CI01000004_11043026_11046108


Basic Information

Item Value
gene id CI01000004_11043026_11046108
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 11042880 ~ 11046108 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_11043026_11046108.mRNA
ATGGAGCAGGAAGAACAGATTGAGAAAGAAAACGTTACAATGACTATTGATATTCAGTATTTGATTGATACTAGGGTAAATGGGGCAAAAACATTTTACCAGGAAAAGAGTGAAAAAATGTCAGGCATGATGATAAACAACACCAGAAACCACACTGGCATGCCAGAGGGATTCAGAATTTCTCTTCTGGTCTTATACTCATTCATCTTGCTTGGTGGAACTCTTAATGTTTTACTAATGTCCTGTATGCTACAGTCCCAAAAACGTCTCTCTTACACCAAAGTATCTGTGATAAACCTCATAGCAGTGCACTCCGTTTTCCTTCTCACGGTGCCCTTTCGCATTTACTATTATGCTTTTAATGAAACCTGGATTCTGGGCTTGACTTTCTGCAAAATTGTCAGTCTTATGATTCATGCCCACATGTATCTTGCATTCATCTTTTATGCCTTTCTTGTTATTGTGCGTTATGTGGAGCACTCTGATCGGCAGCAAAAGCTACAGTTTCATCGTATCCTTTATGCCACGATTCCAAGTGCAGTCATCTGGTTGGTCATATTCGGCTCTATATTCCCACCAACTATGGTTAAATATGGAAACATGCAGAATGATTCCACTCAGTGCTTTCATTTCGGTCAGGCTCTCAAAAGCCCTGCTGTGAAGATGTTAAACTATGTTATTTGCACAGTAGTGATACTGATTTGGACTGTGCTGGCATTTTTCCAACTTTATTTTCTGCTAAACGTGATTAAGAAACATGGAAGGGCCACACGTCAACATCAAGAGTTCTGGGCACAAATGAAAAATTTTGTTTTCCTGTCTGTTATGTTTTTTTGTTTTGTGCCCTATCAAGGATTCAGAGTATATTATGTGACTGATTATGGGAAGACTGAAAAAAATACTCATATAAATGAAGTATTTCTTGCTATCACTGCTTTCAGCTGCTTTGATATGATTGTTTTTGCTGCTAGAGATATATGCAAACATAAAAATTCAAGGAGATGGTTTTGCTGTTTATAACAACTATGTTGACTTAATTTTGTTTCTGTATTGTTATTGATATAGGGAATTGATTTGCATTTTCTTTTATTTGTTTTTGTCTTATGCTTTTGTGCCTTATAAGCTTAAAACAATTGTCTTGCATGACAGAATGTTTGGAAAATAAA

Function

NR:

description
Probable G-protein coupled receptor 141

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_11043026_11046108.mRNA True 1166 mRNA 0.36 4 11042880 11046108

Neighbor

gene id symbol gene type direction distance location
CI01000004_10944147_11018487 CTNND2B, CTNND2 coding downstream 24393 10942377 ~ 11018487 (-)
CI01000004_10884499_10886045 CBLN2A, CBLN2, CBLN2B coding downstream 156835 10884426 ~ 10886045 (-)
CI01000004_10847650_10847940 NA coding downstream 194885 10847557 ~ 10847995 (-)
CI01000004_10788659_10809214 JPH1B, JPH1 coding downstream 233075 10788659 ~ 10809805 (-)
CI01000004_10766385_10766860 TCEB1B, TCEB1, GM14517, TCEB1A coding downstream 276020 10766340 ~ 10766860 (-)
CI01000004_11052319_11059170 RP1 coding upstream 5286 11051394 ~ 11059170 (-)
CI01000004_11073846_11086948 NA coding upstream 27571 11073679 ~ 11086948 (-)
CI01000004_11172493_11174547 MYL12.2, MYL12.1, MLRN, MYL12A, MYL9 coding upstream 126107 11172215 ~ 11175867 (-)
CI01000004_11232801_11249384 NA coding upstream 185335 11231443 ~ 11249384 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 coding upstream 360849 11406957 ~ 11412907 (-)
G31466 NA non-coding downstream 108173 10934298 ~ 10934707 (-)
G31457 NA non-coding downstream 112076 10930308 ~ 10930804 (-)
G31452 NA non-coding downstream 114775 10926284 ~ 10928105 (-)
G31454 NA non-coding downstream 120756 10921435 ~ 10922124 (-)
G31456 NA non-coding downstream 123239 10916899 ~ 10919641 (-)
G31484 NA non-coding upstream 16562 11062670 ~ 11067886 (-)
G31486 NA non-coding upstream 23117 11069225 ~ 11069723 (-)
G31542 NA non-coding upstream 142374 11188482 ~ 11188976 (-)
G31580 NA non-coding upstream 285203 11331311 ~ 11331569 (-)
G32059 NA non-coding upstream 458532 11504640 ~ 11504863 (-)
G31203 NA other downstream 292239 10746437 ~ 10750641 (-)
G30316 NA other downstream 1635959 9377937 ~ 9406921 (-)
G29746 NA other downstream 2684753 8354498 ~ 8358127 (-)
G29656 NA other downstream 3077380 7964364 ~ 7965500 (-)
G29388 NA other downstream 4410973 6631293 ~ 6631907 (-)
G32150 NA other upstream 730411 11776519 ~ 11780951 (-)
G32207 NA other upstream 1330060 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 3504692 14541515 ~ 14551352 (-)
G33746 NA other upstream 3522685 14568793 ~ 14569264 (-)

Expression


Co-expression Network