LOC122343167


Basic Information

Item Value
gene id LOC122343167
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24212067 ~ 24215572 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250685.1
GTGTGTTGCCAGTTTTAGAGGTTTTGGATAATCCTGTGATTACTCCTACTTCAGCAGAATTGACTCAGAGATTTCCAGAAGTTTTCCCAGCGTGTGTCCTGACTCGGTCTCAGACGAAGAGGATGGGAACGGAGTTTACACTAGATGACACCTTCATGTGCACTGATCATCCAGTTCAAGTTGATGTGGAGTCTGTCAGTGTCAAAGAGCATCCATGCCAGGAGTCAGAATCAGAACAGAGGTGGATGCTAGTGCCGTTGGAGCTGGTGCTGTGCTCTTACAGGAAGATAAAGAAGgtttcttTATTGGTTCGCCTGACCATCTGGGAGGATCTGGATGTCCAATC
>XR_006250686.1
GTGATGTTTTGCCTTTCTCCAAGGAGTCTGGTTTGGATTCCAGCATTTTAGTGCAAGCAGAATTGACTCAGAGATTTCCAGAAGTTTTCCCAGCGTGTGTCCTGACTCGGTCTCAGACGAAGAGGATGGGAACGGAGTTTACACTAGATGACACCTTCATGTGCACTGATCATCCAGTTCAAGTTGATGTGGAGTCTGTCAGTGTCAAAGAGCATCCATGCCAGGAGTCAGAATCAGAACAGAGGTGGATGCTAGTGCCGTTGGAGCTGGTGCTGTGCTCTTACAGGAAGATAAAGAAGgtttcttTATTGGTTCGCCTGACCATCTGGGAGGATCTGGATGTCCAATC
>XR_006250687.1
GTGATGTTTTGCCTTTCTCCAAGGAGTCTGGTTTGGATTCCAGCATTTTAGTGCAAGAATTGACTCAGAGATTTCCAGAAGTTTTCCCAGCGTGTGTCCTGACTCGGTCTCAGACGAAGAGGATGGGAACGGAGTTTACACTAGATGACACCTTCATGTGCACTGATCATCCAGTTCAAGTTGATGTGGAGTCTGTCAGTGTCAAAGAGCATCCATGCCAGGAGTCAGAATCAGAACAGAGGTGGATGCTAGTGCCGTTGGAGCTGGTGCTGTGCTCTTACAGGAAGATAAAGAAGgtttcttTATTGGTTCGCCTGACCATCTGGGAGGATCTGGATGTCCAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250685.1 False 346 lncRNA 0.47 3 24212067 24215369
XR_006250686.1 True 349 lncRNA 0.48 4 24212067 24215572
XR_006250687.1 False 346 lncRNA 0.47 4 24212067 24215572

Neighbor

gene id symbol gene type direction distance location
LOC122343128 LOC107728228,LOC107569032,LOC107685875,LOC107705465,LOC107574018 coding downstream 282533 23816849 ~ 23929534 (-)
LOC122343107 LOC107566978,LOC107575457,LOC107561645,LOC107655025 coding downstream 484149 23725752 ~ 23727918 (-)
LOC122343073 NA coding downstream 952748 23256365 ~ 23259319 (-)
LOC122342325 LOC107741456 coding downstream 961453 23240075 ~ 23250614 (-)
LOC122342324 NA coding downstream 974987 23230042 ~ 23237080 (-)
LOC122343156 LOC107674852,LOC105007321,LOC107551422,LOC103361099,LOC107732279,LOC107677819,LOC107725800 coding upstream 49777 24265349 ~ 24266607 (-)
LOC122342338 NA coding upstream 97270 24312842 ~ 24319112 (-)
ckap4 NA coding upstream 261424 24476996 ~ 24479914 (-)
LOC122343108 LOC107677819,LOC107725800 coding upstream 269790 24485362 ~ 24492499 (-)
LOC122342346 LOC107581033 coding upstream 326566 24542138 ~ 24544170 (-)
G31088 NA non-coding downstream 84159 24126947 ~ 24127908 (-)
G31090 NA non-coding downstream 86406 24122812 ~ 24125661 (-)
G31082 LOC107710764 non-coding downstream 111200 24100450 ~ 24100867 (-)
G31072 NA non-coding downstream 175316 24036349 ~ 24036751 (-)
G31064 NA non-coding downstream 204865 24006244 ~ 24007202 (-)
G31109 LOC107656690 non-coding upstream 34264 24249836 ~ 24426069 (-)
G31115 NA non-coding upstream 83208 24298780 ~ 24540339 (-)
G31127 NA non-coding upstream 89683 24305255 ~ 24312292 (-)
LOC122343180 NA non-coding upstream 98218 24313790 ~ 24314321 (-)
G31142 NA non-coding upstream 116305 24331877 ~ 24332563 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other downstream 101394 24110224 ~ 24110673 (-)
G31050 NA other downstream 440299 23745486 ~ 23771768 (-)
G31017 NA other downstream 665698 23478525 ~ 23546369 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other downstream 775052 23416891 ~ 23437015 (-)
G30457 NA other downstream 1995597 22216035 ~ 22216470 (-)
G31134 NA other upstream 88524 24304096 ~ 24497596 (-)
G31120 NA other upstream 90929 24306501 ~ 24495178 (-)
LOC122342340 NA other upstream 108398 24323970 ~ 24327263 (-)
LOC122342407 LOC101068103,LOC105418166,LOC106522608,LOC108412963,LOC105419408,LOC108431938,LOC107395447,LOC106674638 other upstream 538484 24754056 ~ 24760786 (-)
G31314 NA other upstream 1343468 25559040 ~ 25561198 (-)

Expression


Co-expression Network