LOC122342452


Basic Information

Item Value
gene id LOC122342452
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26161491 ~ 26163397 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250570.1
AATGGACGAACGGCCAACCGCGTCGCGCTTGAGAATGGacgggagccaatcagagcgcgagctgtccattgttggggagccaatcagagcgcgagctgtccattgttggggagCCAATCCGGTCGCTCGCTATCCATTGTGTTGGGAGCAGACTTTACGCAGTCCTGAGGAAAATTGACAGATTTCAATATCGACAgaagaaaattgcataattcgacaaaATGAGTACCAAGCCAAAGACCCACAAGGCCATGGGTGATGTCGAGTGGATGAACAGGTTGAGGGCTTTTGCAAGCTCTGGTGCATGGCCTTCTGGAGGCAACAGACCAGCACCACGGCAGCGGACGTGGTATGACCTCTACCAGAAGATCACAAAGAAGCTGGCCGGCCATGGACAGGGGACAGCACTCTGGGTAACCCTTATTGGAAATGAGGTTGACCAGATAGTGCCCAACCAATACAAGGGCATTATATACTGCCCCTCTGTAGAGACACTACCAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250570.1 True 503 lncRNA 0.52 3 26161491 26163397

Neighbor

gene id symbol gene type direction distance location
trnak-uuu_68 NA coding upstream 2612 26158807 ~ 26158879 (+)
trnah-gug_14 NA coding upstream 2924 26158496 ~ 26158567 (+)
trnak-uuu_67 NA coding upstream 4738 26156681 ~ 26156753 (+)
trnah-gug_13 NA coding upstream 5052 26156368 ~ 26156439 (+)
trnak-uuu_66 NA coding upstream 6868 26154551 ~ 26154623 (+)
LOC122342360 NA coding downstream 9797 26173194 ~ 26177618 (+)
LOC122343899 NA coding downstream 19838 26183235 ~ 26183375 (+)
LOC122343900 NA coding downstream 22452 26185849 ~ 26185989 (+)
LOC122343901 NA coding downstream 25061 26188458 ~ 26188598 (+)
LOC122343908 NA coding downstream 27671 26191068 ~ 26191207 (+)
trnas-uga_30 NA non-coding upstream 209773 25951637 ~ 25951718 (+)
trnas-uga_29 NA non-coding upstream 211986 25949424 ~ 25949505 (+)
trnas-aga_30 NA non-coding upstream 212332 25949076 ~ 25949159 (+)
trnas-uga_28 NA non-coding upstream 214276 25947134 ~ 25947215 (+)
trnas-aga_29 NA non-coding upstream 214620 25946790 ~ 25946871 (+)
LOC122343906 NA non-coding downstream 4502 26167899 ~ 26168039 (+)
LOC122343909 NA non-coding downstream 7122 26170519 ~ 26170656 (+)
G31403 NA non-coding downstream 272951 26436348 ~ 26436599 (+)
G31404 NA non-coding downstream 280109 26443506 ~ 26443991 (+)
G31412 NA non-coding downstream 315319 26478716 ~ 26478933 (+)
G31384 NA other upstream 347866 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 466110 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 473261 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1393939 24743848 ~ 24767552 (+)
G30882 NA other upstream 1433044 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1134139 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1193415 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1197446 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2043561 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 2055336 28218733 ~ 28221417 (+)

Expression


Co-expression Network