lta4h (lta4h,LOC107658863,LOC107656327,LOC107744078)


Basic Information

Item Value
gene id lta4h
gene name lta4h,LOC107658863,LOC107656327,LOC107744078
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 2835848 ~ 2845005 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237897.1
CCTTTCACAGCGCGAGCGGAGTGCTCTCTGTCTCAACCATGACTCCCGTGTCAGACCACAGCTCGTTCTCCACTCTCTCCAAGTGCGCGACCAAGCACTTAAACCTCATTTACCATGTTGACTTTGACAGGCACGTGCTCAAAGGGAAGGTGGCCCTGACGGTGGAAGTTCTGGAGGATAAATTCTCTTCTCTGACACTGGACTCAAAGGACTTGAAGATCTTTAAGGTTTCTGCCAATGGCCAGGCTGCGCAGTTTACGCTGGGGACCAAGCATAAATTTAAGGGATCCCCGCTAGAGATCACTCTGCCTTTTGAACTCTCACGcggGCAACATGTGATTGTGGAGATCGAATACGAGACGTCTCCTAGTGCTACAGCCCTGCAGTGGCTGACCCCCAAACAGACTGCTGGGAAAAAACACCCATACCTTTTCAGCCAGTGCCAGGCCACTCACTGTAGGACCATGGTGCCTTGTCAGGACACCCCATCGGTGAAGCACACTTACTATGCCCAGgtgtcTGTCCCCAGAGAGCTGGTGGCATTGATGAGCGCATTGCGTGATGGTCAGGAACCAGATCCGAGCGACAGCAGCCGAGTTATCTATCGCTTCAGACAGCCGGTCCCAATGCCTTCTTACCTCATTGCTATTGTCGTTGGTGCTTTGGAAAGCAGGGAAATCGGCCCCCGATCCAGAGTTTGGTCTGAGAAGGAGTATGTGGACGAGGCAGCGTTTGAGTTTTCAGAGACTGAGACCATGCTGAAGACGGCTGAGAGTCTGGCAGGGCCGTATGTGTGGGGCCAGTATGATGTCCTGGTGCTGCCTCCGTCTTTTCCTTACGGGGGCATGGAGAACCCCTGCCTTACATTTGTCACTCCTACTGTACTGGCTGGAGACCGATCCCTCGCTGGTGTCATTGCTCACGAGATCTCACACAGCTGGACGGGGAACCTGGTGACTAATAGGACCTGGGAGCATTTCTGGTTGAATGAGGGTCACACTGTGTACATCGAGAGAATGATCGCCAGGTCTATGGAGAGCGAACAGCTCCGGCAGTTTAAAGGCATCGGAGGCTGGAAAGAACTTCAAGAGTCTgTTAAACAGTTTGGAGCGAAAAACGTGCTCACAAACCTGGTCCCGAATCTGCATGAGGTGGACACGGATGAAGCCTTCTCCTCTGTGCCCTACGAGAAAGGGTTCGCTCTGCTTTATCATCTGGAGGAACTGATGGGAGGTCCAGAGGTCTTCATGGGTTTCGTGAAGTCTTACATTCAGCTGTTTGCCTATGGCAGTGTAACCACAGAGGAATGGAAGAACTATCTGTTCACTTACTTCAAAGACAAGGTGGACATCTTGAATAAAGTGGACTGGAATGGATGGATGCACACTCCAGGAATGCCTCCCGTCAAACCACAGTATGATACCACTATGGCAGATGCCTGCACTGCTCTGTGCCAGAGATGGGTGAAAGCAAAAGAAGAGGACCTTGCAAGTTTCACCGAGGCAGATGTGAAGAAACTCAACTCTCCTCAGCTCATCGAGTTCGTGGCTTTGTTGCTCCAAGAGGAGCCCCTTCCTCTGTCTCATGTGAAGAAGATGCAGGAGGTCTACCAGCTGAACTGCGTTAAAAATGCAGAAGTCCGCTTCAGGTGGTTGCGCGTCTGCGTGAGGGCACACTGGGAGCAAGCCGTCCCCCTGGCGCTGAAGATGGCCACTGAACAGGGCAGGATGAAATTCACTCGCCCGCTCTTCaaGGAAGTTTACAGCTTCTCCAAGTACAGCGAGGAGGCAGTGAAGACTTTTAAGGAGCACCGTGGAGCGCTGCACCCCGTTACAGCCATGCTGGTGGCCAAAGACCTGAAAATCGATGGCTAAGATGCTGCTTTCTGATCTTCCTATACACGAGCAGCGTTTCTATGCTTCAGCCTAGTGCTCGGATACAAAGCTGCATATCACACCTCCAACAGACGGGTTGCTGTGCAGAACGTTTTTCTCTTCATCGGCCAaagcttgcattttttttaatgtctcagTCTCAGGGCTCAGAacacaaaacaagcattttcaGTATCATGTAGTTCAGTGTTAAGAAATGAGTGTATCGTGACGTGAAGGATTGCTTCATGTACAAAGTAATGGTCTCCAATAAACTCATCTGTACAAGA

Function

symbol description
lta4h Predicted to enable aminopeptidase activity; epoxide hydrolase activity; and leukotriene-A4 hydrolase activity. Acts upstream of or within several processes, including epiboly involved in gastrulation with mouth forming second; neutrophil chemotaxis; and response to bacterium. Predicted to be located in cytoplasm. Predicted to be active in cytosol and nucleus. Is expressed in intestinal bulb; macrophage; and neutrophil. Orthologous to human LTA4H (leukotriene A4 hydrolase).

NR:

description
PREDICTED: leukotriene A-4 hydrolase

GO:

id name namespace
GO:0006954 inflammatory response biological_process
GO:0019370 leukotriene biosynthetic process biological_process
GO:0006508 proteolysis biological_process
GO:0004463 leukotriene-A4 hydrolase activity molecular_function
GO:0008237 metallopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K01254 LTA4H; leukotriene-A4 hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237897.1 True 2164 mRNA 0.51 19 2835848 2845005

Neighbor

gene id symbol gene type direction distance location
tfec LOC107584009,LOC107725982,LOC107658865,LOC107710111,LOC107580185,LOC107656331 coding downstream 12701 2783461 ~ 2823147 (-)
ppp1r3aa LOC107658872,LOC107584007,LOC107726069 coding downstream 331635 2499774 ~ 2504213 (-)
gpr85 gpr85,LOC107580073,LOC107710116,LOC107726048,LOC107658873,LOC107584006 coding downstream 364576 2467087 ~ 2471272 (-)
tmem168a tmem168a,LOC107658875,LOC107726047,LOC107710117,LOC107656353 coding downstream 412385 2415666 ~ 2423463 (-)
tnnt2e tnnt2e,LOC107658902,LOC107725993,LOC107656364,LOC107710083,LOC108425385 coding downstream 792987 2032823 ~ 2042861 (-)
cdk17 cdk17,LOC107658862,LOC107656329 coding upstream 18135 2863140 ~ 2904289 (-)
mcm10 mcm10,LOC107658860,LOC107726070,LOC107743741,LOC107656326 coding upstream 82800 2927805 ~ 2934976 (-)
nudt5 nudt5,LOC107658859,LOC107656337,LOC107726016,LOC107743836 coding upstream 90102 2935107 ~ 2938017 (-)
si:ch211-240l19.8 LOC107658767,LOC107725963 coding upstream 167761 3012766 ~ 3013359 (-)
LOC122343283 NA coding upstream 172627 3017632 ~ 3018211 (-)
LOC122343423 NA non-coding downstream 297842 2534205 ~ 2538006 (-)
LOC122343417 NA non-coding downstream 546729 2203585 ~ 2289119 (-)
G25362 NA non-coding downstream 552070 2283285 ~ 2283778 (-)
LOC122343454 NA non-coding downstream 653179 2167305 ~ 2182669 (-)
G25299 LOC108267243 non-coding downstream 672140 2163426 ~ 2163708 (-)
G25625 NA non-coding upstream 135154 2980159 ~ 2996458 (-)
LOC122342459 NA non-coding upstream 271399 3116404 ~ 3117297 (-)
LOC122342458 NA non-coding upstream 272474 3117479 ~ 3119550 (-)
G25673 wnt5b,LOC107656325,LOC103026771,LOC107580320,LOC107744029,LOC107726030 non-coding upstream 535653 3380658 ~ 3676399 (-)
LOC122342758 NA non-coding upstream 557819 3402824 ~ 3403502 (-)
LOC122342907 NA other downstream 362780 2472284 ~ 2473068 (-)
dock4b dock4b,LOC107656358,LOC108425388 other downstream 460132 2299635 ~ 2375716 (-)
tnni4a zgc:101560,LOC107725970,LOC107584059,LOC107658770,LOC107656258,LOC107581287 other downstream 738047 2091351 ~ 2097801 (-)
cald1a cald1a,LOC107583995,LOC107725991,LOC107658884,LOC107656362,LOC107710121 other downstream 747269 2042953 ~ 2088579 (-)
rsph9 rsph9,LOC107658900,LOC107583979,LOC107579672,LOC107710090,LOC107656226 other downstream 933185 1898403 ~ 1902663 (-)
ccdc3a ccdc3,ccdc3a,LOC107725961,LOC107658768,LOC107580337,LOC107744050 other upstream 154877 2999882 ~ 3012214 (-)
LOC122342805 NA other upstream 174087 3019092 ~ 3021512 (-)
LOC122342819 foxp2,foxp4,LOC107725896,LOC107728618,LOC107656011,LOC107675840 other upstream 689657 3534662 ~ 3577123 (-)
LOC122342822 tmem9b,LOC107674442,LOC107750540,LOC107754675,LOC107585953,LOC107700603,LOC107593285 other upstream 755995 3601000 ~ 3601991 (-)
LOC122342823 scube2,LOC107750541,LOC107585952,LOC107674429,LOC107593229,LOC107700597 other upstream 757351 3602356 ~ 3618367 (-)

Expression


Co-expression Network