ppp6r2a (ppp6r2a,LOC107557302,LOC107699058,LOC107733000,LOC107694165,LOC107738817)


Basic Information

Item Value
gene id ppp6r2a
gene name ppp6r2a,LOC107557302,LOC107699058,LOC107733000,LOC107694165,LOC107738817
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 10382619 ~ 10397829 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238016.1
GCGCGCGCCTATGACAGAGTTTCGccattttggacacaaacataTGAACGGTTTTTATTTTCCGATCCCCCCCTTTTCCCTCGCCTCGCGCGTGAGCGGCCGAGACAGCTCTGCGCAGTCAGCGGGAGCGGAGTAATTTCCCCCCAAAAGCCCGTTTGCGCACAAGAGGGAGCGGAAAAGCGACTTCAGCGAGGACCATGGCTCGCGCTCTGGGCAGATAGTTGAGAGGAAAACGGTCTCGTGGCAGCTGCGGGGTTTCACGGAGCGCGCGCGGGGcagcggcagcagcagcagcagcccgTCTGAAGACGCTCGCAGCGGGGTGTCCGTCCGTCTGAGGCGTGTATTCGAGGAAGGCCTGGTGGGAAGTGGACCTCATGCAGATTAATGCTAGGTCATTCTGTGCTGTCTGCATTCTGCCACTCAAATGCCTGTCTGCCTGTGGAGGAGGTGTAACTAAGGATTCACACGTTTCATCAGCtggcttgggcttcctgctgcAGCAGCCACCGCCGCCATCATGTTCTGGAAGTTTGACCTGAACAACACCTCCCATATCGACCAGCTGCTGGATCGAGAGGGAGTCACTCTGAGAGAGTTGATGGAAGAAGAGGATGTCCTGCAGGAGTGCAAAGCACAGAACCGCAAGCTCCTGCTCTTTCTCTCCAAGGATCACTGCATGCAGGAGCTGGTCACCCTTATTACGGAGGAGCCCCCTGCTGACCTGGAGGAGAAAACACGCTTCAAGTTTCCAAACATTGCCTGTGAGCTTCTGACCTCCGATGTGGCTCTTATCAATGATAAGCTGGGTGGAGATGAATCCCTTTTGGAAAAGCTCTACCACTTTCTGGAGCAAGAGCCGCCTCTTAATCCCCTGCTGGCGTCCTTCTTCAGCAAAACCATCGGCAACTTGATTGCACGTAAAACAGACCAGGTAATCTCTTTCCTAAGGAAAAAACACAACTTTATCAGTCTGGTGCTGAATCACATTGATGCCTCGGCCATGATGGACCTTTTGCTGCGCCTCATCAGCTGTGTAGAGCCTGCCCCCTTGAGGATGGAGGTCCTCAATTGGCTGAATGAAGAGAGACTCATCCAGAGACTCACAGAGCTCATGCATACAGGGAGAGATGAAGAGAGACAATCTAATGCATCCCAGACTCTGTGTGACATCATTCGACTTAGTCGAGACCAGGGTAATCAGCTGTCAGAGGTCACCGAACCAGACCCTTTACTGGCTGTCCTGGAGTCACAAGAGAATGTGGCGGAGCTTTTGAAGAACATGTTTGAAGGGGAAAGGACTGAAGCGTCTGTCGTCAATGGAACGCAAGTGCTTCTTACATTACTGGAGTCACGGAGGTCAGGGCTGGAGGGTCTGATGGACCTGTATTCTCAGGGATGTGAAAGGTCTTACACTGTCAACAGCAGTATTTTACGTGCTATTGAGCCTCATCTAAAGGACTTCCAGCAGCTCCTACTGAACCCTCCTACGAGAAGTGCAATACTCACTACAGTGGGCGTTCTGGAGCAGCCCCTGGGGAGCGCCCGCCTTCATGTGGCCAGACTGGTGGCTTCTCTGCTGCAGACTTGCGACCTCAGCATCTGCCAAGAGATCTGCAGACTCAACACCATGGACCTGCTGTTGGATTTATTCTTTAAGTACACCTGGAATAATTTCTTGCACTTGCAAGTGGAGCTGTGTGTGGCATCCATCCTGAACCACTCTGTCCACACGGACCTCCAGAACCCAGGTCTGCAGAACCACGAGGAGAGACCAGCTGCAGGCACAGGCAGCCCAGTGGAAGAGGGAACATCTGGCCAGAACAGCACCTCAGACCCAGCAAACACACCCATTCAAGATGCTCTCGTTGCCAATCTATTCCAGCATTGCCGGCTGGTGCAAAGGATTCTGGATGCTTGGGAGGAAAACGACAAAATTCAGGTTGAAGGAGGAAGGCGAAGGGGAAACATGGGTCACCTGACAAGAATTGCAAACACTGTGGTTCAAAACCTGGAGAAAGGGCTGGCGCATTCTCAAATTAATGACCTAATTAAAGAGCTGCCTGAGGACTGCAGAGGCCGCTGGGAGAGTTTTGTGGGTGAGACTTTGAGAGAGACCAACAGGAGAAACACAGTGGATTTGGTGAGCACCCATAACTTACACTCATCTAGTGAAGATGATGACATGGAGAGCCCTTTCCCAAATGATCTGTCCATCCAACAGGCATTCTCTGATTATCAGATTCAGCAGATGACCGCCAACTTTGTGGATCAGTTTGGTTTTAATGATGAGGAGTTCAGTGAACACGATGAAAATATCAATGCTGCGTTTGATCGAATTGCTGAAATTAACTTCAATATAGATGCAGATGATCATAGTGCCAATGCTGCAGCTTTTGAGGCGTGTTGTAAAGAAAGAATCCAGCAGTTCGATGACtgtgaagaagaggaggatatttgggatgaaaaagaaataaactatGCAACACAAATCAAATCCAGATCGAGGTTCGGGGTGTCTCTTTCTTcagatagttcacccaagagTGCAGTGAGGAATGGGGGTGGAGGCCGAGGGTCGGCCTCTGAGGAAGAGGATGTTGAGGAAGAggccagtcctcagcagtctgCAGCAGCTCAGACTCAAAATCCAGGCTGGACGGCGAGTTTTGGCGAGACGGAGGTGAGCTCCTCTAGCTCCTGGGGTGGCTCCCCTCAGCAGGGAGGTGAGGGTCCGCAGGACACAAGCTGGGCCTCATTCACTGAGTTCCAGCCTTTCAGCAGCACAGAGTCCAGCCAGGCTGAGGGACAACCTCAACAAGGCCACGAAAAGAACTccgCAGCAACTGGCAGTGGTTCAGCTACGGGAGCGTGGGAAGGAAGTCCTGGGCAAAAAGCCCCTCTGGTGGCCTCAGACAGCAGCTCGTCTGGAGGCTCAGACAGTGAAGAGGACCCTGGAGAAAATAAGACCGAGGGTTCCCCTAAAACACCTGCCAACCAGACAACGGCACCCTCAAGTGAGGTGCCTATTGAAGCTCTGGAGAAGCTCAGCATCACAGACAATAGCGAGTCTTCAGCGACTACAGAAGAATCAGATGCTACCACTGTGACAGAGACAAGAGTCGAGGCACCTGCTTCAGCTGAGATCACGCCTAATGGACCGGTCTGAAGGCTCTGGATAGGAGTCCGACCCACTCTCCGCCTCTTCCATTCTGAACCCCCAAACCTCAATACCACTTTGGTGTTTAAATAAAGAATGCTGCCATGTTATTGGTCCTGGATACTGCCAATCAGCCCATAATTGGAGGAGGAAGCCAGGGGCATGTAACACAAACCAGTAACCAGTACAGTGCTCAGAGGTGTTAGTCTTTTAACCCTTTCAACTTTGTATGAGATATGCACAGTTTTAAATGTAGCAGTGACCGTGTGATTACAGGATCTGTCaggacttcttttttttccccctcggTTTGTGTCCCTCCCTGAATTTTTCTGGATTCGTTAATTTTTTTCGGTAATTTTTTTCGCTTCCAGCCTTGGATGGTAGAAAACAGGGATGTAAAGGTCCTAATTGGAAAGCACAGGCTCATCCTTCATGGCATAACGTCTTGAACACCCTCATGCAAAATCGAAAGCCTCGTTGCCTGACGACAGCCTCTGCAACAATTTACTGTATGTTGaagcacaactgaaatgttctgtAATGCTTGACACATTTCTGCACAGGTCACCGCCCTGCCAAGTTcactttaaagattttttttaaaacattattattattattatggccTAATCTCATTAAATCATGTATTTGAATGTTCTGAAGTGCTTTGGGGCAGAAACGTACGCCGCTGTGTCCACGTCGGCACCTGTGCAGTAATGTttagtcatttaatttaaattggaCTCATTCGGAAACTATACATTAATGGTGGGGTGCCTCTTTGAATTTTTTGGACTTCTTCATTGCATGCGTTATTTATCAAGCATATAGAagcagctgtttttttctttttcgacAACATTCTAGCTAGTTAGTCAAGACCTTCTGATTGTATTGAATTACTTTTGTCTGATTCCCCCCTCCCCCCCAGATCAACTAAACAGTTTCTATctaattttcttcattttatgcTTAAGCTTtccaaaattttaaattgtgtgtttAAAGCGAAAAGCTTAAAGTAATCGTAATAACCTTTGCCTTAAGTTGCAAATCCTTCAGAATCCCTGTTACAGGACGGAAGGGTTTGCCTCAAAGCAAACAGgcttttttgtctgtttttaaataacagctgGTCTCGAACGATCCACCCCCCACAAATTTATTTGTATCCTTGTCCAGCGCCAATGCCCCCAGAGGTCAAGAACATTTGCTCCAATGTGACAGTATACCCTCACATATGAAATACTCCACAGGACAGTGTTTTGCATCGTTTTTTTTGTCCAGAACTCTGAAAATCTTTTCAGACTTGTCTCAGAACCTTCCGGTAGCTCTCGTCGGAAATACCAAGATCCAcctctttttaatatttcatcctGAACATcatgtgattattattttttttttcccaggattTTTTTTGGCCATTACATTTCACGTATCATATCTCTGCAAGCGTACTATGGTACCAAATCTGTTGGATTACAGGATTGGGATAATGCgttatttattttgcacttaTTGAGGTGTTAGTAAGGAGACCTGGTTTCCCATCATGCATTGGAACACcgtgtatttctttttctttttttttctcgctcTACATGATCTTTGCCTCTGGAGTGTAAATGCTCCATTGACTCTGCTTCTTATATCTATGACATGTTCAAATAGGTTTGTTTCCAAAGCCAAAAGTAtgtatttgccttttttttttttcttttaactgttaaaaaaaaatcttatttttaacttttaaccaatattattttgcatattgtaGAGATTCTAATTTATGTGATCTTCGGCAACCAAAATATTGCTCTGTTCAATTCTGTCCCTGTGTCCGGGCTGTTTCTGTACATTTACAGAGTTGGGAGTTCGAAgcttgtattcatttatttttcccagGAGAAGTCTCAGATATTTAACAGATGACggttgtgttatttttaaaagctgccaaacattttaattctaatgACTGTTCCGGGTTCGATTCTGTTACAACCGAAAATAATTTCGACTCCCTCCTCGGATTGCACAAGCAAGTCGTCCGTTTACAGGGAAGGTTGACATGGTTCCGGAATAAATCTTTTGACTCTCTGTTACTAAAGTATAGCTTTAGATGTGGCGTGAATTATAATGAAGTTCACGCGGGAAAGAAAATGCGCCCCTGTGGAATTCTtgcttctgattggccagtcGCTATGCATGAATACGCTCATCCGGGTAACTAACGGTCACTCTAGTAAGATTGAGCGTaaacggcgccatcttgtgtCGACGATGCCACTTAAACGCTAAAACACAAAATTGAGGTAAATATAACTTGAATACATCTTGATGTAAAGTGAGCGGGCTGTTTGGGCAAACAAGTAACGAACAAATTAAACCTCCACGAGTTGGACCACGGCTAACGTTAACCGTCAGCTTTAGCGTCGTTTCTGAGCAGAAGCTGAAATGCGTCGAAATTGTTTTCTCTTAGTTAGCAGCATCGAAACCGGAACATTTCTGTGCAGCTGTACGAGCTCCCCACGGCGACCCTGATCGGATTTCATGGATGTATTTCGTGCACTTGTACATAGCGGTTATATATCTCCATGCCGTAATAACGATGCTGGGTTTGAGGGGATGGACGCACGCTGCAGGATAAACGAATTACCGCGTTTCAGAGCACTTCAATTCCCGCTAGTCATTCGTTTTAGAGAATTAGTACATTTGAGACAGTTTGTCAGAATATAAGGTATTCATCGATGGCATAAAAAAAAGGTAGTTCTCAGCGCATTGACATTTGTATAGACTGGGTCTGTACATTATATTGTTGCCTACATCAGTAcctatatattttgatattttcagaaTGGAATAAATCTGTTATTGAGAGAAA

Function

symbol description
ppp6r2a Predicted to enable protein phosphatase regulator activity. Predicted to be involved in regulation of phosphoprotein phosphatase activity. Predicted to be active in cytosol and nucleus. Orthologous to human PPP6R2 (protein phosphatase 6 regulatory subunit 2).

NR:

description
PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 2-like isoform X1

GO: NA

KEGG:

id description
K15500 PPP6R2, SAPS2; serine/threonine-protein phosphatase 6 regulatory subunit 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238016.1 True 6053 mRNA 0.46 24 10382619 10397829

Neighbor

gene id symbol gene type direction distance location
gcc1 LOC107732988,LOC107738815,LOC107590505,LOC107694160,LOC107699059,LOC107557305,LOC107557306 coding upstream 8302 10369339 ~ 10374317 (+)
pax4 LOC107695909,LOC107576795 coding upstream 218133 10161147 ~ 10164486 (+)
lrrc4.1 lrrc4.1,LOC107557314,LOC107732976,LOC107699068,LOC108432552,LOC105904105 coding upstream 294282 10083600 ~ 10088337 (+)
LOC122342860 ppfia2,LOC107694182,LOC107755902,LOC107680027,LOC107749078 coding upstream 639067 9723107 ~ 9743552 (+)
LOC122342846 ppfia4,LOC107675841 coding upstream 660153 9715610 ~ 9722466 (+)
ccdc146 LOC107694170,LOC107738828,LOC107591091,LOC107732959 coding downstream 50450 10448279 ~ 10463617 (+)
cacna1c cacna1c,LOC107590584,LOC107732972 coding downstream 130216 10528045 ~ 10642451 (+)
LOC122342684 NA coding downstream 316931 10714760 ~ 10716607 (+)
LOC122342683 NA coding downstream 319924 10717753 ~ 10720201 (+)
LOC122342682 NA coding downstream 324496 10722325 ~ 10726265 (+)
G27651 NA non-coding upstream 17048 10287478 ~ 10365571 (+)
G27643 NA non-coding upstream 118419 10262869 ~ 10264200 (+)
G27562 NA non-coding upstream 510616 9686499 ~ 9872003 (+)
LOC122342587 NA non-coding upstream 708942 9660487 ~ 9673677 (+)
LOC122342620 NA non-coding upstream 825901 9554960 ~ 9556718 (+)
G27731 NA non-coding downstream 250863 10648692 ~ 10659331 (+)
G27729 NA non-coding downstream 255875 10653704 ~ 10658141 (+)
G27754 NA non-coding downstream 778595 11176424 ~ 11178043 (+)
G27760 NA non-coding downstream 780693 11178522 ~ 11179311 (+)
G27777 NA non-coding downstream 878600 11276429 ~ 11296804 (+)
lamtor4 si:dkey-159a18.7,lamtor4,LOC107590499,LOC107557308,LOC107694163,LOC107699063 other upstream 14694 10365712 ~ 10367925 (+)
G27629 NA other upstream 125066 10158159 ~ 10257553 (+)
G27490 NA other upstream 792301 9587319 ~ 9590318 (+)
G27508 LOC107695901,LOC107725636,LOC107553882 other upstream 804045 9577315 ~ 9578574 (+)
wnt7ba wnt7ba,wnt7b,LOC107591249,LOC107695867,LOC107725526,LOC107732964,LOC107664847,LOC103028473 other upstream 860586 9504080 ~ 9522033 (+)
lrtm2a lrtm2a,LOC107738823,LOC107694175,LOC107590570,LOC107732983,LOC107589042,LOC107699047 other downstream 81612 10479441 ~ 10507554 (+)
rassf8b rassf8,rassf8b,LOC107590609,LOC107589039,LOC107738830 other downstream 264402 10662231 ~ 10675110 (+)
zmp:0000000650 LOC107694155,LOC107589077,LOC107732968,LOC107680013,LOC107574990 other downstream 288268 10686097 ~ 10702203 (+)
LOC122342850 LOC107740709 other downstream 309303 10707132 ~ 10708947 (+)
myf5 LOC107560306,LOC107680018,LOC107749081 other downstream 933716 11331545 ~ 11334456 (+)

Expression


Co-expression Network