mcat (mcat,LOC107695903,LOC107591294,LOC107732994,LOC107725637,LOC107553884)


Basic Information

Item Value
gene id mcat
gene name mcat,LOC107695903,LOC107591294,LOC107732994,LOC107725637,LOC107553884
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 9583638 ~ 9586982 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238004.1
GCGCTGTTCACTTCTAGTTTTTGGAAGTACATCCAGTATTCGAATAGAAGAACAACACGACATGTGGGGAAAACGCTAGTACTAACCtaccttttcacttttttttttaaggtcgaTACAATGTAACTGTAATGTTGACGAACAAGGCTGGTTAGCGTTCGAGCTCCGTGTGAATAGAATGCCGGCGGCGTTCTAGAACCATGTGTTGAGCTCAATTAGGTTTCGGTCATGTATCTCGGGTGCTGTCGTAGAGTTCGTCTGCTTCGGAGTCCGGCGGCGGTCTGCCCTCGCAGAAGCCTGTCAGATGTCCCCGTCTCCCCGGATGACAGGGAGCCCGGCTCCGAGGACAAGCCCCGGAGAACACGCAGAGCTCCGGGGAAAGCGTCTGTCCTTCTGTTCCCCGGCCAGGGCAGTCAGTTCGTCGGTATGGGAAAAGGTCTCTTGAAGTATGGGAACGTCAAAGACATGTTTGATGTCGCCGAGAAGGTGCTGGGCTATGACCTGCTGTCTCTGTGCTTGAACGGACCCGAGGAAGACCTGATGAAGACCGTGCACTGCCAGCCGGCTGTGTTCGTCTGCTCGCTGGCTGCTGTGGAGAGACTGAACCGGGAGAACCCCGCTGCCGTTGAGAGCTGTGTGGCTGCGGCAGGTTTCAGTGTTGGGGAGTACGCTGCTTTGGTCTTCTCTGGTGCAATGAACTTTACTGAAGCTTTGTTTGCAGTTAAGGTGAGGGCAGAGGCAATGCAGAAGGCCTCTGACCTTGTACCCAGCGGCATGTTGTCTGTGATTGGCCGACCTCAAGCCAACTACAAATCCTCCTGCGTCCAAGCGAGGGAGCACTGTTCGTCTCTCGGCATCCGAGAGCCTGTGTGCGCCATTGCCAGCTACCTTTTTCCGGATGGGAGAGTAATAGCCGGCCACAAAGAGACTTTGGATTTCCTTCAACATCGCTCCAGAGCGCTGAACTTAATGAGAACGCGGTTGCTGCCGGTTAGCGGGGCCTTTCACACCGCCCTGATGGAGCCAGCAGTCGAGCCTCTGAGAGACGTCCTCAAAAAGATAGAGGTACGGCGGCCAGAGATCTCTGTGCACTCCAATGTGGACGGCAAGCGGTACATGCATGACAAGCATGTGCGCAAACAGCTGGTCAAACAGCTGGTGTCTCCGGTGAAATGGGAGCAGACGTTGCATGAGATTTATGAAAGACACCAGGGGCAGGACTTCCCTTACACGTATGAGGTGGGACCTGGGAGACAGTTGGGCTCAACGCTACAGAAGTGCAACATGAAAGCCTTTAAGAACTACACGCACGTAGATGTTGTATCGCAATAGGACCCGTGTGCAGGAAAACGTcttctttaaaatcaatgcaaaaaaGCCAAacggtttgtttttctttttaaaagttttattgcgCTTGTTGGTTTGGAAAGTCCAGCTTCCTTTAGTAGTGCAGAAATGCTTTTAGAGGAAGAGGTAACAATTCATTGGCCCAAATATCCAGCAGTagacccaaaacacacacacaaaaaaaacaacctttgtCAAAATCCTGCACATATTGACTTATATGTGAACCAGCACTTCATTCAAATCAGTTataaaagagattttaaaataagcagttttctttaaaaaatcagCTTCGGTTACATTTGAGCCAAAGACCAGCTCTTGACCCCCTCGATGTCACGTTCAGCCTTCATATTCGTTCCAAGTTATAAGGAAGATGGAAACGGTGACCAGAAGTAAAGCAGATGCTAGTATACACGTGGTCCTGCGAGACCAGTCGGCAACGGGCAAGTTGGATACCTGAGAAGAgaccacaaaaaatattcaattagtTTATATACCAGGTTTGCCACTGCCgaggtttttttaattatacgtTTTTAAGCCTACGTGAATGCGTTGAAATGAACAAGATCCTAAACGAATCAGAATTTCTgtagaaaatactttttgtaaagcTGTTCATACTCCTCAAAGTGTGTATGCGGCTAGAAATTGTGCTTTTGCcgaattttttctttaaaaatcccCCAAAGAGTTACAGAAAAAGCGTAGAAACGCATTAAAAACTGGGAACCATCAAATGCAGACTCTAAATAATGATaagatattattaaataataataatattcagcaGGGACTTCTAAAATTGATCGAAAGTAACAGTAGAGACATTCCGATAATATtccatttcagataaatgctgttctctgGAACCTgctgttcattaaagaattcagaaaaagaaa

Function

symbol description
mcat Predicted to enable [acyl-carrier-protein] S-malonyltransferase activity. Predicted to be involved in fatty acid biosynthetic process. Predicted to act upstream of or within fatty acid metabolic process. Predicted to be active in mitochondrion. Orthologous to human MCAT (malonyl-CoA-acyl carrier protein transacylase).

NR:

description
malonyl-CoA-acyl carrier protein transacylase, mitochondrial-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016746 transferase activity, transferring acyl groups molecular_function

KEGG:

id description
K00645 fabD, MCAT, MCT1; [acyl-carrier-protein] S-malonyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238004.1 True 2261 mRNA 0.47 4 9583638 9586982

Neighbor

gene id symbol gene type direction distance location
cbll1 LOC107695901,LOC107725636,LOC107590361,LOC107733012 coding downstream 2824 9577294 ~ 9580814 (-)
def6c LOC107695900,LOC107725651,LOC107590351,LOC107664889,LOC107732969 coding downstream 40131 9534425 ~ 9543507 (-)
atxn10 atxn10,LOC107695869,LOC107732963,LOC107725522,LOC107591266 coding downstream 52588 9523067 ~ 9531050 (-)
pparaa pparaa,LOC107695898,LOC107725614,LOC107732979,LOC107553885 coding downstream 106924 9461383 ~ 9476714 (-)
cdpf1 si:ch211-239e6.4,cdpf1,LOC107695897,LOC107732981,LOC107664868 coding downstream 122582 9458750 ~ 9461056 (-)
rap1b rap1b,LOC107695907 coding upstream 1014 9587996 ~ 9632618 (-)
prrt4b LOC107695904,LOC107725552,LOC107590384,LOC107664879,LOC107732996 coding upstream 67474 9654456 ~ 9674110 (-)
lepb lepb coding upstream 93204 9680186 ~ 9682387 (-)
LOC122343372 dcp1b,LOC107590561,LOC107738825,LOC107733007,LOC107589040,LOC107699046,LOC107694173 coding upstream 159958 9746940 ~ 9755926 (-)
snd1 snd1,LOC107738807,LOC107732977 coding upstream 429464 10016446 ~ 10157699 (-)
G27540 LOC107732962,LOC107553866,LOC107725684,LOC107695899 non-coding downstream 15341 9565447 ~ 9568297 (-)
LOC122342618 NA non-coding downstream 31477 9547639 ~ 9552161 (-)
G27532 NA non-coding downstream 38217 9545208 ~ 9545421 (-)
G27469 NA non-coding downstream 79638 9498716 ~ 9504000 (-)
LOC122343442 NA non-coding downstream 241899 9330007 ~ 9341739 (-)
G27549 NA non-coding upstream 10475 9597457 ~ 9654377 (-)
G27581 NA non-coding upstream 110714 9697696 ~ 9744787 (-)
G27627 NA non-coding upstream 428200 10015182 ~ 10015754 (-)
G27628 lrrc4.1,LOC107557314,LOC107732976,LOC107699068,LOC107738809,LOC108432552 non-coding upstream 496437 10083419 ~ 10138056 (-)
LOC122343524 NA non-coding upstream 735752 10322734 ~ 10349291 (-)
uhrf1bp1l uhrf1bp1l,LOC107695888,LOC107744929,LOC107664877,LOC107589017 other downstream 283459 9271972 ~ 9300179 (-)
klhl42 klhl42 other downstream 574334 9004260 ~ 9009304 (-)
LOC122343470 LOC107593478,LOC107664836,LOC107744937,LOC108435459,LOC108279443 other downstream 642235 8892019 ~ 8941403 (-)
th2 pah,th2,LOC107590157,LOC107664872,LOC107587609,LOC107744916,LOC107695848,LOC108437952 other downstream 709040 8870215 ~ 8874598 (-)
slc25a3a slc25a3a,slc25a3,LOC107744906,LOC107586622,LOC108437945,LOC105897470,LOC108279629,LOC107694680,LOC107593070 other downstream 1066055 8513630 ~ 8517583 (-)
zgc:193726 NA other upstream 768729 10355711 ~ 10363566 (-)
cacna2d4a cacna2d4a,cacna2d4,LOC107694142,LOC107738821 other upstream 897940 10484922 ~ 10522249 (-)
dcp1b dcp1b,LOC107590561,LOC107738825,LOC107733007,LOC107589040,LOC107699046,LOC107694173 other upstream 937549 10524531 ~ 10533543 (-)
ppfia2 ppfia2,LOC107694182,LOC107755902,LOC107680027 other upstream 1827738 11414720 ~ 11573766 (-)
kmt2e kmt2e,LOC107590817,LOC107590964,LOC107710662 other upstream 2066488 11653470 ~ 11683862 (-)

Expression


Co-expression Network