LOC122343163


Basic Information

Item Value
gene id LOC122343163
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21163756 ~ 21167242 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250681.1
GGATACGCCGGGAGTTTCCTGCGCTCGCCTCCAGAGACACAGAGATGGCGGGGTCACTCGGCTGAGATCGTCCGGACAGGGGTTTAATTGAAGATGTGTTGTCTGTTCATGATCATACAGTCTATAAAACAGagtttattcagtgttttctgGGGAAATCACGGCCCTGCTTTAAATCCGtgttttgacacacacacaaagcaataTCTGTAATCGTGTTCTGAATGCTGTACGGCTTTGAAGACGTGGAGGTGATGTTTATTTTGGGGAGGAGTGTCTCTTTAAGGATGTGTCTGTCGTGATAAACACAGGAGGAGAGAGAGTTTGGTCCCTCTTATTTCTCCCACCTTGACTTTACTTCTTCATTttgatatgattttaaatgctgTAGTTTATAGTTAGTTTATCTATTAATATCTATCTCTTTATATATCTATCCTGTAGCTAAGTCCcagatttcacacacacacacacacacacacacgcacgttatataaatataaggaCGATAATCATAATTACAATGAAAGGTTTAggtaaaaactaattatataatatttatataataatctaaaaaacgTTTCTTAACATTTCTTTATCATGGTAATTTATACGCAGTTTTAAATGAACgtgctgtttaatataaaacacgTTGAAGGCTGACTTCCGCTCAGACCGGAAGCGCGAGCTTTAGCGCTTCCGCTGCTTTCGGTTGTGGTTCGCTTCTAGCGGCTTTCTGCTGAAGaaagAACTAGAGAAAGCCTCAGAACGAATGGAGCTCTCAAGGATTCGTCGGTCTGGGCCGTACACGGGATAAAAGACAGGATCCCTTCAAGTGAAGGAGTCCTCATATCAAGATCAGATATTTATTCTCATCTCAAACCCTCGCTGAAGAGACCGAGGCGCCGTTATAAAGATGGCCTTTATcaaggaggagagagaagacGTGAAGATCGAAGATGAACCAGAAGATCTTGAGGAGAAACGAGCGGAGATATCGTTTCTTAAAGAGGAGCGAGGAGACGTGAAGATGGAAGAAACAGACCTGATGACGCTGAAAGAGGATAGACAAGAATCCAAAGTAATAGAAGAGAAAAATCAGTTTGACAAACATAATGATTTCATGACTGGAGAAGAATCTAGTTCTTACTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250681.1 True 1154 lncRNA 0.41 3 21163756 21167242

Neighbor

gene id symbol gene type direction distance location
LOC122343080 NA coding upstream 2731 21156073 ~ 21161025 (+)
LOC122342972 NA coding upstream 51428 21093453 ~ 21112328 (+)
LOC122342958 LOC107566977,LOC107677745 coding upstream 96906 21055492 ~ 21066850 (+)
LOC122343014 NA coding upstream 119738 21039780 ~ 21044018 (+)
LOC122342283 NA coding upstream 142884 21018152 ~ 21020872 (+)
LOC122342285 LOC107725790,LOC107656690 coding downstream 7 21167249 ~ 21167961 (+)
LOC122342287 LOC107722090,LOC107694763,LOC107585758,LOC107668179,LOC107574018,LOC107573797,LOC107697810,LOC107566573 coding downstream 10313 21177555 ~ 21182761 (+)
LOC122342986 LOC107563545,LOC107667978,LOC107741456 coding downstream 14995 21182237 ~ 21186135 (+)
LOC122342966 LOC107563536 coding downstream 55328 21222570 ~ 21230104 (+)
LOC122342289 LOC107685875,LOC107749047,LOC107728228 coding downstream 125070 21292312 ~ 21305636 (+)
LOC122343205 NA non-coding upstream 30154 21131154 ~ 21133602 (+)
LOC122343166 NA non-coding upstream 37336 21126085 ~ 21126420 (+)
G30056 NA non-coding upstream 45234 21117661 ~ 21118522 (+)
G30024 NA non-coding upstream 187978 20910154 ~ 20975778 (+)
G30077 NA non-coding downstream 80945 21248187 ~ 21248425 (+)
G30090 LOC107749046 non-coding downstream 108868 21276110 ~ 21301007 (+)
G30085 NA non-coding downstream 144313 21311555 ~ 21337024 (+)
G30104 NA non-coding downstream 166003 21333245 ~ 21721910 (+)
G30110 LOC107718524,LOC107563870 non-coding downstream 202180 21369422 ~ 21374537 (+)
G30058 NA other upstream 20925 21118562 ~ 21142831 (+)
G29961 NA other upstream 456910 20696672 ~ 20706846 (+)
G29921 NA other upstream 794940 20367675 ~ 20368816 (+)
LOC122342270 NA other upstream 817032 20344346 ~ 20346724 (+)
LOC122343063 NA other upstream 1120303 20037933 ~ 20043453 (+)
LOC122342286 LOC107578117 other downstream 1951 21169193 ~ 21174340 (+)
LOC122342301 LOC107563870,LOC107718524,LOC107683800,LOC107564010,LOC107563545 other downstream 201401 21368643 ~ 21761181 (+)
G30119 NA other downstream 220951 21388193 ~ 21630120 (+)
G30115 NA other downstream 472298 21639540 ~ 21641756 (+)
G30218 LOC106676322,LOC106676931,LOC106676323,LOC107752219,LOC106675762,LOC106674878,LOC106676183 other downstream 1064228 22231470 ~ 22231924 (+)

Expression


Co-expression Network