LOC122343175


Basic Information

Item Value
gene id LOC122343175
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 19369771 ~ 19371889 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250695.1
tgtgactctctcctgTCAGTTGTATTGTGATCTAATCTCTTGTGATTCTTTGGTCCGTGATGAAGTTCAGCTGATCTGGGTGAATCAGTTTGGTGTGAATCTACAGACAGACTCCAGATATCAGATCTCATTCTCCTCAGAACACTGTAACATCTCTCTGACTACAAAACTCCAGAATGAAGATCTCAACAGAGAGTGGAGATGTGAGGTTACTCAGAGAAATCAACCGAAGACCTCGGTCACGTATACTGTCAAGTATTCAgCTGCAGTCGATTCAACAAAACCGCTCCCAGTCAAGAATAAACCAAGACAAACTACACGACCAGCTGCAGTCGATTCAACAAAACCGATTCCAGTCAGCAGCTCCGAGAAGAAACCAAGACAAACTAAACCAGCA

Function

GO:

id name namespace
GO:0051147 regulation of muscle cell differentiation biological_process
GO:0051149 positive regulation of muscle cell differentiation biological_process
GO:0051153 regulation of striated muscle cell differentiation biological_process
GO:0051155 positive regulation of striated muscle cell differentiation biological_process
GO:0045597 positive regulation of cell differentiation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250695.1 True 397 lncRNA 0.44 3 19369771 19371889

Neighbor

gene id symbol gene type direction distance location
LOC122342242 NA coding upstream 101721 19265355 ~ 19268050 (+)
LOC122342239 NA coding upstream 219136 19147001 ~ 19150635 (+)
LOC122342238 NA coding upstream 301888 19064025 ~ 19067883 (+)
LOC122342236 NA coding upstream 406797 18960662 ~ 18962974 (+)
LOC122343037 LOC107698808,LOC107743352 coding upstream 416172 18950727 ~ 18953599 (+)
LOC122342246 NA coding downstream 73672 19445561 ~ 19449833 (+)
LOC122342253 NA coding downstream 332010 19703899 ~ 19706327 (+)
LOC122342262 NA coding downstream 671866 20043755 ~ 20045999 (+)
trnam-cau_2 NA coding downstream 690765 20062654 ~ 20062727 (+)
trnam-cau_3 NA coding downstream 692673 20064562 ~ 20064635 (+)
G29809 NA non-coding upstream 289582 19079768 ~ 19080189 (+)
G29803 NA non-coding upstream 316357 19045710 ~ 19053414 (+)
G29797 NA non-coding upstream 402057 18967387 ~ 18967714 (+)
G29777 NA non-coding upstream 437081 18932319 ~ 18932690 (+)
LOC122343164 NA non-coding upstream 461947 18903235 ~ 18907824 (+)
LOC122343189 NA non-coding downstream 34014 19405903 ~ 19406459 (+)
LOC122343198 NA non-coding downstream 42572 19414461 ~ 19414983 (+)
LOC122343203 NA non-coding downstream 141184 19513073 ~ 19513595 (+)
G29831 NA non-coding downstream 314968 19686857 ~ 19692608 (+)
G29844 NA non-coding downstream 498531 19870420 ~ 19870915 (+)
G29814 LOC107660256 other upstream 26860 19290220 ~ 19342911 (+)
G29642 NA other upstream 483369 18883179 ~ 18886402 (+)
G29545 NA other upstream 908454 18436460 ~ 18461317 (+)
G29526 NA other upstream 1068582 18300415 ~ 18301189 (+)
atp5mj NA other upstream 2328941 17038419 ~ 17040830 (+)
G29835 NA other downstream 359373 19731262 ~ 19786128 (+)
LOC122343071 NA other downstream 373845 19745734 ~ 19750074 (+)
LOC122343063 NA other downstream 666044 20037933 ~ 20043453 (+)
LOC122342270 NA other downstream 972457 20344346 ~ 20346724 (+)
G29921 NA other downstream 995786 20367675 ~ 20368816 (+)

Expression


Co-expression Network