frs2a (frs2,frs2a,LOC107658966,LOC107590545,LOC107729158)


Basic Information

Item Value
gene id frs2a
gene name frs2,frs2a,LOC107658966,LOC107590545,LOC107729158
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 90208 ~ 107305 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237828.1
TTTGCCCGCCGTTCTCCCCGACTATTGGACTGCGAAACATGGATAGATGGAaaagtttgactgtttttggtgtgtgtgagggagttCGATACGAGCGATGAGTCCCGTGAAGAGATTTCACAGATCTGACTGGAAAAACACTCATTTACTGCGCTCATCTGCACTGTTAACCACTTATTAAACTCAGCCAGTGGAGATATGACTATTGAAGTGGCTCCGTGCCGCGCCGGAGGTGTGATGTTGGTCCGTGACGCCGGTGTGTGTGGACACGAGCACAATCATTGATGGCTGGATGTAGgggTCCGATGGTGTGTTAAAGGCGCCATGGGGAGCTGCTGTAGCTGTCCCGATAAAGAGATCATACCTGACAATCATCACAACAAATTCAAGGTGATAAACGTGGATGATGACGGTAATGAGCTGGGCTCAGGTGTGATGGAGCTGACGGAGGAAGAGCTGATTTTGCACACGCGTAAACGAGACGCTGTAAAGTGGCCCTACCTCTGCCTGCGTCGCTATGGCTACGACTCCAACCTCTTCTCCTTCGAGAGCGGCCGGCGCTGTCAAACCGGTCAAGGGATATTTGCGTTCAAGTGTGCACGGGCCGAGGAGATCTTTAACATGCTGCAGGACATCATGCACAACAACAGCATCAGCGTGGTGGAGGAGCCGGTGCTGGAGCCCGAGCTTCCAGTGACGCCTCACACTCCCACCACTCCCGGTTACTCCGTCCCGACGGTAGCCAATGGGATTGGCCGCTACCCTTCATTCGGCGACGCCTCCTCGCGGCCGTCCAGCCGTCACCCTTCGGTGGGCAGCACCCGTTTACCCTCAGTAGGGGAGGAGTCCACACACCCACTGCTGCTCAACGACGAGACCGTACACACTTATGTCAACACCACGGGTCTGCAAGAAGAGCGGCGCTCTCGCAGCACTGGCCACGCCCCTCTAGAGCTCCGGACCTCCAATCCAGAGAGCGCAGCCCCAGCCTCGCCCAATGAGCTGGAGCCCAGCGTGCTTCTGGAGCCGGAGGCCGTCAAGTTTGTTTTGGGCCCCACGCCGGtccagagacagagacagcgAGATCTGGGCGAGCCGGACACGGCGGTGGGCTCAAACACTGACGCCGCTTCTCCAGTAAAGACTGTAAACGGCGGCACGGACTGCGACACGGGCTACGACAGCGACGAGCGCAAAGAGACGCCGCACGAGACTCTTAACGGCGGGTCCGGAGCGAGGCGCATCAGACCACCCGTTCCTCTCCCAGACGCCCACAACGCTAACAACTCAGCCCAGCGGCGCCCGGCGCTGCTCAACTACGAGAACCTGCCGGCGCTGCCGCCCGTCTGGGAGACCCGCAAACCCAGCAGCGAGGCGGAGGACGAGGACGGACTCAAATCTCCGTCTCTGAACGGCTTCCACTCGTTCGATCACAATTACGTGAACACGGAGAACGTGACGGTGCCGCTCAGCGCACACAAACTCCACAGCGCTCAGCCCAGCGTCTTCAGCTTCGACCTCCGCCGGCTCGGACAGCTCAACTACATCGAGGTGGAGATGGACAAGGTGTCGGACTCCAGCGGGCCGCACACCCCCAAGACGCCCACCACGCCGCTGCCGCCCACCCCCACGCGCCGGACGGAGCTGTACGCCGTCATCGACATCGAGCGCACCGCCGCTATGTCCAGCCTGCAGAAAGCCCAGCCGCGGGACGATGGCACGTCCAGAAAAACACGACACAACAGCACCGACCTGCCCATGTGACCCAGCGGCTGAGCTCCACAAAACACGAGGTCTAGGTCACGTTTCACTACTAAACACCTCGATCATCAGATCCCCCGCTTTATACATGCAAACTCTAAATAATtaagctgcattcatttgaacaaaaatgaaatattattacaattttaaaaaagtaattgattaaataattaattgatggattttcagcatcattactccagtcttcagtgtcacatgatccttcagaaatcaatcccTCAGCTATTATCAGTCAGTATTGGCGCTCAGCTATCagtttatataattatcaatGTTCGACAAACaatttttgctgcttaaaacGTGAAAACCatgatgcatttctttttttgcaattcttAGAAGAatagaaagttgaaaaaaagtgcatttatttgaaacagaagttttcatcaatttaatttaccattgtgaaataaaagcattattattattaatagtagtagtattttttaGTGACTACAAACTTCTAAATGGAAATATGTCAGtttctgcaaataaatattgagCAGACAAACTGTTAAGACTGATAATAAAGGATCACgtgaccctgaagactggagtaatgatgataaATTCAGCTGCGCATCACAGGAACGAAATACTTTTGACCATATATCTGAATATCAAATAGTTATTTCAATAAGTAATGATGTTTCAAAATGGCACTGtgcttactgtatttttaatcaatgaaatgcagccttgatgagcagaagaggctTCATCGAAAACAAGTTCTTCAAACACTTAAGAAGCTTCagtttcatataaatatatttgatttggggtgaaatatgacctagaagtgaaatgttttgtgagatttgttcatatatatatatatatatatatatatatatatatatagtactttaCAAGTGCACTGATCTGCATTGATTCACTCAACACACGCAGGTCTGAAGCGGTCAAACAGGTACAGATGAGTTCAGCAGACCTCATTCACAATGCTGTGATCTTTTACTCTCTATTTCACAAGTACAGAAGTGGTGGAGATTCTCGTGGTTGATGTAAGTCACTCATTTTGCACTTGAGAGCAATAAAAGATGCTCACTACGGTATTCTAGAGTCACTTTAAACGGCCGCTCTCCGTCCTCAGCCCTTCTGTTAGCGTCGGGTGCTCTCACAGGGAAATATAATCACAGTCTTAAAAAGATTGCAGCCtacactgttttaaaaaatatctttgcaTAAAAGTTTGCAAACTATAGTGTTATTACACATGAAAGAATTCAAATGTTACTTCAATTTGAGGTTCCTTGTATAAAAGtcagaaataaaagtttctttttatgtaaaattcccagatttttatacaaatatcaatattaatttGGCATTTCTTTTCTGGGTTATTTTGTGACGGATGCAGAGAAATCACAAGCTCCAATATTCTTTCTTTTACAACTTAAAGCAGCgtatatatattgataatattgAAGCTCATGAGTGCTTTCAGAAGGAGCTGGAGGACGTGTGCGGTGCTGTAAATGTGATTGTCTCGCTCGTCTGCGCGCTCCCATCTTTCCAAACAAGCAGACGCACCGATCTAGACAGCCGCTTTATGTAAAGTTTCTATTGTAAAGTTTATTGTATGCTTGAGTTGCATTATTATCACGTTATTTTCTACCTTTTTGAGAGAGTGTGCAAATATAGGAACGTTCACATGTACAAAACGACACTTAGTAGTTTtagaaacaaatgaaatgagTGTAAAAATCAAGATCATTTGCCAAATCTGAGGAACGGAATGATTGTTGGGATCTtttaggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcggttaCATTCCTTTGCGAGTATTTCACAATTATGGACATCGTACTGAAACTAGTTTTGATATTGCATTTGATATATTGGGTATTGATATCAGTTtagtaaaatgtttgtatttaaaaaaaaaaaaaaaaaaaaaaaagacagaatattgtgtattttgtgatATGTACACCATTACATCCCTGCCATCGGTGCCAACTCTATTTTTGTAGCAtggcaaaaaaatcattaaaaaatgaaatgaaa

Function

symbol description
frs2a Predicted to enable fibroblast growth factor receptor binding activity and transmembrane receptor protein tyrosine kinase adaptor activity. Predicted to be involved in fibroblast growth factor receptor signaling pathway. Predicted to be located in membrane. Predicted to be active in cell-cell junction and cytoplasm. Orthologous to human FRS2 (fibroblast growth factor receptor substrate 2).
frs2 Enables fibroblast growth factor receptor binding activity and neurotrophin TRKA receptor binding activity. Involved in negative regulation of cardiac muscle cell differentiation. Acts upstream of or within fibroblast growth factor receptor signaling pathway. Located in adherens junction. Biomarker of renal cell carcinoma.

NR:

description
PREDICTED: fibroblast growth factor receptor substrate 2

GO:

id name namespace
GO:0005158 insulin receptor binding molecular_function

KEGG:

id description
K12461 FRS2; fibroblast growth factor receptor substrate 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237828.1 True 3897 mRNA 0.46 7 90208 107305

Neighbor

gene id symbol gene type direction distance location
yeats4 yeats4,LOC107555875,LOC107590554,LOC106609801,LOC107717680 coding upstream 1056 87004 ~ 89152 (+)
LOC122343428 lmod2b,LOC107726005,LOC107584027,LOC107656401,LOC107581005,LOC107711505 coding upstream 72304 13818 ~ 17904 (+)
LOC122343427 asb15b,LOC107726003,LOC107658939,LOC107583946,LOC107656400,LOC107581016,LOC107711503 coding upstream 77090 9542 ~ 13118 (+)
glipr1a NA coding downstream 87787 195092 ~ 199536 (+)
LOC122343357 LOC107658963,LOC107708011,LOC107555883 coding downstream 98200 205505 ~ 213159 (+)
zdhhc17 zdhhc17,LOC107708015,LOC107658960,LOC107656450 coding downstream 236287 343592 ~ 360922 (+)
LOC122342832 NA coding downstream 753291 860596 ~ 863551 (+)
LOC122342829 LOC107705336,LOC107583937,LOC107656238 coding downstream 759891 867196 ~ 888759 (+)
G24554 LOC107729149,LOC108279496,LOC107555887,LOC107708007 non-coding upstream 3620 85235 ~ 86588 (+)
G24553 NA non-coding upstream 7685 75388 ~ 82523 (+)
G24558 wasl,LOC107583945 non-coding upstream 64312 24544 ~ 25896 (+)
G24567 NA non-coding downstream 8894 116199 ~ 116891 (+)
G24586 NA non-coding downstream 108670 215975 ~ 281984 (+)
G24587 NA non-coding downstream 135261 242566 ~ 282841 (+)
G24593 phlda1,LOC107708012,LOC107658781,LOC107656271,LOC107729151 non-coding downstream 142867 250172 ~ 252374 (+)
G24594 NA non-coding downstream 145960 253265 ~ 315566 (+)
G24555 cpsf6 other upstream 5246 83688 ~ 84962 (+)
cmah cmah,LOC107555874,LOC107729160,LOC107656456,LOC107590555 other downstream 77411 184716 ~ 194183 (+)
G24609 NA other downstream 185930 293235 ~ 295069 (+)
G24632 LOC107584022 other downstream 266222 373527 ~ 374082 (+)
gpr22a gpr22a,LOC107658958,LOC107583929,LOC107729153,LOC107708019,LOC107590528,LOC107656448 other downstream 327038 434343 ~ 439352 (+)
G24771 plekha5,LOC107584023,LOC107658747 other downstream 546787 654092 ~ 665530 (+)

Expression


Co-expression Network