LOC122342415


Basic Information

Item Value
gene id LOC122342415
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 14068087 ~ 14070405 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250560.1
TCTTGTATATGATTCCAGATTTACAATCGTGGTTTTCAGGGAACTTCCCTCTCCTGGTTCCCTTCCCTGCGCAGTTGCttctggattttattttatttaccaaacatttgcatttattcattttagcaaaAAGAGTGAGAGAAGCTCCACACAACGTAGTCGGAAAATGTGGCGACGTTCATTGTGATTTATTGAGATGGATAAAGCCAAAAAGGAGAAGAAGGAAAAACATGAAGTGGGATGCAGCTGGTGATCAAACTGTCCCTGAAGCGGATCTTGAGTGTTTCCTCGGAGTGCAGTCGATCAGTCTGTCCCAGGCTGAATAACGGAGGTACAGCGCAGTTCCGAGCAGGAGCAAATTGAGTTTGAAGAGCTGAACATGGAAGATCAAGCTAAGCTAGCATCACCGACCAAATTCAAGCACTTGGgGCGCTTAGTGAGCTGCACATGACAAGGCTGACGGTCAATGACAAgaagataaaaacaaagctCTTGTCTACGGTCAAGGCCTTCATTGAAACTCGTCATCCAGACTTTTTGGGAGACTATCAGCAGGATGGCCATGAGTTCTTGATGGTTTGCCTGTCCCGTCTGAAAGAGGAGGGAGAGTTTCTGCAAAGCTATTGTGCCTACATACACCTGCCCAGTAATAATATGGAGTTTCAGCTCAACCGCCTGCAACAGCTGTGGCTTCCAGAGGAGCTTCAGGGAAGATTCCAGCTACCACTCTCTGGTGATCAGTCCTCAAAGAAGCCTCGCTGACAGCTTGGAGCAGTATTTTAAAAGAGTAAAGAGATGACCGTGATAGACAGAAAAGGCCCAAAACAACGAAAAAATTTGTATTGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250560.1 True 848 lncRNA 0.45 8 14068087 14070405

Neighbor

gene id symbol gene type direction distance location
srr si:ch73-263o4.4,LOC107569226,LOC108427077,LOC107666211 coding downstream 82641 13982356 ~ 13985446 (-)
alg10 alg10,LOC107726832,LOC107689747,LOC107721156,LOC107666210,LOC107600015,LOC107569225 coding downstream 87472 13975805 ~ 13980615 (-)
LOC122342633 NA coding downstream 92457 13970264 ~ 13975630 (-)
LOC122343235 LOC107689737,LOC107716193,LOC107689255,LOC107584741,LOC107716201 coding downstream 283379 13763390 ~ 13784708 (-)
LOC122342931 LOC107689242,LOC107689241,LOC107584712,LOC107689720,LOC107597003 coding downstream 307231 13750834 ~ 13760856 (-)
LOC122342640 cerk,LOC107689729,LOC107552286,LOC107710741,LOC107600034 coding upstream 634388 14704793 ~ 14725207 (-)
LOC122342645 abcd1,LOC107743108,LOC107701814,LOC107552221,LOC107727428,LOC107674359,LOC108265308 coding upstream 740603 14811008 ~ 14822661 (-)
LOC122342646 prkcq,LOC107748461,LOC107555829,LOC107675981 coding upstream 755862 14826267 ~ 14847177 (-)
brd1a brd1,LOC107744592,LOC107563621 coding upstream 1053640 15124045 ~ 15136539 (-)
alg12 alg12 coding upstream 1073383 15143788 ~ 15148210 (-)
G28594 NA non-coding downstream 75285 13992051 ~ 13992802 (-)
G28577 NA non-coding downstream 86923 13980790 ~ 13981164 (-)
G28570 NA non-coding downstream 185680 13882191 ~ 13882407 (-)
G28569 NA non-coding downstream 186075 13881305 ~ 13882012 (-)
G28568 NA non-coding downstream 187240 13880031 ~ 13880847 (-)
LOC122342647 NA non-coding upstream 741035 14811440 ~ 14825838 (-)
G28738 NA non-coding upstream 932744 15003149 ~ 15003429 (-)
LOC122342397 NA non-coding upstream 947380 15017785 ~ 15023863 (-)
G28789 NA non-coding upstream 1139279 15209684 ~ 15213451 (-)
G28850 NA non-coding upstream 1346451 15416856 ~ 15418238 (-)
G28575 alg10,LOC107726832,LOC107689747,LOC107721156,LOC107666210,LOC107600015,LOC107569225 other downstream 87528 13975357 ~ 13980559 (-)
LOC122343280 NA other downstream 236236 13815574 ~ 13831851 (-)
LOC122343399 LOC107726825,LOC107689735,LOC107584742 other downstream 369372 13692471 ~ 13698715 (-)
G28397 vezt,metap2,metap2a,LOC107755144,LOC107689227,LOC107597031,LOC107667718,LOC107755160,LOC107689230,LOC107597011 other downstream 635384 13411624 ~ 13432703 (-)
tmcc3 tmcc3,LOC107689246,LOC107667715 other downstream 706149 13316932 ~ 13361938 (-)
cerk cerk,LOC107710741,LOC107689729,LOC107552286,LOC107600034,LOC107721152 other upstream 85087 14155492 ~ 14176742 (-)
LOC122342862 celsr1a,LOC107666207,LOC107710744,LOC107569230,LOC107721151,LOC107600014,LOC107689740 other upstream 617468 14687873 ~ 14704622 (-)
LOC122342642 pfkfb3 other upstream 738138 14808543 ~ 14810711 (-)
LOC122342864 rpl34,LOC107566275,LOC107573163,LOC107681344 other upstream 954182 15024587 ~ 15027663 (-)
kiaa0930 zgc:172139,kiaa0930,LOC107601010,LOC107719873,LOC107687566,LOC107699202 other upstream 1531035 15601440 ~ 15611575 (-)

Expression


Co-expression Network