si:dkey-159a18.1 (LOC107694153,LOC107591329,LOC107738834,LOC107699055)


Basic Information

Item Value
gene id si:dkey-159a18.1
gene name LOC107694153,LOC107591329,LOC107738834,LOC107699055
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 10404599 ~ 10413735 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238018.1
AGTCGGGTCCCCGGCAGCGCGCTCACTCCTCCTCCTGAGCGCATCAAAACCGACTTCTGTCTCCCAGCCCCATACAGTCATGAACCGGGCGTTGCTCGTACTGGGTAGCGTGTACTTACTGGTCCTCGGCGAGGACGCGTTCGCTCACGGGAAGCGCGGCGCGAGGACGGCGACTTTCTCTCGGGCTCCGCGCGGTCAGTCGAGACACAGACGGGACACCTGGACCGGACAAGCGCGCTTCACGGCATGCAAGTCTCCGCTGTCACCCACAGACCAAGCGCTCCTGCTCAGCCACACGCACGAGACCGGGTTTCATGGGGACGATGGATCCAGTTTTACCCTCACATGGGTTGGAGATGGCACTGGGGTAATCCTGGTTCTTTCCACACTCAGCGCTCCCTCAGACTCGTTTTATGAAGACGGTTCGACGCGACTTTATAGGAGTGAAGACTATGGAAAATCTTTTCATGATGTCTCCCATGCCATTAACAACACGTTTATAAGGAAGGACTTTGGGATAAGTGCTGGACCCGGGAACCCTCAACAGGTGATCTTAACAGCCAATCTGCCTTTCACCGAAACCCCAGGAGGAGTTATTTTAACATCAATGGATGCTGGTGTGACGTTCAGATCAGTGCATCTTCCATTCCATCCAGCACAGGCCATTCAGTTCCACTACCAGGACCCAAAATACCTTGTGGTCATCAGCATTGACGATGGCCTGTGGCTCTCACAAGACTTTGGAAACAGTTGGTCTGAGGTTCACAAAGGAGTTCACACATTCACATGggGATCTGGAATCACCCTTTTCTTCAGTTCCAGCCCAACAGGAACTGTGGAGGCAGCCAGACGAGGCGAACTCATTCTGAGAAGGACGCAGGATTTCGGCAAAACTTTCACCACCATCGACAACAACATCTTCTCTTTTGGATACATCGGTGGCTTCCTGTTTACCTCTGTCATGGAAAAACTGGGGTCTCCGCGTGTCATCTATGTGTCCTCAGACCAGGGTGACCATTTCAGAAAAGCTCAACTACCATCAGCAACTACAGAGCAGTTCTACTCTGTTTTGGACGGAGACGTGGACATGATCTTCATGCATGTGGACAACCCTGGAGAAGACACATATTTTGGGACAATCTACACCTCTGATGACCGTGGAATCCTGTATTCTAAGTCTCTGGAGCGCCACCTGTTCGGCGGGGAGGGGAAGAGCGATTTCACAAACGTTACCTCTTTGAGAGGGGTCTATCTCACCAACATACTGGAGGAGGATGGACGCATCCGTTCTGTCATTACATTCGATAGAGGTGGGAGATGGAGATTTCTGAAGAAGCCAGAGAATGTGAATTGTCCAGAAACCTCAAAAAAGTGTAACCTGCATATCCATGGAGAGCACAGTCACTTCAGTGGAATCACTCCCATGCTGCCTCTCTCTGAACCTACCGCCATTGGTCTGGTCATCGCCCATGGTAGTGTCGGCGACTCCATTTCAGCCGCTCGGCCGGATGTGTACGTGTCTGGGGATGGAGGTTACACATGGTGGGGGACTCTGAGAGGGCCTCACCACTATAGCATCCTGGACTCTGGAGGGTTGATAGTGGCCGTGGAGGCgcatagagacagacagatcagTTCAATAAAGTTTTCCACAGATGAAGGACAGTGCTGGcagatatttaattttacagaacACCCCATCTTCTTGGCAGGACTGGCATCCGAGCCAGGCACCAAGACAATGAATATCAGCATTTTCGGCTACCGCCCAGATGATGATGATCAGCCCATGTGGGTGGCTGTCACCATAGACTTTGAGCACCTTCTCACCAGAGaatGTGGAGAAGAGGACTATGTGCAGTGGTTGGCGCACTCTGACTATGACTCAGACCCAGAAACAGACGGATGCCTCTTGGGCTACAAAGAGACATTTAGAAGACTAAAGAAACTGTCAGCATGTAGAAATGGGAGAGGCTATGTGGTCAGCAGGCAGCAGCGTCCATGTCCTTGCACAAGAGAAGACTACATGTGTGAGTATGGTTTCTATCGGCATGAAAACACCTCGGAGTGTCTCCTACAACCCGGCTTCCTGAATCAAACCCAGAATATTTGCTTAAATGCGGAGCTAGATGACCTGCAGTATACAGGGTATCGTAAGATTCCTGGAGATAAATGTGAAGGGGGTGTCAGGCCTTCGAAACGAGAAGATGTTTTCACAAAGCTTTGTGAGAAGGATATTTCACCAACGAATACTAAAAGATCACCGGGCATGCTGGTTCTTATTGTGGTGTGTAGTTTTGTGGGGGTCACTGGTTTGGTTATTTCTGCAGCTTTAATAATCACTTCAAGAAGGATAAACTGTACGCAAAGGTTACCTGCTTATCGCTTTTCGGCCCTGCAACTCCAAGAAGATGACCTGTGTGTTAGCAATGAGAGCAGCCCCAGTGGTAAACTCAATGGTTTTCAGGTCCAGGAGGACTCAGATGATGATCTCATTgaatgaacagcatttaaacaCTGGGAACTACTCAGGCTTCGCAGACACTTGTGAATTGTTTAAAGTGAATCTCATAACCCAGGCACTGTGACTGGACAATAAACGCTTGGAAATAACGGTGAACTGCATTTTTCAAACCGAGGCAAATGATAACTTGCTACGGCCAGGTTCTTATTTTGTCCTATGAAGTCTCTTATACAGGGACCAGAGGATCATTTTTGGGAGTGAATCCCCTTTCACCCTCTCTGCCTTTTGCACTGGAATCATTCATATTTCCTCAGGCTGCTGCTGGCAATCCTCCTTGAGCTTTGGGGCTGTGTATTTTCAAATAGACCAATCTACTgtttttgaatttgtaaataaatgaaaatgcat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238018.1 True 2872 mRNA 0.49 21 10404599 10413735

Neighbor

gene id symbol gene type direction distance location
fam3c fam3c,LOC107738818,LOC107694166,LOC107699057,LOC107733009 coding downstream 841 10398091 ~ 10403758 (-)
dennd6b dennd6b,LOC107738816,LOC107590515,LOC107694164,LOC107732989,LOC107557304 coding downstream 22884 10373628 ~ 10381715 (-)
atp6v1f atp6v1f,LOC107590479,LOC101079638,LOC107557307,LOC106511462 coding downstream 39015 10364105 ~ 10365584 (-)
drd4-rs drd4-rs,LOC107591318,LOC107738833,LOC107557292,LOC107732971,LOC107699035,LOC108432516 coding downstream 84426 10301342 ~ 10320173 (-)
cdhr5-rs LOC107699064,LOC107590451,LOC107733013,LOC107738811,LOC107557309 coding downstream 113726 10275513 ~ 10290873 (-)
cep83 LOC107694167,LOC107738819,LOC107591083,LOC107699054 coding upstream 460 10414195 ~ 10421161 (-)
lrrc17 lrrc17,LOC107738820,LOC107694168,LOC107591338,LOC107699038,LOC107557290 coding upstream 10197 10423932 ~ 10433495 (-)
LOC122342631 NA coding upstream 32910 10446645 ~ 10448364 (-)
fgl2a fgl2a,LOC107694171,LOC107590533,LOC107557300,LOC107733002,LOC107699052 coding upstream 35104 10448839 ~ 10451807 (-)
LOC122342626 gsap,LOC107733001,LOC107699053,LOC107557299,LOC107694141,LOC107591096 coding upstream 50026 10463761 ~ 10476981 (-)
G27883 NA non-coding downstream 14794 10389447 ~ 10389805 (-)
LOC122343524 NA non-coding downstream 55308 10322734 ~ 10349291 (-)
G27628 lrrc4.1,LOC107557314,LOC107732976,LOC107699068,LOC107738809,LOC108432552 non-coding downstream 266543 10083419 ~ 10138056 (-)
G27627 NA non-coding downstream 388845 10015182 ~ 10015754 (-)
G27581 NA non-coding downstream 659812 9697696 ~ 9744787 (-)
G27894 lrtm2a,lrtm2,LOC107738823,LOC107590570,LOC107694175,LOC107732983 non-coding upstream 32700 10446435 ~ 10562772 (-)
G27910 NA non-coding upstream 236163 10649898 ~ 10659974 (-)
G27940 NA non-coding upstream 300895 10714630 ~ 10720284 (-)
LOC122342624 LOC107694146 non-coding upstream 516862 10930597 ~ 10932401 (-)
G27974 syt1a,LOC107590640,LOC107694178,LOC107734425 non-coding upstream 712767 11126502 ~ 11259483 (-)
zgc:193726 NA other downstream 41033 10355711 ~ 10363566 (-)
uhrf1bp1l uhrf1bp1l,LOC107695888,LOC107744929,LOC107664877,LOC107589017 other downstream 1104420 9271972 ~ 9300179 (-)
klhl42 klhl42 other downstream 1395295 9004260 ~ 9009304 (-)
LOC122343470 LOC107593478,LOC107664836,LOC107744937,LOC108435459,LOC108279443 other downstream 1463196 8892019 ~ 8941403 (-)
th2 pah,th2,LOC107590157,LOC107664872,LOC107587609,LOC107744916,LOC107695848,LOC108437952 other downstream 1530001 8870215 ~ 8874598 (-)
cacna2d4a cacna2d4a,cacna2d4,LOC107694142,LOC107738821 other upstream 71187 10484922 ~ 10522249 (-)
dcp1b dcp1b,LOC107590561,LOC107738825,LOC107733007,LOC107589040,LOC107699046,LOC107694173 other upstream 110796 10524531 ~ 10533543 (-)
ppfia2 ppfia2,LOC107694182,LOC107755902,LOC107680027 other upstream 1000985 11414720 ~ 11573766 (-)
kmt2e kmt2e,LOC107590817,LOC107590964,LOC107710662 other upstream 1239735 11653470 ~ 11683862 (-)
magi2a magi2a,LOC107680009,LOC107755877,LOC107591172,LOC107694149,LOC107590979 other upstream 1428230 11841965 ~ 11996639 (-)

Expression


Co-expression Network