LOC122342580


Basic Information

Item Value
gene id LOC122342580
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26731660 ~ 26732626 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250601.1
GGATGACCAGGTTGAGGGCTTTTGCAAGCTCTGGTGCATGGCCTTCTGGAGGCAACAGACCAGCACCACGGCAGCGGAAGTGGTATGACCTCTACCAGAAGaTTGAGAAATGCCCCCTGCAAGCTCATGGACAGACCACCCTCTTTGGTGGGTCCAAGGCATGCAGTTGTGGATTCCACACCACCAagCCTGCCACTGCTACTTTATCACAGGCCACTGCTGCACCTCCACAATCTGAGGCTTCAGACACGGCTCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250601.1 True 258 lncRNA 0.56 3 26731660 26732626

Neighbor

gene id symbol gene type direction distance location
trnas-uga_106 NA coding downstream 4266 26727313 ~ 26727394 (-)
trnak-uuu_100 NA coding downstream 5763 26725825 ~ 26725897 (-)
trnak-uuu_99 NA coding downstream 7814 26723774 ~ 26723846 (-)
trnas-aga_108 NA coding downstream 8617 26722965 ~ 26723043 (-)
trnak-uuu_98 NA coding downstream 10091 26721497 ~ 26721569 (-)
LOC122342367 NA coding upstream 133147 26865773 ~ 26869148 (-)
flot1a flot1a,LOC107665160,LOC107549850,LOC107752515,LOC107666343,LOC103027319,LOC108433738 coding upstream 676462 27409088 ~ 27415650 (-)
pdk2b pdk2b,LOC107665156,LOC107752527,LOC107549851,LOC107753849,LOC107562510,LOC107666345 coding upstream 1214370 27946996 ~ 27951997 (-)
LOC122343310 LOC107752528,LOC107549854 coding upstream 1233683 27966309 ~ 27969769 (-)
wipf2b wipf2b,LOC107752530,LOC107549849,LOC107562512,LOC107665117 coding upstream 1237284 27969910 ~ 27977175 (-)
LOC122342214 NA non-coding downstream 42208 26688613 ~ 26689452 (-)
G31413 NA non-coding downstream 252727 26478716 ~ 26478933 (-)
G31402 NA non-coding downstream 297874 26428152 ~ 26433786 (-)
trnay-gua_23 NA non-coding downstream 424215 26307359 ~ 26307445 (-)
LOC122342589 NA non-coding downstream 426988 26303662 ~ 26304672 (-)
trnay-gua_24 NA non-coding upstream 2886 26735512 ~ 26735598 (-)
G31425 NA non-coding upstream 169080 26901706 ~ 26901995 (-)
trnae-cuc_27 NA non-coding upstream 206435 26939061 ~ 26939132 (-)
trnae-cuc_28 NA non-coding upstream 220218 26952844 ~ 26952915 (-)
trnae-cuc_29 NA non-coding upstream 225703 26958329 ~ 26958399 (-)
G31400 LOC102197881 other downstream 406424 26324479 ~ 26325236 (-)
G31394 NA other downstream 556411 26173699 ~ 26175249 (-)
G31314 NA other downstream 1170462 25559040 ~ 25561198 (-)
LOC122342407 LOC101068103,LOC105418166,LOC106522608,LOC108412963,LOC105419408,LOC108431938,LOC107395447,LOC106674638 other downstream 1970874 24754056 ~ 24760786 (-)
LOC122342340 NA other downstream 2404397 24323970 ~ 24327263 (-)
G31463 LOC107665166,LOC107752513,LOC107549841 other upstream 633786 27366412 ~ 27367649 (-)
G31467 zbtb22b,LOC107752533,LOC107665126,LOC107666316,LOC107549842,LOC107554346,LOC107753716 other upstream 646433 27379059 ~ 27382827 (-)
LOC122342454 kifc1,LOC107665178,LOC107753731,LOC107666336,LOC107549825,LOC107554333 other upstream 651127 27383753 ~ 27389398 (-)
G31503 pvrl2l,LOC107549846,LOC107665153,LOC107554349,LOC107752518,LOC107753776,LOC107666334 other upstream 806729 27539355 ~ 27615941 (-)
G31508 LOC106519560,LOC107665151,LOC102211354,LOC101487824,LOC102313318,LOC102779181 other upstream 910066 27642692 ~ 27644732 (-)

Expression


Co-expression Network