CI01000004_10757852_10760211


Basic Information

Item Value
gene id CI01000004_10757852_10760211
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 10757543 ~ 10761142 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_10757852_10760211.mRNA
ACAATTATACTATTTTATCGTAATCGTAAACGCAGTCGGTTTCAAACGTGAAAGGCGTTTCTCTGATCTGAAACTAGTCTTTAACTTTTAACTAAGTATTATTGAATCACAGTGATAAAACAGAATAAACCTTTATTAACATTATTTCAGTAGTTATGGTTTCAGTTCCGATTCTGCTGCCGAGTTTCGACTCCCTGACAGATTATTACACCCTCCTGAGTTTGCTACCCGATTGATGATTGGCTAATATAGCCCCTATAGCTAATCCTAAATCTACCATGGGGACTGAGGGAGGTAATAATGTGGCGAGCAGCAGACCTCTAGTCTAGACGTAAATAACATCCCATTGGAATTAGTCTAGGTCTGTTTCATAATAGAAAAGCTGCATAACTTTTAAAAAAGGGAACACTACAAGGGCAGATACTCTGACATTAGTTAACCCATTATAAACTATCAATGAATATTTCTTTACAGCATTATTAATAATGTTTCATGTTCATTTATGAACTTTAGTGGCGATTCCATGACTTTTTTTAAAAAAGGAGAAGGCAAAAGGTTAAGAGAGAGGCCAAATTTATCAAGTTAATATCAGGTATGTTCTTGAAACTTGGAAATATAATGTTTTTGACATTTTTGAAAGAAGTCAGGTTTTGCTCACCAAGGCTGCATTTATTTGATCAAAAATAGAGTAAAAACTGTAATATTGTGAAAAATTATTATCCTTTGAAATAACTGTTTTGTAATATTTATTCCTGTAATGGCAAAACTGAATTTTCAGCATCATTACTCCAGTCTTCAGTGCCACATAATCCTTCAGAAATCATTCTAATATGCTGATTTGGTGTTCAAGAAACATTATCAATGTTGGAAAATATATATATATATATATATTGTTTTGCCTTAAAGATGTAAACAAAGAATTGGGGAAGACATGGCTCCCATCGCTTCTGATTTAACAGAGGAGAAGAGAAAGCAACTCTGTGCCTTGCTGGGGAATGTGGAACTGACTCTTCTCTACAAAGCTTCAGTCCATGGATATAATGCTTCTGCCTTCCACCAGCGATGTGACCATCAGGGCCCCACTTTACTTGTAGCCTACAACAGTTTAGGCTACATCTTTGGTGGATACACTAGTGTAGAATATGCTCAAAGTGGCCAGCAAATTACAGATAATGAAGCTTTTCTGTTCAGTGTTCAAGGTGAAACCCCTGTTCACTTTAAAGTTAACAAATTAAATGCACGTCTTGATGATGCTGGAGGACCTAACTTTTCCCAACAGTTGTACTTTTGCTACAATGACCAACCAGTTGTACATTACAAGTCAGTGAATTGGGTTCAGCATTTCAATACTGAAAAGTTGTATGGGAATAACACTGAGCTGACTGAATGTGAGGTGTACAAAGTCAATCAGAGCCTTCAGATCAGTTTCAAAGAGAAGCCATGGAGAAATATTCTTTGGACAGCCAAACAAAAAGAAGAGCTCATGGGATTGATCAGGAATCATAAACCCATTATGGCATCTGTGAGTCGGGTCAGAATCCTAATGATTGGTCCTATAGGTGCTGGAAAATCCAGTTTCTTCAACTCCATCAACTCCATCTTCATGGGTCATGTGACCAACAAAGCAATGTCAGGATCTGCAGGCACTAGTGTCACCACAAAGTTTCGCACATATCCAGTGAAAGATGGTCGTGAGAGAAAGCCATTGCCATTTGTGTTGTGTGACACCATGGGACTTGAGGAGCAATCAGGTGCAGGGCTGGATATTGAGGACATCAGCAGCATTGTTCAAGGTCAAGTACCAGACCGCTATAAAAGGGAAAAACTCAGTTCTGTACGTAGTCAATTGAACTCACTGGAGATTCCTCAGATGGTCTTGATGACAAAAGTAGATGAAACATGCCCTCATGTACAGAATGACCTTGAAAATATTTATGCAAGTTCCTATATCAAGATGAAGGTGCAGGAGGTGAGCTCTCGGTTGGGTGTTCCGGTGTCTTTTGTGTTGCCGGTGAAGAACTACAGCCAGGAGCTGGAGCTGGAGCTTAAATGTGATATTCTGCTTCTCTCCGCTATACAGCAGATGCTTCGTTTTGCAGACGACTATCTGGATGATGTGGTTGATTCCATTTAGGCCATACAAAGTGCTGCATATAGGGGTTTATACCTCTTGATCAGAACAAGGATTCATCTTAAGTCAGAAGATTATTCTCTTCTGTTTGTCCATTCTAGATCCTTCATAATCATACACAATATTCATTTAAGAAAATTATGGCAAATGCAAACAAAGTTCATATATCACTTAAGCTGCACATTACATTAAAATCATTGTTGCTTTTGTAGGTGCAATATTGCTGTGCCATGACCAGGTTTGTAGAATAATACTAGAATGATGTGTTAGGACTACAATTCAAGATGCTAAAATCTGTATAAGCCTAATAAA

Function

NR:

description
LOC555512 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_10757852_10760211.mRNA True 2443 mRNA 0.38 7 10757543 10761142

Neighbor

gene id symbol gene type direction distance location
CI01000004_10692864_10704094 TRPA1A coding downstream 53449 10692637 ~ 10704094 (-)
CI01000004_10619819_10627261 CNPY1 coding downstream 130282 10619019 ~ 10627261 (-)
CI01000004_10553379_10573352 PAXIP1 coding downstream 182300 10553037 ~ 10575243 (-)
CI01000004_10458668_10465442 NA coding downstream 291840 10458662 ~ 10465703 (-)
CI01000004_10436514_10438365 NA coding downstream 318084 10436499 ~ 10439459 (-)
CI01000004_10766385_10766860 TCEB1B, TCEB1, GM14517, TCEB1A coding upstream 5198 10766340 ~ 10766860 (-)
CI01000004_10788659_10809214 JPH1B, JPH1 coding upstream 27517 10788659 ~ 10809805 (-)
CI01000004_10847650_10847940 NA coding upstream 86415 10847557 ~ 10847995 (-)
CI01000004_10884499_10886045 CBLN2A, CBLN2, CBLN2B coding upstream 123284 10884426 ~ 10886045 (-)
CI01000004_10944147_11018487 CTNND2B, CTNND2 coding upstream 181235 10942377 ~ 11018487 (-)
G31206 NA non-coding downstream 2013 10755229 ~ 10755530 (-)
G31204 NA non-coding downstream 5176 10750849 ~ 10752367 (-)
G31200 NA non-coding downstream 30401 10726912 ~ 10727142 (-)
G31196 NA non-coding downstream 44612 10712286 ~ 10712931 (-)
G31212 NA non-coding upstream 11183 10772325 ~ 10772526 (-)
G31224 NA non-coding upstream 57008 10818150 ~ 10818353 (-)
G31234 NA non-coding upstream 70379 10831521 ~ 10831904 (-)
G31243 NA non-coding upstream 88289 10849431 ~ 10849634 (-)
G31245 NA non-coding upstream 97373 10858515 ~ 10858888 (-)
G31203 NA other downstream 6902 10746437 ~ 10750641 (-)
G30316 NA other downstream 1350622 9377937 ~ 9406921 (-)
G29746 NA other downstream 2399416 8354498 ~ 8358127 (-)
G29656 NA other downstream 2792043 7964364 ~ 7965500 (-)
G29388 NA other downstream 4125636 6631293 ~ 6631907 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 646323 11406957 ~ 11412907 (-)
G32150 NA other upstream 1015377 11776519 ~ 11780951 (-)
G32207 NA other upstream 1615026 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 3789658 14541515 ~ 14551352 (-)
G33746 NA other upstream 3807651 14568793 ~ 14569264 (-)

Expression


Co-expression Network