGAAATTTCTGAAAATGACAATCTATATGTCTTTATAATAAACGTGTAATAATTTCGGACACTAGATGTTGATGCAGGGGATCTTAACTGGGTGGAGACAACCtagaaaacagtgtttttttattggaCAACCTTTGAGCTAGACAAGAAAGCATGTTACGATCATATAGTATTTTTCGCTTGagtgttgttattttgtttctagCACTTGGATCTTTGCATGCCAAGGACTTTAAGTCATTATGTTCAACATGCAGACAATTAGTCGACAATTTTGACAagGGTCTGGATAAAACGGCAAAGCAAAATTTTGGTGGTGGAAACACAGAATGGGAAGAGCGAAAACTCTCCAAATATGTGTTGAGTGAGATTAGGTTGACGGAGATACTGGAGAGTTTGTGTGACAGCAGCAGTTTTGAGTGTAACCACATGTTGGAAGAAAATGAAGAACACTTTGAGACATGGTGGTTCAAGAGgaaaaCAAAACACCCCGATCTATTCAAATGGTTTTGTATAGAGACCATTAAAATGTGCTGCCCAAAAGGCTTATTTGGTCCTGACTGCAACACTTGCATTGGAGGTGCTGACAAACCATGCCATGGTAACGGCAAATGTGATGGAGATGGAACAAGGGCTGGAAATGGAAAGTGCAGTTGTGATAAGGGATATAAAGGGGAGTTATGTCTGGACTGCAGTGATGGTTATTTTAGTGCACTGAGGAATGATACATTCTCCTTGTGCAAAGagTGTCATGAGTCTTGTGTTGACTGCATCGGAGGAACCAATCACGATTGTAAAGAATGTAGGAATGGCTGGGAGAAAGACCAAGAAGGAGCATGCATTGacaTCAATGAATGCACCAAAGATCCAGCTCAATGCAAAGATAACCAATACTGCCTAAACACGGATGGATCTTTCTTCTGTAAAGAATGTGATATAAGATGCTCTGGTTGTAAAGGACCTGGATCAAGTAACTGTCTCACTTGTGCTGATGGCTATAAGGATGAAGAAGGCACATGTACAGACACTAATGAATGCACTGAAGATCCAGATCTGTGCAAAGAAAACCAATACTGCCTAAATACAGATGGTTCTTTCATATGTAaagaatgCAATACCGGATGCTTTGGTTGCAAAGGACCTGGTGCCAACAACTGCTTGAACTGTGCTGATGGTTATAAGGATGAAGAAGGCACTTGCACAGAAGAGAATAAGGAAGTGCCTGACTTTGATTCTGAAGGTTCGCAAACTGGTGACTCACCCAAAAAACATGAGGACCTCTGAAGTCATAATGCTTGAATGCAGAAAACACCCTCCAGGACACAATATTTGCCTATGGACCACTAGTGTCTGCAGTGTTTAAATACGGGTTGTTCTTCTGGAATAATCAAGAGTTAAAGGCACTTGCAGCAAATACTTAAACAGCACTATTTAATTTGTGGAACATGTTTTTGCAGTAGACGTGGTCAGCACCACATTCCCTGTGAGCAAGATTTACTTAAGATACATTAActgctggtttttttttttttttttgtacttgtatGCCCCCTCTCAATTTTTGTTGacttgttaattaaaatgtttttaaaaattcaatcaactgtttgtttgtttgtttgttttttttaagtttagaaACTGTTTGGATAATTTTGCTGTAGCTGAAAGAGTCAAAACCACAAATATAATTAAGCTGTTTCTTTGACAACTTTAGTTCTCCAATGCAAGGTCTATCCTCTTTCCTACACACAATGTCATTTGTATGGCATAGATTATGGGAGAACCTtccatttaaatatgattatcaACAACTGCCAATTAGTCATAATGAAACAGTAGtaaatcttttcttttgtattgtgtacaTTTGAGTGCAAACATTCTGGCCAGTCCACACctgtgtttattaatttgttcgttcattcattctatACTTTGTTATATGGAGTAATacatgttttgttatattttgtgcaACCACGTATATCATGCTAtcctaaaaaagtaaaaataaaaaatacaagcCTTGA

Function

NR:

description
cysteine-rich with EGF-like domain protein 2 isoform X2

GO:

id name namespace
GO:0005783 endoplasmic reticulum cellular_component
GO:0005576 extracellular region cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K24335 CRELD; protein disulfide-isomerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237805.1 True 2081 mRNA 0.38 11 15149133 15157634

Neighbor

gene id symbol gene type direction distance location
LOC122342621 zbed4,LOC107744591,LOC107663563,LOC107563622 coding upstream 5722 15136921 ~ 15143411 (+)
LOC122342863 cpne8,LOC107569221,LOC107666208,LOC108279828,LOC101886030,LOC108427072,LOC108244036 coding upstream 341767 14784476 ~ 14807366 (+)
LOC122342644 tbc1d22a,LOC107721154,LOC107689730 coding upstream 387161 14758492 ~ 14761972 (+)
LOC122342641 tbc1d22a,LOC107689730 coding upstream 394776 14725899 ~ 14754357 (+)
gramd4a gramd4,gramd4a,LOC107721158,LOC107689728,LOC107710742 coding upstream 1033825 14074263 ~ 14115308 (+)
LOC122343379 ppm1j,LOC107668166,LOC107708158 coding downstream 184628 15342262 ~ 15355555 (+)
nup50 nup50,LOC107699201,LOC107562145,LOC107687567,LOC107601009,LOC107719874 coding downstream 438027 15595661 ~ 15602006 (+)
LOC122342219 LOC107554691,LOC107656224 coding downstream 480878 15638512 ~ 15644874 (+)
LOC122342595 NA coding downstream 1216942 16374576 ~ 16377941 (+)
LOC122342597 rab3ip,LOC107709967,LOC107689177,LOC107757202,LOC107675141,LOC107554773 coding downstream 1220999 16378633 ~ 16398499 (+)
G28745 NA non-coding upstream 34605 15114111 ~ 15114528 (+)
LOC122342648 NA non-coding upstream 285033 14863033 ~ 14864100 (+)
G28726 NA non-coding upstream 294382 14834630 ~ 14854751 (+)
G28667 NA non-coding upstream 339472 14808597 ~ 14809661 (+)
G28503 NA non-coding upstream 1156302 13992023 ~ 13992831 (+)
LOC122343380 LOC107699369,LOC107730684,LOC107601011 non-coding downstream 181984 15339618 ~ 15341504 (+)
G28797 NA non-coding downstream 216476 15374110 ~ 15374537 (+)
G28813 NA non-coding downstream 330442 15488076 ~ 15492182 (+)
G28882 NA non-coding downstream 567558 15725192 ~ 15725554 (+)
G28888 NA non-coding downstream 579834 15737468 ~ 15737762 (+)
tafa5a fam19a5a,fam19a5,LOC107552289,LOC107689731,LOC107563619,LOC107721159,LOC106609108,LOC103356475 other upstream 666312 14400029 ~ 14482821 (+)
tbc1d22a tbc1d22a,LOC107689730,LOC107710738 other upstream 854515 14177430 ~ 14294618 (+)
trmu trmu other upstream 1157361 13985517 ~ 13991772 (+)
LOC122342701 im:7143923,cpne8,LOC101886030,LOC107566841,LOC108279828,LOC107689738,LOC108427072,LOC103365370,LOC107666208,LOC102193326,LOC102297242 other upstream 1188035 13882894 ~ 13961098 (+)
vezt vezt,LOC107689227,LOC107667718,LOC107597031,LOC107755144 other upstream 1715527 13405929 ~ 13433606 (+)
LOC122343376 LOC107699368,LOC107601007,LOC107733210,LOC105896948,LOC104933464 other downstream 121 15157755 ~ 15214432 (+)
LOC122342869 NA other downstream 255513 15413147 ~ 15420303 (+)
G28806 LOC107744205,LOC107601002,LOC107687568,LOC107699198 other downstream 281700 15439334 ~ 15555682 (+)
cdkn1d LOC107699204,LOC107719868,LOC107562144,LOC107601015,LOC107758204,LOC107687563 other downstream 407865 15565499 ~ 15655278 (+)
G28891 NA other downstream 683738 15841372 ~ 15841855 (+)

Expression


Co-expression Network