asb15b (asb15b,LOC107726003,LOC107658939,LOC107583946,LOC107656400,LOC107581016,LOC107711503)


Basic Information

Item Value
gene id asb15b
gene name asb15b,LOC107726003,LOC107658939,LOC107583946,LOC107656400,LOC107581016,LOC107711503
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1278010 ~ 1281707 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237858.1
TCTGCCTAGTCATGCCAAAGTGACCCGCATTCTCCAAGTGTCGAGAGAAAGCGGGTCAGCACTAAATATATCCTCCAGACCCGTGAAAACAAACTCAGTTTGTGTTTTGCAACGCTACGAGGTGCATGGCATTTCTTTCAATGGTTCGTCAAAAACTCTTTAAAGGATTTACAGAGAAAACTAGACATTCGTGTCAGCGTCACAGTCCTGTTTTCACCTAGATCACGGTTTTGTTCACGCGTGCACCCTCTTGAGCTTTGAAACACAATGGACTACATGGAACAGATGGATGAAGATCAGCTCATTGACTTTGTGATTCAAATGAGTCTCCAAGACGCGTGCGGCCTCTCCGTTTTAAACGAGCCGCTAAGCACTTTAGAAACAGCCAGTGATGAAAACCTCAAGATTTTATCAGCCATCGATCAAGGTGATGTGTTTGCGCTGAGGCATCTGCACAAGTACAGTGACGCctataaagagagagacagcaaaGGCTGGCTTCCGATGCACAGAGCTTCAGTCCAGCCGGACGCCCATGTGTTGGACAGCGTGCTCCTAGCATCCCACGAGCTGAGCATGGAGGAGATGACGACTGACGGAGACACTGCTTTGACTCTGGCTTGCGGAGCAGGACATGTGGAGAACGTGAAGGTTCTTCTTCAGCACGGAGCATCTCCACACAACATGAACAGCAGGAATGAGAATCCACTCCTCCTGGCTGTGAGGGCAAACTCGTATGAAATGGTTCATGCCCTGGTAATGAGAGGAGCCTTCGTGCAGCAGGTGTGTTTGAAGAAGTGGACGGTCATCCACGAGGCTGCTAAAGTGGGTTGTGTGGACATCTTGATGCTGCTGCTGAGACACGGGGGGAAGGTCATGGGCCGGGACGGTCACGGGGTCACGCCGCTGGGCATCGCCGCAGAGTACGGCCATCCTGAAATACTGGCAATCCTTATCCAACATGGGGGCGATGTCACAGCACAAGCAGCGAATGGGGACAGTGTGTTATATGACGCCGCAGGCTGTGGGAACCTGGACTGCATTGGTCTACTCTTACAACACGGCGCCAGTCCTAACGTAGCCAGTCTTTGCTCTCAACTGCCCATTCACCGTGCAGCCTATGAAGGGCACTACCTGGCCCTGAAGACGTTCATACCCATCACCACTAAGAGGGCCATCCGTCTCTCTGGGATGAGTCCGGTTCATTCTGCGGCGGACGGAGGCCAGGCTGACTGCCTGGAACTGCTCATCACGAAAGGCTTTGATGTCAACCCAATCCTGGGCTGCCATATTTCCGAAAACTACGGCGATATGAGGAAGACCCCGCTGTACTTCGCCATCTGCAATGGAGACGTCACCTGCGCCGAGATGCTTCTGAAAGCAGGAGCGAAGCCCGACCTGGACCCGCTGCGCTGCCTCCTGGTGGCCGTCAGGGCTGGGAAGTACGAGCTGGTCCGGCTGCTTCTCGCCTACGGAGCGGACGTCAACTGCGTCTTCTCCGTCGTCAGTGACACCTTGTTTCCTACGGCACTGCAGTACTGCCTCAAAGATGAAATGATGCTGCGCCTGCTCCTTAACAACGGTTACCATGCAGAAAGCTGCTTCGAGTGTTACCACGACAACTGCGTAACGTCATACACGTGGGTAGAGGCTTCTAGTCGGTCGTACCAAATCAAGACCGCAACGAATAAAGTAACCTTTTGTGAGTTTATTAGCGTGTCATGGATGGCACACTTGGCGGGGCGGGTGGTTCTGACACTCTTAGATTACGTGAACAACGTGCGCATCTGCTCTAAACTGCAACGCATTCTGGAGAGACAGGAGGAGTGGCTCGATATCTGTGACGTCCTTAGGAACCCACGCTCTTTGAAGCACCAGGCCAGGTTGGTTATCAGGGGATGTATGACACTGAGAAGACTGAATGACCCAGAGATCATGAGCACCGTTCCTTTCCCCCCAGCACTGAAGAACTTCCTGCTTTACAAAGAATATGATATATATGGTCGAATGGATGAACAGtagatatatgttttttattgcaaCTTATTTATGAGTGAAACTATTTGTAATTTTGagataatttaaatatgttttataaacaagATGTTAAAGATGTGCTGCATAAAGATGcgtttattaacaataatacatGATGCATACTTTTCATATAGTAATGCTCACAAAATAAATCATCACCAAGCCCAGGCCacatttcacccaaaaacaataaaaaaaaaaaccaaaaaaaatatgcaCCTTTTTGATTTTAGAGTGAAACTTGACCTGGACATGGTCTTGACAGGGTTCCCAAAAACTAAATAGTCTGGATATGctacataaatacatgatttACTCTGGAAA

Function

symbol description
asb15b Predicted to be involved in protein ubiquitination. Predicted to act upstream of or within intracellular signal transduction. Orthologous to human ASB15 (ankyrin repeat and SOCS box containing 15).

NR:

description
PREDICTED: ankyrin repeat and SOCS box protein 15-like

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0016567 protein ubiquitination biological_process

KEGG:

id description
K10337 ASB15; ankyrin repeat and SOCS box protein 15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237858.1 True 2361 mRNA 0.49 9 1278010 1281707

Neighbor

gene id symbol gene type direction distance location
lmod2b lmod2b,LOC107726005,LOC107584027,LOC107656401,LOC107581005,LOC107711505 coding downstream 619 1273306 ~ 1277391 (-)
LOC122342412 NA coding downstream 152886 1122667 ~ 1125124 (-)
LOC122342410 NA coding downstream 157352 1115391 ~ 1120658 (-)
plekha5 plekha5,LOC107656381,LOC107718544,LOC107590532,LOC107658747,LOC107707963,LOC107584023,LOC106609184 coding downstream 503449 643448 ~ 774561 (-)
aebp2 aebp2,LOC107708024,LOC107658952 coding downstream 637285 629065 ~ 640725 (-)
slc13a4 slc13a4,LOC107579393,LOC107656439,LOC107658938,LOC107584028 coding upstream 49315 1331022 ~ 1344030 (-)
gnsa gns,gnsa,LOC107658926,LOC107656403 coding upstream 186490 1468197 ~ 1473225 (-)
ano2b LOC107658923,LOC107726040,LOC107583957,LOC107579307,LOC107656385,LOC107711491 coding upstream 249085 1530792 ~ 1562547 (-)
LOC122342888 LOC107584032,LOC107579834,LOC107656234,LOC107711464,LOC107725908 coding upstream 306572 1588279 ~ 1591305 (-)
LOC122342889 NA coding upstream 309682 1591389 ~ 1593369 (-)
G24917 NA non-coding downstream 25431 1250932 ~ 1252579 (-)
LOC122343365 NA non-coding downstream 145975 1130346 ~ 1132035 (-)
G24874 NA non-coding downstream 209111 1068340 ~ 1068899 (-)
G24870 NA non-coding downstream 308659 968474 ~ 969351 (-)
G24863 NA non-coding downstream 320661 953465 ~ 957349 (-)
G24924 NA non-coding upstream 3498 1285205 ~ 1285466 (-)
G24926 NA non-coding upstream 4852 1286559 ~ 1287065 (-)
G24927 NA non-coding upstream 5549 1287256 ~ 1287737 (-)
LOC122342498 si:ch211-258f14.2,LOC107658934,LOC107583952,LOC107726068 non-coding upstream 78329 1360036 ~ 1361863 (-)
G24982 LOC107658928,LOC107726042,LOC107711495,LOC107656419 non-coding upstream 79254 1360961 ~ 1429434 (-)
G24875 NA other downstream 207914 1069160 ~ 1070096 (-)
pik3cg pik3cg,LOC107658948,LOC107656384,LOC107583938,LOC107705338,LOC107590535,LOC107584052 other downstream 344902 864684 ~ 933108 (-)
slco1c1 slco1c1,LOC107708018,LOC107583931,LOC107658953,LOC107729145,LOC107656392,LOC107590530,LOC108435080 other downstream 781142 406642 ~ 496868 (-)
osbpl8 osbpl8,LOC107555879,LOC107656451 other downstream 936057 279998 ~ 341953 (-)
G24708 NA other downstream 1086768 186460 ~ 191242 (-)
ptprz1b ptprz1,ptprz1b,LOC107725913,LOC107656236,LOC107658935,LOC107581028 other upstream 7607 1289314 ~ 1323397 (-)
LOC122342802 LOC107711465,LOC107656235 other upstream 298773 1580480 ~ 1586189 (-)
selenoo2 selenoo,si:dkey-14d8.2,LOC107579362,LOC107711485 other upstream 312577 1594284 ~ 1604690 (-)
zgc:113263 LOC107658878,LOC107583959,LOC107725918,LOC107656382,LOC107711463 other upstream 327653 1609360 ~ 1618298 (-)
ccdc167 ccdc167 other upstream 371884 1653591 ~ 1654826 (-)

Expression


Co-expression Network