CI01000004_10944147_11018487 (CTNND2B, CTNND2)


Basic Information

Item Value
gene id CI01000004_10944147_11018487
gene name CTNND2B, CTNND2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 10942377 ~ 11018487 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_10944147_11018487.mRNA
GTTTTTCTGATTGTATATCCTCTCTTCCACACAAAACACATGTGTTCACAGTTGTGCCTGATGTGGTTGCGTAAAAAGGCTCTGTGTCCTGATGCTCATATAGAAGTAATGCCAGTACCAGACCATCCCTCTGACACAGAAAACTCCAGCATGTTGAGCCCGGTACTAAACGCCTCCAACGGAGATGGATCCGAGACGGAGACCACCTCTGCCATCTTGGCCTCTGTTAAAGAACAGATACAAATGGTTTTTGATGGTCACCACACTGCAAATGTGCCGTTGCGCCTCAGTATCACATGGTTTGGCGGACGAGTGGGAGTTGTGGATAGTGGAGCACAGATGGCGTCAGAAAGAGGGGAAGAGTTTAGGAGGAGGCGGAAGAGTGACTGGAGGGCAGTGGTATTTGGCTGGCTGGCTGGGCTTTACACATATGCTCTGACTGCTTTATGTGTGCAGGAGCTGCAATTTGAGCGACTGACGAGAGAGTTGGAGGCTGAGAGGCAGATTGTTGCCACCCAGCTGGAGAGATGCAAACTGGGATCTGAGACCGGAAGCATGAGCAGCATCAGTTCTGCAGATGAGAAGTTTCGCTGGAACAATCAAGATGGACAGAAGGATATAGAGGAGGAGCTCACCACGGGTCTGGAACTTGTAGATTCCTGCATCCGATCTCTTCAAGAGTCTGGTATTCTGGATTCACAGGAATTCACTGCAGGCGAAAGACCAGGCATCCTCTCTCAGAGTGCTTTGCAGCTCAATAATCAAGAGGGCACCTTTCCCTATCCAGTCAGTTACCATAGCAACCAGACCCTGGCCCTCGGCGACCTGTCGGCCTCCCAGCCCCCACGCAGTGGTCAGGTGGGAGGAGCCTTACATAGCTATAATCAGGTGACGTCTAATCGTGTTGCCCAGCTGGCTGCCAGAGAGACAGCCGCCCGGGCCCATTCTCGAGACTCCTTTGCCCAGAGTCATGGCAGTGCATTCCACATGCCTGACGATCTACCAACAGCCTATGCTTTGGGCTCCCCCTCCAAACTGCAGAGGCTGGGCTCAGCCTCCGACATGCCCAGCTACGCCACTCTGGCGCGGGTGTCGTCACCCAAGCAGTCCCCGAGCCGGCTCGCCAAGTCCTACAGCACCAGTTCTCCCATCAACATGGCGGCGGGAGGGTCCTCTTCACCGCTGCACTTGGCCGGAACGGGCAATGCCTCCAGCTCGTCTCCGCTACACCAGCTCAGCGCTGCAGTAGGAAGCTATGCCACTCTGTCCCCCACCAAGCGAATGCTGCACACCACTGATCAGTACAAAATCTCTCATGATCTGTACGCCAACGCCACACTCCAGAGACCTGGCAGTCTGGCAGGTTCCAGGGGTTCGTACAGCAGTCAGCACAGTCACCTGGGCTCGGAGCTCAGACCCCTGCAGTCTCCTGAGCACCACATCGACCCCATTTATGAGGACAGAGTCTATCAGAAAGCCCCTCTGAGAAACTTCAACCAAGGCCAGGGTAAGATGGCAGACATCAGGCTCTCTAACAATTTAAAGTCAACAACAAAATCTTTTCATCTAGAGCATAATGACTCAGATCCAATGAACCAGTTTTGTGACCAGGTCCTGAACTTTCTGCTCTGTCCATACTCTCCTGTTGTAGCCCCTTCCTCTCCCGGTGTTGACTCCATACCCTTGCAGCGCACGGGAAGCCAGAACGCCACAGGAACATTTCCCCGTTCCGGCTACGCCACTGGCCCTGGTGCCTCCACTGCTGACTATGCCAACCCCTACCGTACACTACAGTTCTGCCCCTCCACAGACTCACCCTACAGCAAATCGGGGCCTGCTCTGCCCCCGGAAGCTACGCTGGTCAGGTCGCCCTCTGTGGACAGCATCCAGAAGGACCCCAGGGAATTTGGCTGGAGGGATCCTGAACTGCCGGAGGTCATCCAAATGCTGCAGCACCAGTTTCCATCAGTACAGTCCAACGCTGCCGCCTACCTCCAGCACTTGTGCTTTGGAGACAACAAGATCAAATCAGAGCCAAGGAAACTAACTAGTGGCAGGAAAGTGAGAACAAAGGAAACAGGTACAGGAACTAGAACTAAACCAAAACAGAACATACATGTGACATGGGGATTTCAGCTTCATTTGAATTTCCATGCTGGTTCAGGCTGGTTTGTTTGTTTGTTTACAATACGAAGGCAGGGTGGGATTCAGCTGCTGGTGGACTTGCTGGATCACCGTATGACTGACGTGCACAGAAGTGCTTGCGGCGCACTTAGGAACCTGGTTTATGGCAAGGCCAACGATGACAACAAGATTGCCCTGAAGAACTGCGGTGGGATCCCTGCACTCGTGCGACTCCTGCGCAAGACAACAGACGTGGAGATCAGAGAGCTGCTCACAGGTGTGCTGTGGAACTTGTCTTCATGTGATGCTCTGAAGATGCCCATAATTCAGGATGCTCTGGCAGTGCTGACCAACACGGTCATTATTCCTCACTCGGGCTGGGACACCTCACCCCACCAGGACGACCGCAAACTGCACCTGCATTCCTCACAGGTGCTCCGCAATGCTACCGGGTGCCTCAGGAATGTGAGTTCAGCCGGAGAAGAGGCCCGCCGAAGGATGAGAGAGTGTGAGGGTCTGACTGATGCGCTGCTCTATGTCATCCAGACAGCCCTGGGCACTAGTGAGATCGACAGCAAGACCATCGAGAACTGCGTGTGCATCCTGCGGAACCTGTCGTACAGGTTGGCGGCAGAGACGTCTCAGGGGCAGCAGATGGGATCGGAGGAACTGGACGGGGTTCTGTGCACCGATGCCAGCGGGAAGGATGCGGAGAGCTCCGGCTGCTGGGGCAAGAAGAAAAAGAAAAAGAAGAGCCACGATCAGTGGGATGGTGTTGGGCCTTTCCCGGACTCCAGTGACCCTCCAAAAGGACTACAGATGCTGTGGCACCCATCCATAGTGAAACCATACCTCACTCTGCTGTCTGAGTGCTCGAACCCGGACACACTGGAGGGAGCGGCTGGGGCTCTACAGAACCTGGCAGCGGGTAGCTGGAAGTGGTCGGTGTACATCCGTGCTGCGGTTCGGAAAGAGAAAGGGCTGCCCATTCTGGTGGAGTTGCTGAGAATAGACAATGACCGGGTGGTGTGTGCCGTGGCCACAGCTCTCCGAAACATGGCCCTTGATGTCAGGAACAAAGAGCTCATAGGCCTCTGGTCGTCACACCTCCTCTCTGACTTTTCTTTTCTGTTCATCTCATCCATGCAACCTAAAGGCAAGTATGCCATGAGGGATCTGGTCCATCGGCTACCGGGGGGCAACAATAACAACAGCACCGGCACCGGCGGCAGCAAGAGCATGTCCGATGACACCATTACAGCGATCTGCTGCGCTCTGCATGAAGTCATCACCAAGAACATGGAGAACACCAAGGCCCTTCGTGATGCCGGAGGCATTGAGAAACTCATCGGCATTGCCCGCAGCAAAGGAGACAAACACACACCGAAGGTGGTGAAAGCAGCATCTCAAGTCCTCAACAGCATGTGGCAGTACAGAGATTTGCGAAGCCTCTATAAGAAGGACGGCTATTCTCAGTATCACTTCATTGGCTCCTCATCTACAATTGAGAGAGACAGACAACGACCTTATTCCTCCTCTCGCACTCCATCTATCTCTCCTGTGCGGACTTCGCCCAATAATCGATCAGCAAGTGCCCCCACCTCCCCTCGAGAAATGATGAGCTTGAAGGAGAGGAAGACAGACTATGAGACAACTGGAACCAATTCTGGTTACCATGGAAACAAGGGCGAGCACACCTCCAGAAAAGATGCGATGGCAGCTCAAATCTCAAGTGGAACATCTACACTGTTCAGAGGTGCTTACATGTCTCCTGGTGATGACATCAAACATAACCAGGTCTCCGCTCAAGGCAACCCTCCAGAGGCCTACCCTCCCTTCCAAACTCCCCCAGGAGCCAACTTCGAGGAGCCGTATTATGAGGACCAAGCGCATAAACGCCCCCCACCTGCCGCCGACGGCACCATGCACCTGGGACTGAAGTCCACGGGGAACTACGTGGACTTTTATTCGGCATCCCGCCCATACAGTGAACTCAACTACGAAACGAGCCACTACCCTGCCTCGCCGGACTCCTGGGTGTAGAGGCACAGAGGCAGGCTGGAGGCTGGCCTATGGACACCATACACAGAGACCAGCCCAGCATGTGCATGAACACTTGTAGACATCTCACACGCGTAAACCTTCAGTTCGGTTCACTGCTTGCACCACAGTGGGCTGCCACTCGGCCAGTAAGCGAGGTTAGGAAAGTGCTTGAAGAGAGAAGTTTTTAGGAAAGAAGCTCAAGGAATGTGTTTTACCAAATGGACCACTTGAACTTTCGTGTTTTTCGAAGCAGTGGAGGGAATCGAAAGGTAAACGGGAAAGTGGAAGATGCTGTATGTGGCGCAGAGGTGGGACAGTTACGTGAAGCACAAAAATCAACATTCGACACAAGCTAAGGAAGTAGTTTTCACACATTTTTTGACATTTCTTTATGTTAAACCATGCTTTTTATGGAGTGCTCTGTTACACTCTTAGCCTTTATATATTTTATTTGATTTCTTTTTATTATTTGCTTGTTTTTGTACCTCCTTTTTAACTTCTTAAGTCTGGTGTAAAGTACTTGTTGTATATTACAGATGTAGATACAAGGTGCATTGTGTATATTACGCAAAGACTACTGTGTCCTCCCATGTGGCTCAATATATCATTTTATTTTCCTGTATTTTAAAAGAGAGAGGAAAATACAGTCACTGAACTCCAGAGTCCTGTTCTATGGGTAAGAAAAGCATATAATTCAGAGGTGTCGTTTGCTCTAATGTGTTTTTTCCCCGTTTTTCTGAGAGGAAACTACTAATAACTGACGACAGAGCATCACTGCCTGGACAGAGTTTACCACCAATAATAAGAACATTTTCAGGCCTATCTGTCAGTTTGTTTTCTTTTTTTCCCAACTGTACTGACGTGAAGACTGGTCATTCCACAAGCCATCGAGTGATCTGTGCTTAGTTATGTGCCAAATGTGGTAATCCCTGACCCAAGGGGTACTATAGAGCTGCCGTTGAAGTTACATTTAACGACAAGTCACTGGTTCTATCGACGCCTGTTTGTAAATGCTTTTTTTAAATGTGTTTCAACAGCATTCACACTGTAACAAGAAATGGAGGGACACGGTCTTTGACAGCTACTTCCCCTCCAAAGATGTACAATTAGTTGACGCTGTGTTGTAAAATAGACATTTGCAAAATCTGCTTTTTTCTTCCAGAAAAATCAGTGGTTCTTAAGCTCATCGTAGACAAATCTGTCAATAGAGTATGGATATATATATTATATAAATACAAAATATATATATACTTTTTATGTGCAGATGTGGATGTCACCTAACGCAGAAACATTGCAAGGAAAAAATGCTAGTTAAAAAAAGCATAGGGTTTTGTTCACCTTAATTTCTAACCAGATGTTGACCTCCTGTTGTCATGTTGTTGCTGTGTAAAAGAGGCGAGACCAGGGCTCGGTGAGGGCAGATGTGATAAAGCTTCTAATATTGACTTGAAAAGGTGCTAAAACAATGCTCTAACACCTTTTGGCCTATGTTGCTACCTTTTATTAATGCCTTTTGAATGTTTCATGTCCTTAGTAAAATGGATGCCACTAAAATTAATAGCTTTGATCTAGAAGGAGAGCTGTGCGTATAGACACACCTCTTGATTTTCATTTTTTCTCGCTTAGGTAATTGCCTATACCTAATCTCAGGTCATCTTATTGCAAGAGAAAATGGGTGAACATTCCTCTATTGACTGAACGGAGAACAAAGAATGACACAACCCTATAATTTTTATTATTTTTTTGTGATTTTCCAACCTTAAAATTAAA

Function

symbol description
ctnnd2b Predicted to enable cadherin binding activity. Acts upstream of or within neuron migration. Predicted to be located in cell junction. Predicted to be active in several cellular components, including adherens junction; nucleus; and postsynaptic density. Human ortholog(s) of this gene implicated in anxiety disorder; major depressive disorder; and schizophrenia. Orthologous to human CTNND2 (catenin delta 2).
ctnnd2 Enables beta-catenin binding activity. Involved in dendritic spine morphogenesis and regulation of canonical Wnt signaling pathway. Located in perikaryon. Implicated in anxiety disorder; major depressive disorder; and schizophrenia.

GO:      GO:0016337, GO:0001764

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_10944147_11018487.mRNA True 5937 mRNA 0.50 26 10942377 11018487

Neighbor

gene id symbol gene type direction distance location
CI01000004_10884499_10886045 CBLN2A, CBLN2, CBLN2B coding downstream 56332 10884426 ~ 10886045 (-)
CI01000004_10847650_10847940 NA coding downstream 94382 10847557 ~ 10847995 (-)
CI01000004_10788659_10809214 JPH1B, JPH1 coding downstream 132572 10788659 ~ 10809805 (-)
CI01000004_10766385_10766860 TCEB1B, TCEB1, GM14517, TCEB1A coding downstream 175517 10766340 ~ 10766860 (-)
CI01000004_10757852_10760211 NA coding downstream 181235 10757543 ~ 10761142 (-)
CI01000004_11043026_11046108 NA coding upstream 24393 11042880 ~ 11046108 (-)
CI01000004_11052319_11059170 RP1 coding upstream 32907 11051394 ~ 11059170 (-)
CI01000004_11073846_11086948 NA coding upstream 55192 11073679 ~ 11086948 (-)
CI01000004_11172493_11174547 MYL12.2, MYL12.1, MLRN, MYL12A, MYL9 coding upstream 153728 11172215 ~ 11175867 (-)
CI01000004_11232801_11249384 NA coding upstream 212956 11231443 ~ 11249384 (-)
G31466 NA non-coding downstream 7670 10934298 ~ 10934707 (-)
G31457 NA non-coding downstream 11573 10930308 ~ 10930804 (-)
G31452 NA non-coding downstream 14272 10926284 ~ 10928105 (-)
G31454 NA non-coding downstream 20253 10921435 ~ 10922124 (-)
G31456 NA non-coding downstream 22736 10916899 ~ 10919641 (-)
G31484 NA non-coding upstream 44183 11062670 ~ 11067886 (-)
G31486 NA non-coding upstream 50738 11069225 ~ 11069723 (-)
G31542 NA non-coding upstream 169995 11188482 ~ 11188976 (-)
G31580 NA non-coding upstream 312824 11331311 ~ 11331569 (-)
G32059 NA non-coding upstream 486153 11504640 ~ 11504863 (-)
G31203 NA other downstream 191736 10746437 ~ 10750641 (-)
G30316 NA other downstream 1535456 9377937 ~ 9406921 (-)
G29746 NA other downstream 2584250 8354498 ~ 8358127 (-)
G29656 NA other downstream 2976877 7964364 ~ 7965500 (-)
G29388 NA other downstream 4310470 6631293 ~ 6631907 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 388978 11406957 ~ 11412907 (-)
G32150 NA other upstream 758032 11776519 ~ 11780951 (-)
G32207 NA other upstream 1357681 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 3532313 14541515 ~ 14551352 (-)
G33746 NA other upstream 3550306 14568793 ~ 14569264 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location