LOC122343164


Basic Information

Item Value
gene id LOC122343164
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 18903235 ~ 18907824 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250682.1
ttggactgGCGCACTGACGTCATGACGCTGCGCCCCACCCCACTGTAATTCGGCTGAGGAAAGATTTGcgtttttaagtatttatagtgttttatcGTTTCGAGACATTTTCTCTCACACTCTTCTGAACTCAGTGCAACTTCAGTGCAAATACTTGGCAAAACGATTCAGTTTCGTTTGGGTTCAGAGCGACGTCGCGCGCTTAAACAACTCACAACTAACTATAACGCGAACGTTTACAACAAACTACAAAATGTTCAGAGGTTTAGTTTGCATTTTCTCATGTCAGTTCTTATCTTAAACAGGACCCGGCGAAACGTGTCACTCTTAAAAAGATGGTGTtcattaaagaggagagtgaagacgtgaagattgaagaaacatgaagaaactgaggaacaaacagACGTGACGTCATAAGAAAGCGCCGCGGACCGGCAAAACAAAGATCTAATGGCACCAAAGGAGGAGAAAGTAGTAGTTAATGAAAACGAAGAGGAAGATCAATATGAGAATCTTCATGATTACCAAACTGGAGAAAAACCATCGTCTCCGACTGAAAAGACGTCCACACGAGAAAGTCCACACGCTTTCAGTTTGAAAGAGTTTCAATCAACAAAACTCTAGAGACCACATGCAAATTCACTCTGGAAAGAAGACCTTCACCTGCGAACAGTGTGGGAAAAGCTTCAGTCAAAAAGCATGCTTTAACAAgcacatgagagttcacaccggagagaaacttTACAAATGCGGAAAGAGTTACGCTCAACAAGGACACCTTGATATTCACACGAGaactcacaccggagagaagcctttcgTATGCCAGTGCTGTAGAAAGAGCTTTTCTCATCAGGGAAACCTAAGCAGTCACATGAGAACTCACACGGGAGGGAATTCTTACATGTGTCTTCAGTGTGGAAGAAGTTTCGGTCAACGTGGATAATCatctattactattactatcatctatcatctatATGCAAGGTGATATGCAAGGTGTTCCCAGTTCTGGTTGAGCTAATTAATGCAACCTAATAATTTGGGCTGCACGATAGTGTGATGTGCACATCTATGTttgaaatttgtttatttttgtaaagcttttcagtactttttgtttgttttgtcatataacagaaatatatatttttctaatattgtGCAGCCCTAGGGGCAAATTTcctttaatagattttaataaCAGAGTATTTAAGTTTAAGACAGGATAAAGAGATGAgtctttaatttagatttaaacaGAAAGAGTGTGTCTGTCTCCTGAAAAATGTTAGGTAGATTGATCCAGGGGGAGCTGAACAGGAAAAAGATCTGCCACCCCCAGATGATTTTGAtgttctaggtattatcaaatgaccAGAGATTTTAAGAACAAGGAATGCAATATGTGCTCACTCGAATACAGAGGtcctaaaccattcagggctttatacgTAATtagcaagattttaaaatgtatacaatgtTTAATAGgaagccagtgcagtgttgacagaaccgggctaatatgatcatacttcccaATTCTAGTAAGAACTCTAACTGCTGCATTTTATAACTTATTTAGCAccaaataatgattaaaataatctaTTACTATTTAGattattacaataatctaaaCTTGAGGTCATGAGCAAATGAATGATCTTTTCTGCATTAAGCATAGGTTATAatttacatctatatatatatatatatatatatatatatatatatatatagatggaaTACTAAGGTTTTGCAAATGCTTGAAACATAGTTTTGAAGGAAATATCAAATTGCATGCCTAGGTTCCAAAATAACTGACAAGAGCAGTGTTATACATTGTACAAGTGTTTTACTACAAGTAAGAAATTAATAGTCATCTAGTTTTTAATGTCTGATTCCATTAGTTTTGCAGATCGGTACGTTTCATTGGGCACCAAAGAAATATGGAGCAGAGTATCATCAGCTTAGCAATGAACGCAGAAACATAGTTTCGAAAGGACTACCATGGCCTATGAACCTCAGATGTTCCACACCAGACTGTGAAGTCACTGTGGTAAAGAAACAAGACATTTCAAATGACAGTacagctttttgttttcattagtggtgcttgcctaaAGCGAATATCACTATTTTGCTATTTTCAAAAGTGAGGTGCACATTTTCGAAAATCTTAGTATAGAACTGATCGCACTTCTAACACCACTAGTAATTTTTTCTAAACCTGATCTCACgattatattgtaaatgtaaatattttcattctaCATAATCACTGTTTCAGAACACAAGAACATTGTTATTTGTATCGAGAACATTTTGGTGTTTTGGCTTAATCGCCAAAACACAACAATAAGAACTTCTTCCAACTTAGTACTTTTAACAGTTAATTCAGTAGCAAATAATACAAGGTACATGTTTCAAATCAACCTTAGTGCTAAATGGGTGTTACTGTACTGTTAAACCGTACATTACACAGTCAGACAAACTTACAAAAgtgataaaaaacacattaaaagtaAGTTAGGGCCAGAGTGCAAGGCAGAACAGAAGAACCAGATACTGGCAGGCTTCGCACCTGAAAGCAAACCTGTGTTTAGGAAAGATGGAGACATGGAAATAAGCAAATTTTAAACCTGTTGTGACAAGCCAGCCCTTAGGCTTGCTCTGAGACGTGACCTGTTTGATGGTGAGCATCTTGAACTTGAACTCAAATTACTGAGCTGTTCAGCTGATGCTGATCTGAAACAGGCCGCAAGTCCATATTCTTCTTGGAAATAATGAAGTACTGTAGAACCCTGCTTCTCTTTCGagaggagggaccacctcgatggcctccttcaGCATTTATTACTTGTTCCAAAACCCGAGCTTGCTCGTGACCCTCCACAGTGTAAATGATCCTGTTAAAACGTGGTTGAGGAGAACCAAACTGATTTCTGTAACCCCTTTCTACATTCTTTTTGGCGGACACTGGGATGTGTACTTACTAGCTATCACTGTGCCCTGAAGCACCTGTTGAATTAAAGAGGCTGGCCAAATGCAATCTTGCCCATGATCT

Function

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250682.1 True 3076 lncRNA 0.38 4 18903235 18907824

Neighbor

gene id symbol gene type direction distance location
LOC122343078 LOC107730199 coding upstream 5445 18894901 ~ 18897790 (+)
LOC122343055 LOC107554755,LOC107730198,LOC107663244 coding upstream 33452 18865853 ~ 18869783 (+)
LOC122342961 NA coding upstream 70642 18823925 ~ 18832593 (+)
LOC122343011 NA coding upstream 88641 18810860 ~ 18814594 (+)
LOC122343102 LOC107747636,LOC107554732 coding upstream 93272 18805450 ~ 18809963 (+)
LOC122342974 NA coding downstream 1092 18908916 ~ 18915022 (+)
LOC122343048 LOC107698963 coding downstream 10776 18918600 ~ 18922510 (+)
LOC122343092 NA coding downstream 25883 18933707 ~ 18937665 (+)
LOC122343037 LOC107698808,LOC107743352 coding downstream 42903 18950727 ~ 18953599 (+)
LOC122342236 NA coding downstream 52838 18960662 ~ 18962974 (+)
G29633 NA non-coding upstream 87957 18814883 ~ 18815278 (+)
G29627 NA non-coding upstream 117989 18785045 ~ 18785246 (+)
G29600 NA non-coding upstream 238152 18662860 ~ 18665083 (+)
G29591 NA non-coding upstream 299919 18600428 ~ 18603316 (+)
LOC122343196 NA non-coding upstream 309119 18591447 ~ 18594116 (+)
G29777 NA non-coding downstream 24495 18932319 ~ 18932690 (+)
G29797 NA non-coding downstream 59563 18967387 ~ 18967714 (+)
G29803 NA non-coding downstream 137886 19045710 ~ 19053414 (+)
G29809 NA non-coding downstream 171944 19079768 ~ 19080189 (+)
LOC122343175 NA non-coding downstream 461947 19369771 ~ 19371889 (+)
G29642 NA other upstream 16833 18883179 ~ 18886402 (+)
G29545 NA other upstream 441918 18436460 ~ 18461317 (+)
G29526 NA other upstream 602046 18300415 ~ 18301189 (+)
atp5mj NA other upstream 1862405 17038419 ~ 17040830 (+)
G28982 NA other upstream 2428854 16473898 ~ 16474381 (+)
G29814 LOC107660256 other downstream 382396 19290220 ~ 19342911 (+)
G29835 NA other downstream 823438 19731262 ~ 19786128 (+)
LOC122343071 NA other downstream 837910 19745734 ~ 19750074 (+)
LOC122343063 NA other downstream 1130109 20037933 ~ 20043453 (+)
LOC122342270 NA other downstream 1436522 20344346 ~ 20346724 (+)

Expression


Co-expression Network