prmt8b (prmt8b,LOC107757234,LOC107690649,LOC107694311,LOC108436013)


Basic Information

Item Value
gene id prmt8b
gene name prmt8b,LOC107757234,LOC107690649,LOC107694311,LOC108436013
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 5224238 ~ 5235056 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237942.1
TGGGAGGCACTAATTCAGCTACTGATATCGCTCCAGTTCCGCGCTCGCTGCGCTCGAGTTCAGTCAGCAGTCTTTCAACTCCAACTTTCAGCGCGATCCAGACGCACTTGACTGACCGCGACGCCACGGACTGGACAGCTGGGCTCAGATGACACGTtaagaactgaaaaaaagaatggaCCGATCTGTTAAAGCGAAATAAAAGATGCATCCTAGCGTGTCAGTGCCAGCGTATAGCGCGGGGATGCGCAGCGGCAGGTGATGTGGATGCTGACGCGCCGGGGCTCAACTGGTCTCCAAGTGGCTCTTAGAACCTGTGGAAGAACTTTTGCACGGCTGGCTTTCAGTAGGAGTCGAAATCATGGAGTTGAGGGACCGTCCAAGAAGTCTTTATGACAATTTCGGTATTAGTTTCCATTTAggcatttattgtttattaaacacTGCTGCGCGAATCAACAAATGGCTCGCTTTAACGCGCTAATCTAGTATTGCTTATTGCGGCACGTTTTAAAACTTTTCCGGCACGTTTAGTGACAGCACTTGTTCTTATCGAGTTAATCCGGATCCCGTTGGCTCGTATGGGACTGAGGCACTCATCGCGGTGCCTGCTCCTGCGGAGAAAGatggcggaggcggagagctcGGAGCAGCGCCAGCAGCAGCGTATTTCCAATGCTCCCTCGTCCCAGTCCTTGCAACCATCTCCGCTACCGAAGCCAGTGACATCTGTTCATCATGTTCCTCACCCCCCACACACGCCACACGTCTCCTCGCTTTCTGCCTGTCCCGGCCGAGGCAAGATGGCCAAGCTACTAAACCCGGAGGAGATGACATCACGAGACTACTACTTTGACTCCTACGCCCACTTTGGGATCCACGAGGAGATGCTGAAGGATGAGGTGAGGACGCTGACGTATAGGAACTCCATGTACCACAATAAACACATCTTTAAAGATAAGATAGTTCTAGACGTGGGCAGCGGAACCGGAATCCTCTCCATGTTTGCTGCCAAAGCAGGAGCCAAGCATGTATACGGGATTGAATGTTCCAGTATATCAGAGTATTCTGAGAAAATCATCAAGTCAAATCATCTGGACAGTGTTATCACCATCATAAAAGGAAAGGTGGAGGAGACCGAGCTGCCGGTGGATCAGGTGGACATCATTATTTCAGAGTGGATGGGCTACTGTCTTTTCTACGAGTCGATGCTCAATACTGTCATCTACGCCAGGGACAAATGgctgAAACCCGGTGGTTTCATGTTTCCAGACAGAGCCACATTGTACGTGGTTGCCATTGAAGATCGGCAATACAAAGACTTCAAAATCCATTGGTGGGAGAATGTCTACGGTTTTGACATGACGTGCATTCGAAACGTCGCTATGATGGAGCCCCTGGTGGACATAGTAGATCCTAAACAAGTCGTGACCAACTCCTGCCTCATTAAGGAGGTGGATATCTACACGGTGAAGCCGGAGGACCTGACGTTCACCTCGGCCTTCTGCCTGCAGATTCAGAGGAATGACTACGTTCACGCTCTCGTCACGTACTTCAACATGGAGTTCACCAAGTGTCACAAGAAGACGGGCTTCTCCACAGCCCCCGACGCTCCCAGCACTCACTGGAAGCAGACGGTGTTTTATCTGGAGGATTATTTGACGgtgaggagaggagaggagatccTGGGCAGCATCACAGTGAAGCCTAACGAGAATAACGAGCGTGACTTGGACTTCACCTTTGAGCTGGATTTCAAAGGACAGCTCTGCGACGCAGCCATCTCCCACGACTACAAGATGCGGTAAAGCGCGAGCGTCATCCTGAGCCGGGCCGCCGTTTCCCAGGGATCGGGCCTCTCCTCTGCCTCTGTCTGGATCAGAGAGGCTGCCGTCGGTGATGCCATCAGTGCCAGTCCAGCACTAAAAGCAATAGTGTCATCACGTGTCACGTTCTTAAATGCACATAGAGGATAGACTGTGAAAACATCACTCTGAATGTTACGGTAACGAGTCCGAGAATGTCAAAGCTTGTGTTTATTTAACCTTATAAGATAGGAAAGTGTCACCGAACAGTATTTGCAATGAGAAATCGTACAACAGTGCCTCATCGAACAAAGGCTTCAGTTCGGAGAAGAGCATGAATGGCATTTTTCACTTCATATTTGATGTTTCGCTTCTATTTAAGTGCTTTTCTTGCGTTATATTTATTGGGTTAGTGTTGAGTCGTTTAATATAGTGACCACTGGCATGTCGTCTgcctttattttaattcttttctaAGAGCAGCTACactattttaaatcattcttGTCAAAAGCAAgacctatttattattttagcgtGACATAACGTGAcagttttaactttttaatattttttggttttgtgtttttggtcaGTTGTCAGGTCATTGTCACATACAACCTTTGTGTAAAGCGATCCCTGAGCGGTTCAGATGAAGACAACGAACGAGGCACAGCATGCTCGACGCTGAATCCAGACGATGGTTTTCCCTCAATAATACATTTGAAGATTTTAGTGCTTCGTGTTGTTGTCATCAGCTGAACTCTCTCTACGAACGGTAACTGAAACACTTCTTGTTCAAGCAAATGAGGTTTTACTGGCCAGTTTGAAATCTAGGTTTCATGAAGCTAGCAAGACTTCAGGTGGGTTGAATGAGGCTATTGCAATGCTAAATAAATGGAAAGTAACAAACAA
>XM_043237943.1
GAGGCACTAATTCAGCTACTGATATCGCTCCAGTTCCGCGCTCGCTGCGCTCGAGTTCAGTCAGCAGTCTTTCAACTCCAACTTTCAGCGCGATCCAGACGCACTTGACTGACCGCGACGCCACGGACTGGACAGCTGGGCTCAGATGACACGTtaagaactgaaaaaaagaatggaCCGATCTGTTAAAGCGAAATAAAAGATGCATCCTAGCGTGTCAGTGCCAGCGTATAGCGCGGGGATGCGCAGCGGCAGGTGATGTGGATGCTGACGCGCCGGGGCTCAACTGGTCTCCAAGTGGCTCTTAGAACCTGTGGAAGAACTTTTGCACGGCTGGCTTTCAGTAGGAGTCGAAATCATGGAGTTGAGGGACCGTCCAAGAAGTCTTTATGACAATTTCGGTATTAGTTTCCATTTAggcatttattgtttattaaacacTGCTGCGCGAATCAACAAATGGCTCGCTTTAACGCGCTAATCTAGTATTGCTTATTGCGGCACGTTTTAAAACTTTTCCGGCACGTTTAGTGACAGCACTTGTTCTTATCGAGTTAATCCGGATCCCGTTGGCTCGTATGGGACTGAGGCACTCATCGCGGTGCCTGCTCCTGCGGAGAAAGatggcggaggcggagagctcGGAGCGCCAGCAGCAGCGTATTTCCAATGCTCCCTCGTCCCAGTCCTTGCAACCATCTCCGCTACCGAAGCCAGTGACATCTGTTCATCATGTTCCTCACCCCCCACACACGCCACACGTCTCCTCGCTTTCTGCCTGTCCCGGCCGAGGCAAGATGGCCAAGCTACTAAACCCGGAGGAGATGACATCACGAGACTACTACTTTGACTCCTACGCCCACTTTGGGATCCACGAGGAGATGCTGAAGGATGAGGTGAGGACGCTGACGTATAGGAACTCCATGTACCACAATAAACACATCTTTAAAGATAAGATAGTTCTAGACGTGGGCAGCGGAACCGGAATCCTCTCCATGTTTGCTGCCAAAGCAGGAGCCAAGCATGTATACGGGATTGAATGTTCCAGTATATCAGAGTATTCTGAGAAAATCATCAAGTCAAATCATCTGGACAGTGTTATCACCATCATAAAAGGAAAGGTGGAGGAGACCGAGCTGCCGGTGGATCAGGTGGACATCATTATTTCAGAGTGGATGGGCTACTGTCTTTTCTACGAGTCGATGCTCAATACTGTCATCTACGCCAGGGACAAATGgctgAAACCCGGTGGTTTCATGTTTCCAGACAGAGCCACATTGTACGTGGTTGCCATTGAAGATCGGCAATACAAAGACTTCAAAATCCATTGGTGGGAGAATGTCTACGGTTTTGACATGACGTGCATTCGAAACGTCGCTATGATGGAGCCCCTGGTGGACATAGTAGATCCTAAACAAGTCGTGACCAACTCCTGCCTCATTAAGGAGGTGGATATCTACACGGTGAAGCCGGAGGACCTGACGTTCACCTCGGCCTTCTGCCTGCAGATTCAGAGGAATGACTACGTTCACGCTCTCGTCACGTACTTCAACATGGAGTTCACCAAGTGTCACAAGAAGACGGGCTTCTCCACAGCCCCCGACGCTCCCAGCACTCACTGGAAGCAGACGGTGTTTTATCTGGAGGATTATTTGACGgtgaggagaggagaggagatccTGGGCAGCATCACAGTGAAGCCTAACGAGAATAACGAGCGTGACTTGGACTTCACCTTTGAGCTGGATTTCAAAGGACAGCTCTGCGACGCAGCCATCTCCCACGACTACAAGATGCGGTAAAGCGCGAGCGTCATCCTGAGCCGGGCCGCCGTTTCCCAGGGATCGGGCCTCTCCTCTGCCTCTGTCTGGATCAGAGAGGCTGCCGTCGGTGATGCCATCAGTGCCAGTCCAGCACTAAAAGCAATAGTGTCATCACGTGTCACGTTCTTAAATGCACATAGAGGATAGACTGTGAAAACATCACTCTGAATGTTACGGTAACGAGTCCGAGAATGTCAAAGCTTGTGTTTATTTAACCTTATAAGATAGGAAAGTGTCACCGAACAGTATTTGCAATGAGAAATCGTACAACAGTGCCTCATCGAACAAAGGCTTCAGTTCGGAGAAGAGCATGAATGGCATTTTTCACTTCATATTTGATGTTTCGCTTCTATTTAAGTGCTTTTCTTGCGTTATATTTATTGGGTTAGTGTTGAGTCGTTTAATATAGTGACCACTGGCATGTCGTCTgcctttattttaattcttttctaAGAGCAGCTACactattttaaatcattcttGTCAAAAGCAAgacctatttattattttagcgtGACATAACGTGAcagttttaactttttaatattttttggttttgtgtttttggtcaGTTGTCAGGTCATTGTCACATACAACCTTTGTGTAAAGCGATCCCTGAGCGGTTCAGATGAAGACAACGAACGAGGCACAGCATGCTCGACGCTGAATCCAGACGATGGTTTTCCCTCAATAATACATTTGAAGATTTTAGTGCTTCGTGTTGTTGTCATCAGCTGAACTCTCTCTACGAACGGTAACTGAAACACTTCTTGTTCAAGCAAATGAGGTTTTACTGGCCAGTTTGAAATCTAGGTTTCATGAAGCTAGCAAGACTTCAGGTGGGTTGAATGAGGCTATTGCAATGCTAAATAAATGGAAAGTAACAAACAA

Function

symbol description
prmt8b Enables arginine N-methyltransferase activity. Acts upstream of or within dendrite morphogenesis and midbrain-hindbrain boundary development. Predicted to be anchored component of the cytoplasmic side of the plasma membrane. Predicted to be active in plasma membrane. Is expressed in brain; eye; and somite. Orthologous to human PRMT8 (protein arginine methyltransferase 8).

NR:

description
PREDICTED: protein arginine N-methyltransferase 8-B-like

GO:

id name namespace
GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine biological_process
GO:0048666 neuron development biological_process
GO:0009790 embryo development biological_process
GO:0005886 plasma membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0035241 protein-arginine omega-N monomethyltransferase activity molecular_function
GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity molecular_function

KEGG:

id description
K11439 PRMT8; type I protein arginine methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237942.1 True 2720 mRNA 0.48 10 5224238 5235056
XM_043237943.1 False 2714 mRNA 0.48 10 5224238 5235053

Neighbor

gene id symbol gene type direction distance location
LOC122342835 LOC107571041,LOC107571048,LOC107658713,LOC107739149,LOC107704613,LOC107658717,LOC107733017,LOC107745022 coding downstream 8076 5207074 ~ 5216162 (-)
LOC122342834 LOC107690655,LOC107758320,LOC107745022,LOC107758319 coding downstream 18917 5201608 ~ 5205321 (-)
LOC122343482 LOC107757207,LOC107690654,LOC107758319,LOC107690655,LOC107574392,LOC107575819,LOC107573508,LOC107698248,LOC107573509 coding downstream 22554 5197046 ~ 5201684 (-)
LOC122343478 LOC107715531,LOC107560711,LOC107656209,LOC107571041,LOC107656205,LOC107656210,LOC107571048,LOC107574393,LOC564807 coding downstream 34973 5183467 ~ 5189265 (-)
LOC122343476 LOC107573509,LOC107589730,LOC107656205,LOC107560711,LOC107571041,LOC107656209,LOC107571048,LOC564807,LOC107658713 coding downstream 44139 5172565 ~ 5180099 (-)
net1 net1,LOC107560732,LOC107586493 coding upstream 219116 5454172 ~ 5476182 (-)
podxl podxl coding upstream 305233 5540289 ~ 5549648 (-)
LOC122342741 cyb5r3,LOC107590616,LOC107694301,LOC107757248,LOC107655553,LOC103021355,LOC105020308 coding upstream 340601 5575657 ~ 5578580 (-)
btbd11a btbd11a,LOC107757250,LOC107694300,LOC107725623,LOC107655613,LOC107560708,LOC108279962,LOC108426402 coding upstream 345446 5580502 ~ 5711019 (-)
si:dkey-222f8.3 si:dkey-222f8.3,LOC107694297,LOC107757251,LOC107725584,LOC107560723,LOC107655610 coding upstream 485360 5720416 ~ 5724961 (-)
G26228 NA non-coding downstream 64831 5159085 ~ 5159407 (-)
G26226 NA non-coding downstream 99723 5124068 ~ 5124515 (-)
G26225 LOC107715531,LOC107690654,LOC107715130,LOC107574393,LOC564807,LOC107577060,LOC564948 non-coding downstream 101488 5122472 ~ 5122750 (-)
G26121 NA non-coding downstream 215240 5008626 ~ 5008998 (-)
G26109 NA non-coding downstream 278177 4944128 ~ 4946061 (-)
G26237 NA non-coding upstream 5275 5240331 ~ 5241780 (-)
G26270 LOC107754060,LOC107562295,LOC107694310,LOC107560735,LOC107757236 non-coding upstream 107442 5342498 ~ 5344870 (-)
G26271 NA non-coding upstream 111729 5346785 ~ 5347055 (-)
G26281 NA non-coding upstream 151710 5386766 ~ 5389185 (-)
G26285 NA non-coding upstream 173571 5408627 ~ 5410039 (-)
LOC122343483 LOC107571041,LOC107724548,LOC107658713,LOC107704613,LOC107739149,LOC107589471 other downstream 129598 5085090 ~ 5094640 (-)
LOC122343492 LOC107743325,LOC107580925,LOC107658806,LOC107656283,LOC100330186,LOC107744995 other downstream 466411 4731224 ~ 4757827 (-)
G25880 LOC107658814,LOC107726023,LOC107592209 other downstream 956743 4264926 ~ 4267495 (-)
shank3b shank3b,LOC107725995,LOC107592218,LOC107656300,LOC107580703,LOC107743477 other downstream 1062410 4133977 ~ 4161828 (-)
LOC122342823 scube2,LOC107750541,LOC107585952,LOC107674429,LOC107593229,LOC107700597 other downstream 1605871 3602356 ~ 3618367 (-)
G26405 tnnt2c,LOC107560724,LOC107655611,LOC107725585 other upstream 483956 5719012 ~ 5720250 (-)
G26408 NA other upstream 494962 5730018 ~ 5736946 (-)
G26414 LOC107560737,LOC107690649,LOC107757234,LOC107589816,LOC107694311 other upstream 615348 5850404 ~ 5853366 (-)
G26462 NA other upstream 671699 5906755 ~ 5913538 (-)
mrps33 mrps33,LOC107694294,LOC107597883,LOC107725593,LOC107600452,LOC107655561 other upstream 702999 5938055 ~ 5940015 (-)

Expression


Co-expression Network