LOC122343427 (asb15b,LOC107726003,LOC107658939,LOC107583946,LOC107656400,LOC107581016,LOC107711503)


Basic Information

Item Value
gene id LOC122343427
gene name asb15b,LOC107726003,LOC107658939,LOC107583946,LOC107656400,LOC107581016,LOC107711503
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 9542 ~ 13118 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237890.1
CTTCTGCCTAGTCATGCCAAAGTGACCCGCATTCTCCAAGTGTCGAGAGAAAGCGGGTCAGCACTAAATATATCCTCCAGACCCGTGAAAACAAACTCAGTTTGTGTTTTGCAACGCTACGAGGTGCATGGCATTTCTTTCAATGGTTCGTCAAAAACTCTTTAAAGGATTTACAGAGAAAACTAGACATTCGTGTCAGCGTCACAGTCCTGTTTTCACCTAGATCACGGTTTTGTTCACGCGTGCACCCTCTTGAGCTTTGAAACACAATGGACTACATGGAACAGATGGATGAAGATCAGCTCATTGACTTTGTGATTCAAATGAGTCTCCAAGACGCGTGCGGCCTCTCCGTTTTAAACGAGCCGCTAAGCACTTTAGAAACAGCCAGTGATGAAAACCTCAAGATTTTATCAGCCATCGATCAAGGTGATGTGTTTGCGCTGAGGCATCTGCACAAGTACAGTGACGCctataaagagagagacagcaaaGGCTGGCTTCCGATGCACAGAGCTTCAGTCCAGCCGGACGCCCATGTGTTGGACAGCGTGCTCCTAGCATCCCACGAGCTGAGCATGGAGGAGATGACGACTGACGGAGACACTGCTTTGACTCTGGCTTGCGGAGCAGGACATGTGGAGAACGTGAAGGTTCTTCTTCAGCACGGAGCATCTCCACACAACATGAACAGCAGGAATGAGAATCCACTCCTCCTGGCTGTGAGGGCAAACTCGTATGAAATGGTTCATGCCCTGGTAATGAGAGGAGCCTTCGTGCAGCAGGTGTGTTTGAAGAAGTGGACGGTCATCCACGAGGCTGCTAAAGTGGGTTGTGTGGACATCTTGATGCTGCTGCTGAGACACGGGGGGAAGGTCATGGGCCGGGACGGTCACGGGGTCACGCCGCTGGGCATCGCCGCAGAGTACGGCCATCCTGAAATACTGGCAATCCTTATCCAACATGGGGGCGATGTCACAGCACAAGCAGCGAATGGGGACAGTGTGTTATATGACGCCGCAGGCTGTGGGAACCTGGACTGCATTGGTCTACTCTTACAACACGGCGCCAGTCCTAACGTAGCCAGTCTTTGCTCTCAACTGCCCATTCACCGTGCAGCCTATGAAGGGCACTACCTGGCCCTGAAGACGTTCATACCCATCACCACTAAGAGGGCCATCCGTCTCTCTGGGATGAGTCCGGTTCATTCTGCGGCGGACGGAGGCCAGGCTGACTGCCTGGAACTGCTCATCACGAAAGGCTTTGATGTCAACCCAATCCTGGGCTGCCATATTTCCGAAAACTACGGCGATATGAGGAAGACCCCGCTGTACTTCGCCATCTGCAATGGAGACGTCACCTGCGCCGAGATGCTTCTGAAAGCAGGAGCGAAGCCCGACCTGGACCCGCTGCGCTGCCTCCTGGTGGCCGTCAGGGCTGGGAAGTACGAGCTGGTCCGGCTGCTTCTCGCCTACGGAGCGGACGTCAACTGCGTCTTCTCCGTCGTCAGTGACACCTTGTTTCCTACGGCACTGCAGTACTGCCTCAAAGATGAAATGATGCTGCGCCTGCTCCTTAACAACGGTTACCATGCAGAAAGCTGCTTCGAGTGTTACCACGACAACTGCGTAACGTCATACACGTGGGTAGAGGCTTCTAGTCGGTCGTACCAAATCAAGACCGCAACGAATAAAGTAACCTTTTGTGAGTTTATTAGCGTGTCATGGATGGCACACTTGGCGGGGCGGGTGGTTCTGACACTCTTAGATTACGTGAACAACGTGCGCATCTGCTCTAAACTGCAACGCATTCTGGAGAGACAGGAGGAGTGGCTCGATATCTGTGACGTCCTTAGGAACCCACGCTCTTTGAAGCACCAGGCCAGGTTGGTTATCAGGGGATGTATGACACTGAGAAGACTGAATGACCCAGAGATCATGAGCACCGTTCCTTTCCCCCCAGCACTGAAGAACTTCCTGCTTTACAAAGAATATGATATATATGGTCGAATGGATGAACAGtagatatatgttttttattgcaaCTTATTTATGAGTGAAACTATTTGTAATTTTGagataatttaaatatgttttataaacaagATGTTAAAGATGTGCTGCATAAAGATGcgtttattaacaataatacatGATGCATACTTTTCATATAGTAATGCTCACAAAATAAATCATCACCAAGCCCAGGCCacatttcacccaaaaacaataaaaaaaaaa

Function

symbol description
asb15b Predicted to be involved in protein ubiquitination. Predicted to act upstream of or within intracellular signal transduction. Orthologous to human ASB15 (ankyrin repeat and SOCS box containing 15).

NR:

description
PREDICTED: ankyrin repeat and SOCS box protein 15-like

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0016567 protein ubiquitination biological_process

KEGG:

id description
K10337 ASB15; ankyrin repeat and SOCS box protein 15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237890.1 True 2240 mRNA 0.50 9 9542 13118

Neighbor

gene id symbol gene type direction distance location
LOC122343428 lmod2b,LOC107726005,LOC107584027,LOC107656401,LOC107581005,LOC107711505 coding downstream 700 13818 ~ 17904 (+)
yeats4 yeats4,LOC107555875,LOC107590554,LOC106609801,LOC107717680 coding downstream 73886 87004 ~ 89152 (+)
frs2a frs2,frs2a,LOC107658966,LOC107590545,LOC107729158 coding downstream 77090 90208 ~ 107305 (+)
glipr1a NA coding downstream 181974 195092 ~ 199536 (+)
LOC122343357 LOC107658963,LOC107708011,LOC107555883 coding downstream 192387 205505 ~ 213159 (+)
G24558 wasl,LOC107583945 non-coding downstream 11426 24544 ~ 25896 (+)
G24553 NA non-coding downstream 62270 75388 ~ 82523 (+)
G24554 LOC107729149,LOC108279496,LOC107555887,LOC107708007 non-coding downstream 72117 85235 ~ 86588 (+)
G24567 NA non-coding downstream 103081 116199 ~ 116891 (+)
G24586 NA non-coding downstream 202857 215975 ~ 281984 (+)
G24555 cpsf6 other downstream 70570 83688 ~ 84962 (+)
cmah cmah,LOC107555874,LOC107729160,LOC107656456,LOC107590555 other downstream 171598 184716 ~ 194183 (+)
G24609 NA other downstream 280117 293235 ~ 295069 (+)
G24632 LOC107584022 other downstream 360409 373527 ~ 374082 (+)
gpr22a gpr22a,LOC107658958,LOC107583929,LOC107729153,LOC107708019,LOC107590528,LOC107656448 other downstream 421225 434343 ~ 439352 (+)

Expression


Co-expression Network